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KP137440.1__AJA73198.1__3927AP2_42__00042
Bact-VirKP137440.1__AJA73198.1__3927AP2_42__00042
Identity
- Accession:
- KP137440 ↗
- Kingdom:
- phage
Quality
85.4
mean pLDDT
Taxonomy
TaxID: 1572750
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-120
Domain cluster:
rep: OP947159.1__WBC28288.1__DPMD02_24__00025__D7-135
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07157.18 best | DNA_circ_N | 99.2 | 2.10e-28 | 76.1% | 92.0% |
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.77 | 71.0 | 6.52e-01 | 100.0% | 86.1% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.72 | 50.0 | 5.28e-01 | 100.0% | 79.8% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.71 | 64.0 | 5.63e-01 | 100.0% | 75.9% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.70 | 55.0 | 5.63e-01 | 100.0% | 85.7% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.69 | 63.0 | 5.55e-01 | 100.0% | 75.0% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 40.0 | 4.21e-01 | 86.2% | 63.9% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.68 | 61.0 | 5.40e-01 | 100.0% | 76.9% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 37.0 | 4.23e-01 | 93.6% | 73.1% |
| 2bbeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 39.0 | 4.04e-01 | 88.1% | 60.2% |
| 2fb0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 40.0 | 4.24e-01 | 86.2% | 68.1% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 41.0 | 4.19e-01 | 89.0% | 63.2% |
| 3d7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 39.0 | 4.41e-01 | 93.6% | 77.8% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.66 | 61.0 | 5.37e-01 | 100.0% | 82.1% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 38.0 | 4.02e-01 | 85.3% | 64.3% |
| 5fiiB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 36.0 | 4.18e-01 | 83.5% | 76.9% |
| 1zxqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 34.0 | 3.76e-01 | 94.5% | 63.5% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 40.0 | 4.36e-01 | 94.5% | 78.2% |
| 3w7bA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 38.0 | 4.18e-01 | 87.2% | 75.0% |
| 1t0pB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 33.0 | 3.64e-01 | 94.5% | 62.8% |
| 4o38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 42.0 | 4.46e-01 | 95.4% | 79.2% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 37.0 | 3.89e-01 | 85.3% | 65.3% |
| 3gb0A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 41.0 | 4.13e-01 | 89.9% | 69.6% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 36.0 | 3.87e-01 | 100.0% | 71.0% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 35.0 | 3.86e-01 | 89.0% | 71.9% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.58 | 50.0 | 3.52e-01 | 95.4% | 32.6% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.58 | 52.0 | 4.79e-01 | 100.0% | 88.7% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.57 | 52.0 | 4.20e-01 | 100.0% | 75.7% |
| 3dxpA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 35.0 | 3.71e-01 | 95.4% | 68.8% |
| 5suhB01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.57 | 38.0 | 3.97e-01 | 95.4% | 74.7% |
| 3e3pA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 35.0 | 4.01e-01 | 90.8% | 88.5% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.56 | 41.0 | 4.25e-01 | 86.2% | 83.3% |
| 2gysA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.90e-01 | 95.4% | 76.8% |
| 3i1aA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 35.0 | 3.60e-01 | 95.4% | 67.0% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.55 | 48.0 | 4.55e-01 | 100.0% | 86.8% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 33.0 | 3.39e-01 | 85.3% | 62.4% |
| 2xzmJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.55 | 41.0 | 4.18e-01 | 89.0% | 81.9% |
| 1el6A02 | 2.20.20.20 | Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain | 0.52 | 25.0 | 3.27e-01 | 87.2% | 95.7% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.52 | 47.0 | 4.45e-01 | 100.0% | 93.8% |
| 3mb5A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 3.14e-01 | 100.0% | 43.0% |
| 1xauA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 33.0 | 3.45e-01 | 95.4% | 68.3% |
| 2yqzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 37.0 | 3.07e-01 | 90.8% | 42.5% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 3.71e-01 | 90.8% | 75.0% |
