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KM983327.1__AJA42528.1__phiCT453A_38__00038
Bact-VirKM983327.1__AJA42528.1__phiCT453A_38__00038
Identity
- Accession:
- KM983327 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-85
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.67 | 42.0 | 4.19e-01 | 70.2% | 59.6% |
| 4h61A00 | 3.10.450.580 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mediator complex, subunit Med6 | 0.65 | 50.0 | 4.27e-01 | 83.3% | 73.0% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.64 | 49.0 | 3.29e-01 | 82.1% | 52.0% |
| 5flwA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.64 | 48.0 | 3.30e-01 | 79.8% | 49.0% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.64 | 41.0 | 4.05e-01 | 72.6% | 61.8% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.63 | 43.0 | 3.61e-01 | 70.2% | 42.9% |
| 4ogcA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.61 | 43.0 | 3.24e-01 | 72.6% | 88.6% |
| 3kg6C00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.59 | 46.0 | 3.21e-01 | 84.5% | 41.9% |
| 6obtA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.58 | 42.0 | 2.97e-01 | 76.2% | 41.0% |
| 4ffgA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 43.0 | 2.96e-01 | 79.8% | 37.4% |
| 2ichA02 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.58 | 39.0 | 3.36e-01 | 71.4% | 43.8% |
| 5mqrA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 42.0 | 2.79e-01 | 79.8% | 37.5% |
| 1kcfB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 42.0 | 3.19e-01 | 82.1% | 86.8% |
| 4e19A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 38.0 | 3.26e-01 | 70.2% | 91.0% |
| 3k1lA01 | 3.30.457.40 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.55 | 37.0 | 3.68e-01 | 73.8% | 64.1% |
| 4oocA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.55 | 41.0 | 2.96e-01 | 82.1% | 78.0% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 38.0 | 3.06e-01 | 71.4% | 82.0% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 38.0 | 3.20e-01 | 75.0% | 41.2% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 38.0 | 3.24e-01 | 75.0% | 49.3% |
| 1vi7A01 | 3.30.230.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain | 0.52 | 35.0 | 3.03e-01 | 73.8% | 43.0% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.52 | 39.0 | 3.32e-01 | 81.0% | 87.4% |
| 2cm4A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 35.0 | 2.99e-01 | 71.4% | 77.9% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3168944 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.69 | 52.0 | 3.28e-01 | 79.8% | 78.3% |
| 3304580 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.69 | 50.0 | 4.01e-01 | 76.2% | 96.2% |
| 3819875 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.68 | 50.0 | 3.33e-01 | 77.4% | 31.5% |
| 3976796 | 244.3.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › GutM | 0.65 | 44.0 | 4.21e-01 | 71.4% | 59.6% |
| 4954830 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.64 | 45.0 | 3.40e-01 | 72.6% | 80.0% |
| 3823242 | 216.1.1.5 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › BRE | 0.63 | 44.0 | 3.95e-01 | 73.8% | 53.3% |
| 3821077 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 43.0 | 2.86e-01 | 72.6% | 24.8% |
| 5063764 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.62 | 43.0 | 3.31e-01 | 72.6% | 81.6% |
| 5037605 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.62 | 43.0 | 3.24e-01 | 72.6% | 76.4% |
| 3255634 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 50.0 | 3.22e-01 | 91.7% | 42.0% |
| 3804776 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.61 | 46.0 | 3.12e-01 | 81.0% | 35.8% |
| 3959060 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.60 | 41.0 | 3.31e-01 | 71.4% | 98.3% |
| 3519601 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.60 | 44.0 | 3.94e-01 | 78.6% | 54.2% |
| 3266323 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.60 | 45.0 | 3.98e-01 | 78.6% | 78.3% |
| 5049570 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.60 | 47.0 | 3.45e-01 | 85.7% | 30.9% |
| 3491456 | 3369.1.1.0 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 | 0.60 | 46.0 | 3.79e-01 | 81.0% | 73.3% |
| 3355790 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.60 | 40.0 | 3.43e-01 | 70.2% | 88.8% |
| 6323 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.59 | 40.0 | 3.45e-01 | 81.0% | 41.8% |
| 3584129 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.59 | 51.0 | 3.16e-01 | 97.6% | 32.8% |
| 4992208 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.59 | 48.0 | 3.50e-01 | 91.7% | 40.8% |
| 3675483 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 44.0 | 2.81e-01 | 79.8% | 51.2% |
| 2559760 | 216.1.1.5 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › BRE | 0.58 | 42.0 | 3.80e-01 | 77.4% | 71.1% |
| 3478745 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.58 | 43.0 | 3.50e-01 | 81.0% | 67.3% |
| 3914464 | 11.1.1.562 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BTBD16_C | 0.57 | 41.0 | 3.48e-01 | 75.0% | 53.6% |
| 3956719 | 4252.1.1.14 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › PF30556 | 0.57 | 41.0 | 3.27e-01 | 77.4% | 96.6% |
| 4984221 | 5.1.8.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 | 0.56 | 41.0 | 3.54e-01 | 79.8% | 95.2% |
| 3597697 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.56 | 43.0 | 3.39e-01 | 86.9% | 96.0% |
| 3512529 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.55 | 42.0 | 3.49e-01 | 83.3% | 65.6% |
| 3257727 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 47.0 | 4.14e-01 | 97.6% | 75.4% |
| 4981911 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.55 | 40.0 | 2.98e-01 | 82.1% | 27.5% |
| 3421524 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 46.0 | 2.99e-01 | 92.9% | 89.7% |
| 4939146 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 42.0 | 2.81e-01 | 84.5% | 48.2% |
| 3972133 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.54 | 41.0 | 3.08e-01 | 85.7% | 29.6% |
| 3508960 | 5.1.3.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_HCF, Beta-prop_ATRN-LZTR1 | 0.54 | 43.0 | 2.91e-01 | 91.7% | 52.7% |
| 3262671 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 39.0 | 2.30e-01 | 77.4% | 13.8% |
| 1569520 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.53 | 42.0 | 3.13e-01 | 91.7% | 36.8% |
| 3520453 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 36.0 | 3.13e-01 | 70.2% | 84.6% |
| 4975236 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.52 | 36.0 | 3.97e-01 | 70.2% | 100.0% |
| 3894256 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.52 | 36.0 | 2.96e-01 | 72.6% | 85.5% |
| 3218203 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 36.0 | 2.98e-01 | 71.4% | 85.2% |
| 3719938 | 227.1.1.17 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N | 0.52 | 36.0 | 3.08e-01 | 72.6% | 97.1% |
| 3464481 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.51 | 38.0 | 2.54e-01 | 81.0% | 30.1% |
| 3471680 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 38.0 | 3.22e-01 | 86.9% | 48.6% |
| 4559690 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.50 | 38.0 | 3.09e-01 | 81.0% | 98.1% |