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KM983329.1__AJA42618.1__phiCT9441A_05__00005

Bact-Vir

KM983329.1__AJA42618.1__phiCT9441A_05__00005

Identity

Accession:
KM983329 ↗
Kingdom:
phage

Quality

73.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-55
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 67.0 5.65e-01 100.0% 52.3%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 77.0 6.10e-01 100.0% 51.5%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 74.0 6.82e-01 100.0% 75.4%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 75.0 6.69e-01 100.0% 70.7%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 74.0 6.89e-01 100.0% 78.8%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 75.0 6.19e-01 100.0% 63.4%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 71.0 6.28e-01 100.0% 65.8%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 75.0 6.81e-01 100.0% 74.6%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 73.0 6.47e-01 100.0% 67.5%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 73.0 6.93e-01 100.0% 82.5%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 71.0 6.56e-01 96.2% 75.8%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 72.0 6.51e-01 100.0% 73.6%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 72.0 6.40e-01 100.0% 68.8%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 72.0 6.15e-01 100.0% 64.7%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 71.0 6.39e-01 100.0% 73.0%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 71.0 6.46e-01 100.0% 74.3%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 71.0 6.23e-01 100.0% 69.6%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 65.0 6.65e-01 98.1% 94.1%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 69.0 6.43e-01 100.0% 78.8%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 70.0 6.13e-01 100.0% 65.4%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 69.0 5.86e-01 100.0% 58.9%
4jcyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 69.0 5.80e-01 100.0% 60.9%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 69.0 6.03e-01 100.0% 72.0%
2d5vA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 69.0 6.05e-01 100.0% 74.7%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 65.0 5.62e-01 100.0% 59.5%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 68.0 6.38e-01 100.0% 84.4%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.76 66.0 6.29e-01 100.0% 85.7%
1rzsA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 57.0 5.53e-01 100.0% 73.8%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 64.0 5.66e-01 100.0% 64.6%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 63.0 5.94e-01 100.0% 77.9%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 62.0 5.97e-01 100.0% 83.3%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 62.0 5.58e-01 100.0% 72.4%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 61.0 5.63e-01 100.0% 74.3%
1vpwA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 50.0 4.96e-01 73.6% 68.4%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 63.0 5.95e-01 100.0% 84.6%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 60.0 5.36e-01 100.0% 65.8%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 59.0 5.59e-01 100.0% 83.1%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.01e-01 94.3% 83.0%
4dhiB02 1.20.1300.20 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 0.56 46.0 3.49e-01 100.0% 37.9%
4i3vA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.55 45.0 3.02e-01 100.0% 53.9%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.54 42.0 3.63e-01 100.0% 74.3%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4942426 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 80.0 7.45e-01 100.0% 78.5%
5030212 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.90 81.0 7.32e-01 100.0% 74.3%
3952098 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 81.0 7.00e-01 100.0% 66.3%
5057414 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 77.0 7.02e-01 100.0% 72.9%
5027582 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 77.0 6.66e-01 100.0% 63.7%
4978931 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.88 81.0 7.27e-01 100.0% 75.7%
5061120 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 77.0 6.37e-01 100.0% 56.7%
4935348 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 80.0 6.90e-01 100.0% 66.3%
4979598 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 78.0 7.08e-01 100.0% 75.7%
4945219 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.86 74.0 7.13e-01 100.0% 85.0%
4038777 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 76.0 6.18e-01 100.0% 54.7%
3979332 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 77.0 7.43e-01 100.0% 88.3%
1772495 10.12.1.118 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30252 0.85 67.0 4.33e-01 100.0% 20.5%
4084920 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.85 76.0 6.92e-01 100.0% 75.7%