| 5ce6A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.51 | 39.0 | 3.02e-01 | 84.4% | 42.0% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.90 | 85.0 | 8.33e-01 | 100.0% | 94.8% |
| 5062396 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.86 | 80.0 | 7.26e-01 | 98.2% | 96.4% |
| 5004559 | 1.1.13.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube | 0.83 | 77.0 | 7.12e-01 | 100.0% | 100.0% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.81 | 76.0 | 6.12e-01 | 100.0% | 79.0% |
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.80 | 74.0 | 6.83e-01 | 100.0% | 87.4% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.79 | 69.0 | 7.09e-01 | 99.1% | 97.1% |
| 4033579 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.77 | 70.0 | 6.74e-01 | 100.0% | 97.6% |
| 1444177 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 71.0 | 6.55e-01 | 100.0% | 86.8% |
| 4034209 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.77 | 70.0 | 6.57e-01 | 100.0% | 97.0% |
| 184986 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.77 | 70.0 | 6.74e-01 | 100.0% | 93.5% |
| 4032562 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.76 | 69.0 | 6.55e-01 | 100.0% | 94.6% |
| 3581358 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.76 | 69.0 | 6.13e-01 | 100.0% | 84.5% |
| 3969448 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 67.0 | 6.80e-01 | 100.0% | 99.0% |
| 4954561 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 68.0 | 6.34e-01 | 100.0% | 93.3% |
| 2101663 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.74 | 67.0 | 5.87e-01 | 100.0% | 84.0% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.74 | 67.0 | 6.36e-01 | 100.0% | 86.9% |
| 4957562 | 1.1.13.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF6046 | 0.73 | 65.0 | 6.54e-01 | 100.0% | 93.6% |
| 4888732 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.73 | 65.0 | 5.81e-01 | 100.0% | 76.3% |
| 2674670 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.72 | 66.0 | 5.63e-01 | 100.0% | 70.3% |
| 4059301 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.72 | 65.0 | 6.50e-01 | 100.0% | 95.5% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.71 | 63.0 | 4.72e-01 | 100.0% | 39.3% |
| 2101633 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.71 | 65.0 | 5.60e-01 | 100.0% | 70.1% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.71 | 65.0 | 5.93e-01 | 100.0% | 82.9% |
| 3976188 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.70 | 63.0 | 5.49e-01 | 100.0% | 72.7% |
| 2832217 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.70 | 62.0 | 5.74e-01 | 100.0% | 86.6% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.69 | 62.0 | 5.59e-01 | 100.0% | 87.6% |
| 5011413 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.69 | 38.0 | 4.17e-01 | 89.9% | 64.4% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 62.0 | 5.99e-01 | 100.0% | 93.5% |
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.68 | 61.0 | 5.58e-01 | 100.0% | 84.1% |
| 3218711 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.68 | 42.0 | 4.30e-01 | 94.5% | 63.8% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 61.0 | 5.80e-01 | 100.0% | 91.5% |
| 3942828 | 1.1.13.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 | 0.67 | 59.0 | 5.46e-01 | 100.0% | 87.6% |
| 3731186 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.66 | 41.0 | 5.04e-01 | 83.5% | 98.6% |
| 3687652 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.65 | 40.0 | 4.87e-01 | 83.5% | 95.7% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.64 | 48.0 | 5.25e-01 | 95.4% | 98.8% |
| 5079195 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.64 | 58.0 | 4.55e-01 | 100.0% | 87.6% |
| 4616814 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.62 | 45.0 | 4.66e-01 | 98.2% | 82.0% |
| 3585212 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.61 | 56.0 | 4.44e-01 | 100.0% | 85.6% |
| 3969813 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.61 | 44.0 | 4.48e-01 | 98.2% | 78.1% |
| 3970985 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.60 | 54.0 | 4.97e-01 | 100.0% | 92.1% |
| 3465961 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.59 | 44.0 | 3.61e-01 | 80.7% | 76.1% |
| 4996950 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.59 | 36.0 | 3.45e-01 | 91.7% | 52.3% |
| 3386803 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.58 | 40.0 | 4.21e-01 | 98.2% | 78.0% |
| 5006527 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 4.29e-01 | 96.3% | 71.7% |
