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KP063902.1__AJA42436.1__BalMu1_A2__00002
Bact-VirKP063902.1__AJA42436.1__BalMu1_A2__00002
Identity
- Accession:
- KP063902 ↗
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-62
Domain cluster:
rep: KT187252.1__ALA07684.1__PBC6_091__00090__D62-118
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c12A01 | 2.30.30.910 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 52.0 | 5.56e-01 | 96.7% | 94.1% |
| 2ol5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 55.0 | 3.95e-01 | 90.0% | 79.8% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.68 | 52.0 | 4.36e-01 | 88.3% | 49.5% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 51.0 | 5.07e-01 | 91.7% | 92.1% |
| 3pufL00 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 45.0 | 3.69e-01 | 76.7% | 62.9% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 52.0 | 4.39e-01 | 100.0% | 95.5% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 45.0 | 4.18e-01 | 81.7% | 97.5% |
| 2cofA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 46.0 | 3.94e-01 | 86.7% | 69.2% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 41.0 | 4.57e-01 | 85.0% | 100.0% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.60 | 41.0 | 3.21e-01 | 73.3% | 92.1% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 49.0 | 4.42e-01 | 95.0% | 74.4% |
| 4hwiB01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 44.0 | 4.22e-01 | 81.7% | 97.2% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 47.0 | 4.25e-01 | 96.7% | 71.4% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 4.39e-01 | 80.0% | 93.8% |
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.58 | 45.0 | 3.67e-01 | 88.3% | 43.7% |
| 1l5pA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.57 | 43.0 | 3.72e-01 | 80.0% | 100.0% |
| 1ntvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 42.0 | 3.29e-01 | 83.3% | 65.8% |
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 42.0 | 3.88e-01 | 81.7% | 97.6% |
| 1wxvA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 42.0 | 3.92e-01 | 80.0% | 97.4% |
| 1ztmA01 | 2.40.490.10 | Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain | 0.57 | 43.0 | 3.59e-01 | 83.3% | 61.1% |
| 2psbA00 | 3.50.90.10 | Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like | 0.56 | 45.0 | 3.02e-01 | 95.0% | 83.1% |
| 1o70A02 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.55 | 44.0 | 3.36e-01 | 91.7% | 39.1% |
| 4i1kA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.55 | 46.0 | 3.77e-01 | 96.7% | 55.1% |
| 1iv8A02 | 3.30.1590.10 | Alpha Beta › 2-Layer Sandwich › Maltooligosyl trehalose synthase, domain 2 › Maltooligosyl trehalose synthase, domain 2 | 0.55 | 38.0 | 3.07e-01 | 71.7% | 47.5% |
| 3w1yB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 40.0 | 3.49e-01 | 83.3% | 73.1% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 47.0 | 3.74e-01 | 100.0% | 87.2% |
| 1itvA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.54 | 44.0 | 3.16e-01 | 95.0% | 37.4% |
| 3n6rA03 | 3.30.700.30 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.54 | 43.0 | 3.47e-01 | 95.0% | 75.2% |
| 2gtiA01 | 3.30.160.820 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like | 0.54 | 40.0 | 3.94e-01 | 81.7% | 93.8% |
| 1dgjA01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.53 | 39.0 | 3.70e-01 | 81.7% | 98.6% |
| 4r8tB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 44.0 | 4.18e-01 | 98.3% | 89.0% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.52 | 40.0 | 3.56e-01 | 88.3% | 58.0% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 41.0 | 2.70e-01 | 93.3% | 22.5% |
| 3td9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 37.0 | 2.78e-01 | 76.7% | 92.7% |
| 7asgA02 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.51 | 37.0 | 3.12e-01 | 96.7% | 42.0% |
| 2f20A00 | 3.90.1680.10 | Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like | 0.50 | 41.0 | 2.86e-01 | 95.0% | 58.8% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945344 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 62.0 | 3.88e-01 | 100.0% | 52.0% |
