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KM983328.1__AJA42570.1__phiCT453B_18__00018
Bact-VirKM983328.1__AJA42570.1__phiCT453B_18__00018
Identity
- Accession:
- KM983328 ↗
- Kingdom:
- phage
Quality
80.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-57
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tfiA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.70 | 53.0 | 3.13e-01 | 100.0% | 11.1% |
| 2ox7A01 | 2.30.30.310 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.68 | 50.0 | 4.77e-01 | 80.4% | 82.3% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.68 | 48.0 | 4.09e-01 | 100.0% | 45.3% |
| 1a1rA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 50.0 | 4.26e-01 | 100.0% | 49.4% |
| 3girA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.64 | 44.0 | 3.92e-01 | 100.0% | 48.7% |
| 1arbA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 51.0 | 3.95e-01 | 100.0% | 95.1% |
| 3iwcB00 | 3.30.360.110 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › S-adenosylmethionine decarboxylase domain | 0.57 | 40.0 | 3.82e-01 | 100.0% | 62.3% |
| 1agjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 45.0 | 3.53e-01 | 100.0% | 88.1% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 48.0 | 4.28e-01 | 100.0% | 68.1% |
| 3pp9B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 42.0 | 3.03e-01 | 94.1% | 80.5% |
| 2rblA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 30.0 | 3.28e-01 | 70.6% | 85.7% |
| 2jtdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 2.66e-01 | 100.0% | 28.7% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.52 | 42.0 | 3.09e-01 | 98.0% | 58.8% |
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.51 | 42.0 | 3.23e-01 | 100.0% | 52.5% |
| 5mz2I00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.51 | 42.0 | 3.17e-01 | 96.1% | 43.2% |
| 3cr8A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.51 | 40.0 | 3.03e-01 | 100.0% | 33.3% |
| 4d4iA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 39.0 | 2.46e-01 | 98.0% | 84.6% |
| 3etcA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.50 | 40.0 | 2.45e-01 | 100.0% | 80.9% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.50 | 41.0 | 3.11e-01 | 100.0% | 64.6% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3952346 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.65 | 48.0 | 3.59e-01 | 100.0% | 29.7% |
| 3325850 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 40.0 | 2.78e-01 | 80.4% | 18.3% |
| 5026596 | 327.11.1.7 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd | 0.61 | 43.0 | 4.27e-01 | 88.2% | 70.9% |
| 5055839 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.60 | 45.0 | 3.57e-01 | 100.0% | 38.2% |
| 4040055 | 4.26.1.1 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 | 0.60 | 46.0 | 4.45e-01 | 92.2% | 74.1% |
| 1144813 | 4.1.1.107 ↗ | beta barrels › SH3 › SH3 › SH3 › XRN1_D1 | 0.58 | 41.0 | 2.97e-01 | 80.4% | 83.6% |
| 3999482 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.56 | 51.0 | 3.92e-01 | 100.0% | 69.1% |
| 5042797 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.56 | 41.0 | 4.01e-01 | 100.0% | 71.7% |
| 3491281 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.56 | 43.0 | 3.07e-01 | 100.0% | 26.7% |
| 4849375 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.54 | 44.0 | 4.39e-01 | 92.2% | 92.6% |
| 4943413 | 3124.1.1.0 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain | 0.54 | 36.0 | 3.72e-01 | 76.5% | 82.2% |
| 3915831 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 39.0 | 3.14e-01 | 86.3% | 56.0% |
| 3402496 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.53 | 44.0 | 2.87e-01 | 92.2% | 40.0% |
| 4197235 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.51 | 40.0 | 3.49e-01 | 100.0% | 52.6% |
| 4863653 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.73e-01 | 96.1% | 82.1% |
| 3485387 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 38.0 | 3.41e-01 | 94.1% | 56.0% |
| 5054112 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 3.89e-01 | 96.1% | 84.6% |
| 3510186 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.51 | 38.0 | 3.40e-01 | 100.0% | 51.6% |
| 5064178 | 1.1.13.73 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PUA | 0.51 | 39.0 | 3.81e-01 | 100.0% | 75.0% |
| 4798268 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.50 | 42.0 | 2.83e-01 | 100.0% | 42.4% |
| 3716046 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.50 | 35.0 | 2.05e-01 | 76.5% | 8.0% |
| 3606476 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.50 | 38.0 | 3.76e-01 | 100.0% | 81.8% |