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KP137437.1__AJA73290.1__1152AP2_05__00005

Bact-Vir

KP137437.1__AJA73290.1__1152AP2_05__00005

Identity

Accession:
KP137437 ↗
Kingdom:
phage

Quality

93.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mannheimia_phage_vB_MhS_1152AP2

TaxID: 1572747

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-71
PDB
Domain cluster: rep: MK448944.1__QBX28407.1__Javan452_0036__00036__D4-63
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vhfB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 49.0 3.15e-01 87.0% 21.9%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 45.0 3.79e-01 88.4% 45.6%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 47.0 3.11e-01 87.0% 20.8%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 46.0 4.14e-01 82.6% 83.2%
1y0gA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.59 46.0 3.56e-01 88.4% 100.0%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 39.0 4.39e-01 84.1% 96.1%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 4.43e-01 84.1% 98.1%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.58 40.0 4.23e-01 85.5% 85.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 4.03e-01 92.8% 71.2%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.57 40.0 4.40e-01 94.2% 96.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.57 36.0 4.14e-01 84.1% 93.8%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 46.0 3.77e-01 91.3% 47.3%
3hjhA02 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.57 36.0 3.46e-01 78.3% 52.3%
4u3vA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.57 41.0 2.83e-01 76.8% 66.9%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 40.0 4.33e-01 94.2% 96.4%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 3.48e-01 76.8% 92.6%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.10e-01 84.1% 83.1%
7ctpA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 41.0 3.56e-01 85.5% 85.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 42.0 4.36e-01 87.0% 90.6%
3fqmA02 2.20.25.220 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C virus NS5A, 1B domain 0.54 46.0 4.26e-01 98.6% 74.4%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 34.0 3.88e-01 81.2% 91.8%
5ejrA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.90e-01 82.6% 83.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.54 35.0 3.82e-01 84.1% 90.4%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.53 33.0 3.65e-01 75.4% 91.3%
2psbA00 3.50.90.10 Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like 0.53 39.0 2.71e-01 84.1% 44.1%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.53 39.0 4.13e-01 84.1% 96.6%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 35.0 3.47e-01 85.5% 67.6%
6bg2A02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 44.0 3.71e-01 100.0% 83.2%
3o44A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 43.0 3.62e-01 97.1% 96.0%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 39.0 3.44e-01 85.5% 69.4%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.45e-01 91.3% 65.9%
4g59B00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.50 34.0 2.77e-01 73.9% 90.2%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3171144 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.63 48.0 3.02e-01 87.0% 15.2%
3964595 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.63 51.0 4.80e-01 89.9% 94.1%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 46.0 4.51e-01 89.9% 74.7%
3271365 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 44.0 2.80e-01 75.4% 19.1%
4025105 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.61 44.0 3.12e-01 78.3% 37.3%
3390473 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 46.0 4.05e-01 82.6% 73.3%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 41.0 4.51e-01 88.4% 89.1%
5077969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 41.0 3.94e-01 87.0% 61.3%
3577864 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.60 42.0 3.92e-01 94.2% 58.8%
3199259 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.60 39.0 4.07e-01 84.1% 72.3%
4890270 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 38.0 4.19e-01 84.1% 85.2%
3512402 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 42.0 2.74e-01 75.4% 21.8%
3516048 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 3.99e-01 98.6% 57.0%
3518844 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 42.0 4.01e-01 98.6% 63.5%
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 39.0 4.24e-01 89.9% 87.3%
3389169 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 43.0 4.10e-01 98.6% 65.9%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 38.0 3.60e-01 84.1% 54.1%
3550644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 40.0 4.34e-01 94.2% 92.7%
3768094 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 42.0 3.69e-01 98.6% 51.4%
4011774 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 44.0 3.14e-01 82.6% 51.9%
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 42.0 4.04e-01 98.6% 68.8%
423593 219.1.1.59 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Agglutinin_C 0.57 39.0 3.16e-01 85.5% 34.5%
3228278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 39.0 4.05e-01 89.9% 76.9%
3546607 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.57 37.0 4.08e-01 84.1% 90.0%
3171545 219.1.1.112 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.57 45.0 2.86e-01 87.0% 17.6%
185622 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.57 46.0 3.73e-01 91.3% 45.6%
3229601 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.57 38.0 3.99e-01 88.4% 80.0%
4147056 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 41.0 3.76e-01 98.6% 56.0%
3922679 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.56 36.0 4.01e-01 81.2% 90.0%
4044896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 41.0 4.09e-01 97.1% 76.0%
3233672 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.55 39.0 3.52e-01 85.5% 52.0%
3547084 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 41.0 3.85e-01 98.6% 63.3%
4942673 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.55 45.0 3.90e-01 100.0% 57.3%
3294392 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.55 39.0 3.73e-01 94.2% 62.4%
3398093 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.55 38.0 3.99e-01 89.9% 83.3%
3535278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 36.0 3.85e-01 84.1% 78.3%
3408327 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 40.0 3.73e-01 98.6% 62.2%
4580772 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 40.0 3.80e-01 98.6% 65.9%
3700770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 41.0 4.35e-01 94.2% 96.7%
3881123 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 40.0 3.76e-01 97.1% 65.9%
4002896 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.53 39.0 3.71e-01 98.6% 63.3%
4210485 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.53 39.0 4.04e-01 92.8% 86.2%
3517728 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.53 39.0 3.93e-01 100.0% 80.0%
3924213 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 38.0 3.54e-01 98.6% 60.0%
3920666 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 38.0 3.59e-01 98.6% 63.3%
None — 0.51 42.0 2.39e-01 95.7% 22.8%
4467359 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.51 36.0 2.76e-01 88.4% 30.6%
4075769 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.51 34.0 3.68e-01 79.7% 89.1%
3775592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 40.0 2.21e-01 95.7% 12.6%
3498280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 43.0 3.58e-01 98.6% 55.4%
3492982 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.50 43.0 3.54e-01 98.6% 53.3%
3707019 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 41.0 2.66e-01 98.6% 77.4%