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KM983327.1__AJA42551.1__phiCT453A_61__00061
Bact-VirKM983327.1__AJA42551.1__phiCT453A_61__00061
Identity
- Accession:
- KM983327 ↗
- Kingdom:
- phage
Quality
69.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-149
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20505.4 best | DUF6731 | 34.5 | 2.30e-08 | 100.0% | 40.7% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 29.0 | 4.03e-01 | 89.6% | 98.4% |
| 3fruA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 32.0 | 3.04e-01 | 86.8% | 48.6% |
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 22.0 | 3.17e-01 | 77.1% | 87.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047887 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.67 | 42.0 | 3.69e-01 | 93.8% | 42.9% |
| 3899940 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.65 | 31.0 | 4.11e-01 | 90.3% | 82.5% |
| 3852438 | 883.1.1.24 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF29321 | 0.61 | 44.0 | 4.08e-01 | 87.5% | 58.9% |
| 4997345 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.59 | 44.0 | 4.72e-01 | 93.8% | 89.6% |
| 3206015 | 304.100.1.2 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › FGAR-AT_N | 0.55 | 38.0 | 3.80e-01 | 71.5% | 95.5% |
| 4503569 | 5.1.7.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › BNR, Sortilin-Vps10 | 0.52 | 40.0 | 2.68e-01 | 79.9% | 27.0% |
| 3699761 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 43.0 | 3.71e-01 | 99.3% | 58.2% |
D2
high
residues 172-265