| 3948250 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.58 | 52.0 | 4.68e-01 | 100.0% | 87.1% |
| 4956118 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.58 | 35.0 | 3.93e-01 | 89.0% | 77.6% |
| 140398 | 304.124.1.4 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF4128 | 0.58 | 52.0 | 4.79e-01 | 100.0% | 88.7% |
| 3807657 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.58 | 44.0 | 3.46e-01 | 82.6% | 75.6% |
| 3723425 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 43.0 | 3.15e-01 | 93.6% | 27.1% |
| 3949263 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.54 | 48.0 | 4.94e-01 | 99.1% | 100.0% |
| 4255072 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.54 | 45.0 | 3.75e-01 | 91.7% | 56.4% |
| 4962530 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.53 | 35.0 | 3.61e-01 | 92.7% | 69.5% |
| 3960516 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 43.0 | 3.67e-01 | 90.8% | 58.4% |
| 3678951 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.52 | 43.0 | 3.43e-01 | 91.7% | 55.3% |
| 3668186 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.50 | 35.0 | 2.65e-01 | 96.3% | 28.4% |
| 3279708 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.50 | 36.0 | 3.54e-01 | 89.9% | 69.6% |
D2
high
residues 378-428
Domain cluster:
rep: CAKLQF020000011.1__CAH1085983.1__SAMEA5780031_02231__00031__D106-155
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b8vA02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.78 | 66.0 | 5.91e-01 | 100.0% | 67.1% |
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.76 | 61.0 | 6.28e-01 | 98.0% | 100.0% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.75 | 61.0 | 6.20e-01 | 100.0% | 95.9% |
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.68 | 51.0 | 3.57e-01 | 80.4% | 51.5% |
| 3pfyA02 | 6.10.20.180 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.65 | 48.0 | 4.64e-01 | 78.4% | 91.2% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 49.0 | 4.49e-01 | 92.2% | 93.2% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 4.22e-01 | 92.2% | 81.0% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 45.0 | 4.26e-01 | 92.2% | 93.0% |
| 2zo4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 4.46e-01 | 82.4% | 100.0% |
| 3mczA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 4.10e-01 | 92.2% | 69.5% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 4.37e-01 | 96.1% | 91.0% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 44.0 | 4.26e-01 | 90.2% | 95.2% |
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 4.32e-01 | 92.2% | 95.1% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.91e-01 | 92.2% | 79.1% |
| 1ku9B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.88e-01 | 92.2% | 79.3% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 47.0 | 4.09e-01 | 100.0% | 59.1% |
| 1o3sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 4.06e-01 | 92.2% | 97.1% |
| 1s6lA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 42.0 | 4.21e-01 | 90.2% | 96.2% |
| 2j3lA03 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.54 | 45.0 | 3.36e-01 | 100.0% | 80.3% |
| 3majA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 4.00e-01 | 92.2% | 86.7% |
| 1b9rA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.53 | 41.0 | 3.52e-01 | 98.0% | 85.7% |
| 1hkqA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.25e-01 | 92.2% | 73.6% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.76e-01 | 90.2% | 86.2% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.91e-01 | 96.1% | 71.2% |
| 5zorA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 39.0 | 3.69e-01 | 96.1% | 90.4% |
| 4p9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.84e-01 | 94.1% | 80.6% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3267280 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.86 | 74.0 | 7.46e-01 | 100.0% | 96.0% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.82 | 71.0 | 6.94e-01 | 100.0% | 90.9% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 71.0 | 6.75e-01 | 100.0% | 85.5% |
| 4277578 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 70.0 | 7.07e-01 | 100.0% | 98.0% |
| 3165082 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 66.0 | 6.72e-01 | 100.0% | 94.0% |
| 3898121 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 65.0 | 6.37e-01 | 100.0% | 83.6% |
| 3979943 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.79 | 66.0 | 6.65e-01 | 94.1% | 98.0% |
