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KM983332.1__AJA42861.1__phiCT19406C_38__00038

Bact-Vir

KM983332.1__AJA42861.1__phiCT19406C_38__00038

Identity

Accession:
KM983332 ↗
Kingdom:
phage

Quality

79.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_phiCT19406C

TaxID: 1567011

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 132-143_182-375
PDB
Domain cluster: rep: term1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00252__D266-434_458-483
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF05065.20 best Phage_capsid 78.2 1.00e-21 96.1% 74.0%
PF25209.3 Phage_capsid_4 29.7 1.20e-06 94.7% 91.3%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bjqA00 3.90.1690.10 Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain 0.77 72.0 6.30e-01 100.0% 91.6%
1jw3A00 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.70 29.0 3.49e-01 97.6% 55.7%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.67 27.0 3.51e-01 90.8% 63.9%
3qkbA00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.65 31.0 4.42e-01 95.1% 96.8%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 19.0 2.97e-01 90.8% 61.7%
1ohgA01 3.30.2400.10 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › Major capsid protein gp5 0.63 43.0 5.17e-01 94.7% 98.6%
6i9gA01 3.30.2400.30 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › 0.57 37.0 4.12e-01 94.2% 80.5%
4oifA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 15.0 2.71e-01 87.9% 80.6%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3946670 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.88 85.0 7.58e-01 100.0% 87.3%
4031028 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.87 84.0 7.40e-01 100.0% 82.5%
2651377 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.86 83.0 7.15e-01 100.0% 88.9%
4929755 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.85 81.0 7.25e-01 100.0% 88.4%
4241362 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.85 81.0 7.05e-01 100.0% 91.2%
2989340 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.84 81.0 6.82e-01 100.0% 89.8%
3088027 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.84 81.0 7.29e-01 100.0% 90.3%
4313471 2485.3.1.11 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like 0.84 80.0 6.94e-01 100.0% 86.7%
3963274 2485.3.1.9 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.83 79.0 6.32e-01 98.5% 99.5%
4890673 2485.3.1.9 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.83 80.0 6.50e-01 100.0% 90.8%
2989372 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.83 80.0 6.84e-01 100.0% 90.1%
3952452 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.83 79.0 6.91e-01 100.0% 87.7%
5081487 2485.3.1.10 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF5309 0.83 79.0 7.06e-01 100.0% 99.3%
3949155 2485.3.1.11 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like 0.82 78.0 7.12e-01 100.0% 90.6%
2989506 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.82 79.0 6.83e-01 100.0% 95.3%
5080806 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.82 78.0 6.89e-01 100.0% 98.9%
2995325 2485.3.1.9 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.82 78.0 6.28e-01 100.0% 89.4%
3110786 2485.3.1.14 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp10A-like 0.82 78.0 6.43e-01 100.0% 86.0%
3075730 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.82 78.0 6.55e-01 100.0% 87.5%
4988094 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.82 78.0 7.18e-01 100.0% 91.0%
2842229 2485.3.1.9 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.82 77.0 6.26e-01 100.0% 91.2%
2988313 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.81 78.0 7.01e-01 100.0% 90.8%
3583655 2485.3.1.5 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp23 0.81 77.0 6.49e-01 100.0% 90.9%
2989356 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.80 77.0 6.68e-01 100.0% 91.5%
2639625 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.80 76.0 6.79e-01 100.0% 88.6%
3090875 2485.3.1.14 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp10A-like 0.80 77.0 6.58e-01 100.0% 93.4%
3942344 2485.3.1.19 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › PF30928 0.80 76.0 6.58e-01 100.0% 89.4%
2538948 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.80 75.0 6.55e-01 100.0% 88.3%
2989363 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.79 74.0 6.39e-01 100.0% 90.9%
4884207 2485.3.1.7 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside 0.79 74.0 6.52e-01 99.5% 90.3%
3944238 2485.3.1.7 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside 0.78 75.0 6.60e-01 100.0% 97.5%
1877546 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.78 74.0 6.40e-01 100.0% 90.7%
2968064 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.78 74.0 6.10e-01 100.0% 92.2%
1005479 2485.3.1.1 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E 0.78 74.0 6.08e-01 100.0% 92.2%
5081698 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.77 73.0 6.33e-01 100.0% 91.1%
3965498 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.77 74.0 6.20e-01 100.0% 91.7%
3513770 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.77 73.0 6.35e-01 99.5% 93.0%
333200 2485.3.1.1 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E 0.77 73.0 6.30e-01 100.0% 91.4%
5083051 2485.3.1.12 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF6260 0.77 73.0 6.42e-01 100.0% 92.4%
3977985 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.77 73.0 6.01e-01 100.0% 75.0%
194954 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.77 72.0 6.89e-01 99.0% 91.1%
2806362 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.77 73.0 6.61e-01 100.0% 86.8%
2899245 2485.3.1.10 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF5309 0.77 73.0 5.99e-01 100.0% 90.2%
4954548 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.76 74.0 6.55e-01 100.0% 93.5%
2995627 2485.3.1.7 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside 0.76 72.0 6.23e-01 100.0% 90.3%
5083079 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.76 72.0 6.06e-01 100.0% 82.2%
2640765 2485.3.1.1 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E 0.75 71.0 5.84e-01 100.0% 93.5%
4955362 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.75 71.0 6.75e-01 99.0% 93.6%
3501742 2485.3.1.21 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phi29_MCP 0.75 70.0 6.05e-01 99.0% 92.9%
5083777 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.75 71.0 6.16e-01 100.0% 87.0%
4991535 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.75 70.0 6.58e-01 99.0% 89.8%
3587769 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.73 69.0 6.11e-01 100.0% 89.3%
3977525 2485.3.1.4 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_P2 0.73 68.0 5.74e-01 100.0% 86.8%
2831773 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.72 67.0 6.13e-01 100.0% 87.6%
2724409 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.71 67.0 6.12e-01 100.0% 87.5%
3277785 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.70 66.0 6.07e-01 99.0% 87.7%
3588084 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.70 66.0 5.68e-01 99.5% 87.5%
4995674 2485.3.1.5 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp23 0.70 67.0 6.11e-01 100.0% 86.8%
2553816 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.70 65.0 5.94e-01 99.5% 87.5%
3700802 304.20.1.0 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain 0.64 30.0 3.49e-01 92.2% 60.0%
3275694 872.3.1.6 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_3 0.62 31.0 4.29e-01 96.6% 97.0%
3164700 2485.3.1.15 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Mu-like_gpT 0.61 52.0 4.63e-01 100.0% 65.0%
3613135 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 24.0 3.38e-01 90.8% 75.0%
3026399 3555.1.1.1 ↗ a+b three layers › Major capsid protein GP7 › Major capsid protein GP7 › Major capsid protein GP7 › GP7 0.57 54.0 4.43e-01 98.1% 88.3%
D2 medium residues 3-111
PDB