| 4607208 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.68 | 52.0 | 4.11e-01 | 93.3% | 40.7% |
| 3963913 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 48.0 | 3.83e-01 | 90.0% | 86.4% |
| 4034335 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.60 | 48.0 | 3.94e-01 | 93.3% | 48.2% |
| 4026161 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.59 | 50.0 | 4.01e-01 | 96.7% | 52.0% |
| 4203006 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.59 | 50.0 | 4.14e-01 | 96.7% | 65.5% |
| 4975714 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 48.0 | 4.97e-01 | 93.3% | 100.0% |
| 4962921 | 1.1.11.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › DUF7112 | 0.59 | 49.0 | 3.94e-01 | 96.7% | 64.8% |
| 4031510 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 48.0 | 4.28e-01 | 95.0% | 73.3% |
| 5034643 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.58 | 44.0 | 3.96e-01 | 85.0% | 96.6% |
| 3604240 | 71.1.1.25 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF6612 | 0.57 | 49.0 | 3.44e-01 | 100.0% | 91.9% |
| 3244166 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 43.0 | 2.84e-01 | 83.3% | 29.8% |
| 3661948 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.56 | 46.0 | 4.36e-01 | 95.0% | 93.3% |
| 3406249 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 45.0 | 4.10e-01 | 93.3% | 96.5% |
| 3373520 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.56 | 46.0 | 3.74e-01 | 96.7% | 59.3% |
| 3248299 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.55 | 49.0 | 2.88e-01 | 100.0% | 45.7% |
| 3810698 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.55 | 47.0 | 4.14e-01 | 100.0% | 69.5% |
| 3661923 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.55 | 45.0 | 3.70e-01 | 95.0% | 56.7% |
| 3804424 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.55 | 46.0 | 3.73e-01 | 96.7% | 54.2% |
| 4478186 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 37.0 | 4.07e-01 | 78.3% | 97.8% |
| 3710391 | 5.1.4.661 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st | 0.54 | 44.0 | 2.89e-01 | 96.7% | 26.9% |
| 3264641 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.54 | 47.0 | 2.78e-01 | 100.0% | 45.0% |
| 4983892 | 221.1.1.48 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2_4 | 0.54 | 41.0 | 3.64e-01 | 83.3% | 84.4% |
| 3964595 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.54 | 41.0 | 3.77e-01 | 86.7% | 96.5% |
| 3740340 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.54 | 42.0 | 3.95e-01 | 91.7% | 93.8% |
| 2095 | 4976.1.1.1 ↗ | beta sandwiches › C-terminal domain in YerB-like proteins › C-terminal domain in YerB-like proteins › C-terminal domain in YerB-like proteins › DUF3048_C | 0.54 | 44.0 | 3.54e-01 | 95.0% | 45.4% |
| 3230771 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.54 | 41.0 | 3.73e-01 | 90.0% | 78.9% |
| 4598583 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.53 | 42.0 | 3.11e-01 | 91.7% | 33.3% |
| 3345450 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.53 | 44.0 | 3.63e-01 | 96.7% | 80.0% |
| 3825581 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.53 | 45.0 | 3.77e-01 | 96.7% | 64.2% |
| 4945089 | 3487.1.1.0 ↗ | a+b three layers › Integron cassette protein VCH_CASS3 › Integron cassette protein VCH_CASS3 › Integron cassette protein VCH_CASS3 | 0.52 | 38.0 | 3.25e-01 | 81.7% | 84.5% |
| 5062758 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 45.0 | 3.30e-01 | 100.0% | 75.0% |
| 3183936 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.52 | 36.0 | 2.88e-01 | 81.7% | 33.3% |
| 3802286 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.52 | 42.0 | 3.61e-01 | 100.0% | 62.7% |
| 3840630 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.51 | 43.0 | 2.76e-01 | 96.7% | 29.5% |
| 3309149 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.51 | 37.0 | 3.67e-01 | 83.3% | 92.3% |
| 3529004 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 41.0 | 2.65e-01 | 95.0% | 20.6% |
| 3808369 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.51 | 42.0 | 3.59e-01 | 100.0% | 62.0% |