| 3675929 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 64.0 | 6.33e-01 | 100.0% | 83.6% |
| 3305689 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.79 | 67.0 | 4.87e-01 | 100.0% | 35.0% |
| 2124476 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 66.0 | 4.87e-01 | 100.0% | 36.3% |
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 66.0 | 6.46e-01 | 100.0% | 90.9% |
| 3819870 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.77 | 69.0 | 5.02e-01 | 100.0% | 40.0% |
| 2074716 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 64.0 | 6.42e-01 | 100.0% | 94.1% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.77 | 66.0 | 6.02e-01 | 100.0% | 77.1% |
| 2047861 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 62.0 | 6.02e-01 | 100.0% | 81.0% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 65.0 | 6.42e-01 | 100.0% | 92.7% |
| 3448128 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.76 | 68.0 | 4.94e-01 | 100.0% | 39.3% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 65.0 | 6.35e-01 | 100.0% | 90.9% |
| 4149501 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 63.0 | 6.42e-01 | 100.0% | 96.0% |
| 4492966 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 62.0 | 6.15e-01 | 100.0% | 87.3% |
| 4069716 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.76 | 64.0 | 4.92e-01 | 100.0% | 41.7% |
| 3720958 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 62.0 | 6.25e-01 | 100.0% | 96.0% |
| 3234671 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 61.0 | 6.02e-01 | 100.0% | 85.5% |
| 3337328 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.75 | 65.0 | 4.07e-01 | 100.0% | 18.7% |
| 2042916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 61.0 | 6.02e-01 | 100.0% | 87.0% |
| 3903953 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 59.0 | 6.00e-01 | 100.0% | 90.0% |
| 4022922 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 60.0 | 5.88e-01 | 100.0% | 85.5% |
| 3324708 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 61.0 | 5.82e-01 | 100.0% | 80.0% |
| 3955076 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 58.0 | 6.02e-01 | 90.2% | 100.0% |
| 3417561 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 62.0 | 3.91e-01 | 100.0% | 17.6% |
| 3679146 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 62.0 | 4.69e-01 | 100.0% | 39.2% |
| 3349612 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.73 | 58.0 | 5.85e-01 | 100.0% | 90.0% |
| 3375189 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.73 | 63.0 | 5.73e-01 | 100.0% | 72.9% |
| 3666767 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.73 | 62.0 | 5.02e-01 | 100.0% | 48.6% |
| 4019982 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.73 | 60.0 | 5.76e-01 | 100.0% | 81.7% |
| 1759182 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 59.0 | 5.99e-01 | 100.0% | 94.1% |
| 3656643 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.72 | 62.0 | 4.62e-01 | 100.0% | 38.5% |
| 4128043 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 58.0 | 6.07e-01 | 96.1% | 100.0% |
| 3981327 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 58.0 | 5.73e-01 | 100.0% | 87.0% |
| 4600619 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.72 | 60.0 | 5.68e-01 | 100.0% | 90.8% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.72 | 61.0 | 5.89e-01 | 100.0% | 90.0% |
| 3320955 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.71 | 58.0 | 5.40e-01 | 100.0% | 73.8% |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.70 | 57.0 | 5.19e-01 | 100.0% | 66.2% |
| 2429116 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.68 | 50.0 | 3.54e-01 | 78.4% | 45.5% |
| 3970261 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.68 | 59.0 | 5.86e-01 | 100.0% | 94.4% |
| 4031038 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.65 | 55.0 | 5.28e-01 | 100.0% | 96.7% |
| 3963519 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.65 | 54.0 | 5.14e-01 | 100.0% | 80.0% |
| 4008890 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.64 | 52.0 | 5.18e-01 | 100.0% | 92.7% |
| 5072380 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.64 | 50.0 | 4.30e-01 | 100.0% | 64.0% |
| 4994965 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.63 | 50.0 | 3.39e-01 | 100.0% | 71.8% |
| 3386481 | 3953.1.1.0 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain | 0.61 | 49.0 | 4.12e-01 | 100.0% | 50.0% |