4061717 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.84 76.0 6.02e-01 100.0% 51.4%
5050179 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 73.0 7.07e-01 100.0% 86.7%
3588243 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 75.0 7.19e-01 100.0% 90.0%
4507416 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 74.0 5.82e-01 100.0% 48.2%
None 0.83 73.0 6.51e-01 100.0% 70.7%
3588951 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 74.0 7.11e-01 100.0% 88.3%
5028710 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.82 72.0 6.45e-01 100.0% 74.7%
4967965 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 71.0 6.43e-01 100.0% 72.9%
4114937 101.1.4.5 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HNF-1_N 0.82 73.0 5.63e-01 100.0% 46.1%
4405465 101.1.4.5 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HNF-1_N 0.81 73.0 5.88e-01 100.0% 53.0%
2888862 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.81 72.0 6.70e-01 100.0% 81.8%
5013314 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 72.0 6.97e-01 100.0% 88.3%
2813240 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 71.0 6.46e-01 100.0% 73.6%
2775 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 71.0 6.12e-01 100.0% 63.4%
4031703 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.81 71.0 6.50e-01 100.0% 77.1%
3278834 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 72.0 6.55e-01 100.0% 77.1%
3974103 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.80 71.0 6.06e-01 100.0% 68.2%
3231460 101.1.4.5 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HNF-1_N 0.80 70.0 5.72e-01 100.0% 55.0%
3287413 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 70.0 6.12e-01 100.0% 66.3%
3963429 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.79 69.0 6.83e-01 100.0% 94.5%
4678741 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 69.0 6.16e-01 100.0% 72.0%
3306298 101.1.4.53 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF29035 0.78 69.0 6.61e-01 100.0% 86.7%
3288847 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.78 67.0 6.05e-01 100.0% 72.0%
3972740 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.78 66.0 6.26e-01 100.0% 80.0%
3166016 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.77 69.0 6.63e-01 100.0% 90.0%
3985846 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 67.0 5.67e-01 100.0% 64.4%
5009786 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 66.0 5.43e-01 100.0% 55.0%
3958941 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 64.0 5.72e-01 100.0% 65.0%
3288109 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 64.0 5.99e-01 100.0% 77.1%
4022186 101.1.4.58 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF7726 0.75 66.0 6.36e-01 100.0% 95.0%
4997274 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 63.0 4.44e-01 100.0% 29.7%
3947056 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 61.0 5.65e-01 100.0% 71.4%
3973014 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 63.0 5.94e-01 100.0% 80.0%
3949869 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 64.0 5.92e-01 100.0% 75.7%
4994602 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 62.0 6.04e-01 100.0% 86.7%
2647253 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 60.0 5.44e-01 100.0% 66.7%
4955745 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 62.0 5.88e-01 100.0% 80.0%
3589516 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.72 60.0 5.59e-01 100.0% 74.3%
3999292 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.71 59.0 5.19e-01 100.0% 61.2%
3977908 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.71 60.0 5.09e-01 100.0% 56.8%
3983992 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.70 58.0 5.22e-01 100.0% 70.0%
2791 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.70 59.0 5.08e-01 100.0% 60.7%
3965368 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.70 58.0 5.19e-01 100.0% 70.0%
3588628 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 57.0 5.61e-01 100.0% 94.8%
3593198 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.67 53.0 5.38e-01 100.0% 98.0%
3612783 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.63 54.0 4.32e-01 100.0% 80.0%
3374351 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.61 41.0 4.19e-01 71.7% 74.0%
4264297 101.1.2.760 alpha arrays › HTH › HTH › winged helix domain › PF30824 0.59 41.0 3.17e-01 75.5% 32.6%
4383273 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.57 46.0 3.47e-01 90.6% 51.1%
2970332 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.55 42.0 3.30e-01 94.3% 59.4%
5062159 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.52 42.0 4.16e-01 100.0% 93.3%
3326345 152.1.2.0 alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit 0.51 43.0 4.31e-01 100.0% 96.4%
D2 high residues 89-149
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF13560.13 best HTH_31 37.5 3.40e-09 95.1% 82.8%
PF13443.13 HTH_26 27.1 5.40e-06 93.4% 84.1%
PF01381.29 HTH_3 55.0 9.60e-15 91.8% 100.0%
D3 high residues 187-248
PDB