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KP137435.1__AJA73027.1__587AP2_52__00052
Bact-VirKP137435.1__AJA73027.1__587AP2_52__00052
Identity
- Accession:
- KP137435 ↗
- Kingdom:
- phage
Quality
77.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-71
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 40.0 | 4.06e-01 | 86.6% | 63.6% |
| 4uvmA00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.61 | 52.0 | 3.15e-01 | 100.0% | 84.0% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 52.0 | 3.48e-01 | 100.0% | 24.7% |
| 3mzkB03 | 1.20.58.940 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 37.0 | 3.74e-01 | 80.6% | 61.4% |
| 5cr4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 39.0 | 2.77e-01 | 70.1% | 75.9% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 42.0 | 2.99e-01 | 80.6% | 61.1% |
| 2m4gA00 | 6.10.20.70 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.52 | 36.0 | 3.51e-01 | 92.5% | 65.3% |
| 6adqG01 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.51 | 42.0 | 3.17e-01 | 100.0% | 35.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5040031 | 632.22.1.199 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PLDc_N | 0.77 | 52.0 | 4.78e-01 | 70.1% | 61.2% |
| None | — | 0.60 | 49.0 | 2.97e-01 | 94.0% | 39.6% | |
| 3658301 | 3860.1.1.249 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › NFD4_C | 0.60 | 47.0 | 3.23e-01 | 98.5% | 25.5% |
| 3572331 | 386.1.1.225 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › BTB | 0.58 | 41.0 | 3.59e-01 | 82.1% | 49.0% |
| 3998654 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.55 | 47.0 | 3.60e-01 | 100.0% | 43.5% |