| 3183656 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.60 | 48.0 | 4.60e-01 | 100.0% | 78.5% |
| 3188069 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.60 | 48.0 | 4.59e-01 | 100.0% | 78.5% |
| 4441454 | 102.2.1.1 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › RrnaAD | 0.60 | 47.0 | 4.53e-01 | 98.0% | 98.5% |
| 1606365 | 3953.1.1.0 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain | 0.60 | 48.0 | 4.00e-01 | 100.0% | 47.6% |
| 1512999 | 3953.1.1.0 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain | 0.60 | 47.0 | 4.00e-01 | 100.0% | 49.5% |
| 3164837 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.59 | 48.0 | 4.32e-01 | 100.0% | 63.7% |
| 3283273 | 101.1.2.112 ↗ | alpha arrays › HTH › HTH › winged helix domain › FtsK_gamma | 0.58 | 46.0 | 4.16e-01 | 96.1% | 88.7% |
| 4997938 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 43.0 | 4.29e-01 | 88.2% | 100.0% |
| 5079223 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.58 | 46.0 | 3.52e-01 | 100.0% | 71.7% |
| 4964118 | 101.1.2.934 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N | 0.57 | 44.0 | 3.78e-01 | 96.1% | 60.0% |
| 1649977 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.57 | 47.0 | 4.07e-01 | 100.0% | 57.8% |
| 4946879 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.57 | 45.0 | 3.56e-01 | 100.0% | 75.4% |
| 3606376 | 304.55.2.8 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons | 0.50 | 41.0 | 3.40e-01 | 100.0% | 57.1% |
D3
medium
residues 163-284
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.71 | 50.0 | 5.07e-01 | 71.3% | 100.0% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.68 | 38.0 | 4.12e-01 | 81.1% | 64.7% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.61 | 45.0 | 4.72e-01 | 98.4% | 86.2% |
| 8itfR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 52.0 | 3.97e-01 | 94.3% | 64.6% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.59 | 43.0 | 4.56e-01 | 95.1% | 84.4% |
| 2c0uA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.59 | 53.0 | 4.73e-01 | 97.5% | 85.2% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 32.0 | 3.48e-01 | 95.1% | 62.7% |
| 2oc5A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 51.0 | 4.33e-01 | 100.0% | 89.3% |
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.58 | 38.0 | 3.79e-01 | 99.2% | 62.6% |
| 1h0oA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.58 | 51.0 | 3.96e-01 | 100.0% | 74.0% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.58 | 42.0 | 4.43e-01 | 75.4% | 88.1% |
| 2wbiB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 51.0 | 4.69e-01 | 97.5% | 86.7% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.57 | 41.0 | 4.27e-01 | 99.2% | 79.3% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 51.0 | 4.70e-01 | 100.0% | 93.6% |
| 4bujE03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.56 | 41.0 | 3.39e-01 | 76.2% | 71.7% |
| 5af7B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 50.0 | 4.71e-01 | 97.5% | 91.2% |
| 1siqA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 50.0 | 4.63e-01 | 97.5% | 87.1% |
| 2fbnA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 34.0 | 3.15e-01 | 81.1% | 47.7% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 50.0 | 4.66e-01 | 96.7% | 85.9% |
| 2uxwA01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 49.0 | 4.29e-01 | 97.5% | 73.1% |
| 3ismC01 | 1.25.40.240 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain | 0.55 | 36.0 | 3.35e-01 | 81.1% | 51.3% |
| 2jifA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 49.0 | 4.52e-01 | 96.7% | 87.7% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.55 | 48.0 | 4.74e-01 | 97.5% | 99.2% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 40.0 | 4.05e-01 | 76.2% | 80.0% |
| 1gwiA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.54 | 46.0 | 3.21e-01 | 92.6% | 70.4% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 37.0 | 4.02e-01 | 78.7% | 84.5% |
| 4rfsS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.53 | 40.0 | 3.56e-01 | 81.1% | 61.0% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.52 | 47.0 | 3.91e-01 | 100.0% | 68.7% |
| 2b1eA04 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.52 | 39.0 | 3.87e-01 | 83.6% | 76.4% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 36.0 | 3.99e-01 | 78.7% | 90.8% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 43.0 | 3.89e-01 | 95.9% | 65.1% |
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 37.0 | 3.49e-01 | 93.4% | 59.6% |
| 1ivhA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 44.0 | 4.28e-01 | 96.7% | 90.8% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 39.0 | 3.65e-01 | 82.8% | 64.7% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 36.0 | 3.81e-01 | 98.4% | 84.8% |
| 7smtA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.51 | 36.0 | 3.24e-01 | 73.8% | 90.2% |
| 1w99A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.51 | 46.0 | 4.12e-01 | 100.0% | 78.0% |
| 2c9kA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.51 | 44.0 | 3.58e-01 | 97.5% | 68.6% |
| 3c8eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 36.0 | 3.35e-01 | 82.8% | 57.3% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 40.0 | 3.46e-01 | 83.6% | 84.7% |
| 4wqoD00 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.50 | 44.0 | 4.22e-01 | 97.5% | 89.4% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3872947 | 633.6.1.43 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › PF28139 | 0.67 | 54.0 | 5.13e-01 | 85.2% | 94.5% |
| 5070237 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.65 | 42.0 | 4.85e-01 | 78.7% | 88.9% |
| 5044572 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.62 | 45.0 | 4.81e-01 | 97.5% | 87.6% |
| 3462175 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 42.0 | 4.19e-01 | 72.1% | 66.2% |
| 3487644 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.61 | 48.0 | 3.73e-01 | 82.8% | 46.3% |
| 4014076 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.61 | 55.0 | 5.06e-01 | 100.0% | 93.1% |
| 3616157 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.61 | 41.0 | 4.55e-01 | 78.7% | 87.4% |
| 3621549 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.61 | 42.0 | 3.84e-01 | 70.5% | 59.4% |
| 5018387 | 604.18.1.0 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in regulatory ATPase variant A (RavA) › Triple-helical domain in regulatory ATPase variant A (RavA) | 0.61 | 33.0 | 3.54e-01 | 80.3% | 60.0% |
| 3756348 | 3914.1.1.4 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMC | 0.61 | 55.0 | 3.61e-01 | 100.0% | 55.0% |
| 4980719 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.59 | 45.0 | 3.71e-01 | 82.8% | 51.1% |
| 4996789 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.58 | 46.0 | 3.95e-01 | 100.0% | 52.8% |
| 5076467 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.57 | 52.0 | 4.56e-01 | 99.2% | 78.3% |
| 3342169 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 42.0 | 3.36e-01 | 82.0% | 38.7% |
| 4449608 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.57 | 44.0 | 3.63e-01 | 82.8% | 81.8% |
| 5074225 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.56 | 37.0 | 4.15e-01 | 80.3% | 88.9% |
| 3680328 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.56 | 51.0 | 4.93e-01 | 100.0% | 96.4% |
| 3280145 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.56 | 50.0 | 4.62e-01 | 97.5% | 90.9% |
| 5073428 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.56 | 50.0 | 4.54e-01 | 97.5% | 85.0% |
| 3428358 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.56 | 48.0 | 4.23e-01 | 93.4% | 82.1% |
| 3641299 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.56 | 47.0 | 4.16e-01 | 93.4% | 75.7% |
| 5024439 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.55 | 49.0 | 4.65e-01 | 97.5% | 90.3% |
| 4400920 | 5076.2.1.6 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › Glucan_synthase | 0.55 | 50.0 | 4.11e-01 | 100.0% | 89.5% |
| 3935763 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.55 | 49.0 | 4.03e-01 | 98.4% | 67.6% |
| 3189586 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.55 | 47.0 | 4.29e-01 | 92.6% | 95.0% |
| 3610403 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.54 | 38.0 | 3.55e-01 | 72.1% | 75.3% |
| 4974984 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.54 | 41.0 | 3.47e-01 | 79.5% | 88.3% |
| 3209446 | 632.22.1.131 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › SOG2 | 0.54 | 47.0 | 4.55e-01 | 93.4% | 100.0% |
| 3741090 | 5069.1.1.39 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Glucan_synthase | 0.54 | 49.0 | 3.95e-01 | 100.0% | 94.0% |
| 5010902 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.54 | 48.0 | 4.77e-01 | 99.2% | 98.5% |
| 3927006 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.53 | 35.0 | 4.03e-01 | 78.7% | 91.1% |
| 3786136 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.53 | 35.0 | 3.66e-01 | 78.7% | 72.2% |
| 3347780 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.53 | 45.0 | 3.94e-01 | 94.3% | 86.5% |
| 3715946 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.52 | 41.0 | 4.07e-01 | 82.0% | 91.2% |
| 3523336 | 174.1.1.12 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › BCLP | 0.52 | 46.0 | 4.13e-01 | 97.5% | 81.2% |
| 3733697 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 39.0 | 2.63e-01 | 77.9% | 61.3% |
| 3185438 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.52 | 40.0 | 3.38e-01 | 81.1% | 89.5% |
| 3994225 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.51 | 38.0 | 3.64e-01 | 77.9% | 82.8% |
| 3303028 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.51 | 44.0 | 4.10e-01 | 95.1% | 86.5% |
| 3710393 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.51 | 39.0 | 3.65e-01 | 80.3% | 76.0% |
| 4248539 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.51 | 45.0 | 4.41e-01 | 95.9% | 100.0% |
| 3226815 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.51 | 40.0 | 3.83e-01 | 84.4% | 77.2% |
| 5056276 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.51 | 41.0 | 3.81e-01 | 88.5% | 81.9% |
| 4960871 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.50 | 45.0 | 3.56e-01 | 98.4% | 62.8% |
| 4557092 | 633.23.1.32 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CASP_dom | 0.50 | 42.0 | 3.99e-01 | 91.0% | 94.6% |
D4
medium
residues 285-375
Domain cluster:
representative
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.89 | 60.0 | 6.11e-01 | 72.5% | 70.0% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.87 | 47.0 | 6.19e-01 | 85.7% | 96.1% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.86 | 69.0 | 4.94e-01 | 83.5% | 46.4% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.84 | 64.0 | 4.76e-01 | 80.2% | 37.9% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.84 | 62.0 | 6.74e-01 | 92.3% | 92.2% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.84 | 72.0 | 6.93e-01 | 100.0% | 83.2% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.84 | 76.0 | 5.64e-01 | 98.9% | 41.9% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.84 | 67.0 | 5.57e-01 | 83.5% | 58.5% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.83 | 64.0 | 5.54e-01 | 80.2% | 54.9% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.82 | 62.0 | 6.76e-01 | 98.9% | 97.3% |
| 3l39A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.82 | 75.0 | 5.74e-01 | 100.0% | 45.5% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.82 | 65.0 | 6.63e-01 | 83.5% | 88.5% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.81 | 58.0 | 6.50e-01 | 74.7% | 100.0% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.80 | 62.0 | 6.02e-01 | 81.3% | 74.0% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 71.0 | 7.02e-01 | 96.7% | 91.7% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 62.0 | 6.13e-01 | 81.3% | 94.8% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.80 | 72.0 | 5.53e-01 | 97.8% | 76.4% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.80 | 64.0 | 6.31e-01 | 89.0% | 81.1% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.80 | 58.0 | 6.18e-01 | 78.0% | 88.5% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.79 | 61.0 | 6.27e-01 | 82.4% | 87.1% |
| 4ke2A00 | 6.10.140.1860 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 59.0 | 4.55e-01 | 79.1% | 37.8% |
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 61.0 | 4.58e-01 | 82.4% | 99.1% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 60.0 | 4.93e-01 | 81.3% | 46.0% |
| 3owaB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.78 | 57.0 | 4.74e-01 | 76.9% | 48.4% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.78 | 71.0 | 4.76e-01 | 100.0% | 60.6% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 69.0 | 6.91e-01 | 100.0% | 95.7% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.78 | 64.0 | 5.65e-01 | 87.9% | 65.4% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 58.0 | 6.30e-01 | 80.2% | 97.3% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 59.0 | 6.33e-01 | 80.2% | 100.0% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.78 | 58.0 | 6.28e-01 | 80.2% | 95.9% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 47.0 | 5.68e-01 | 80.2% | 96.6% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.77 | 53.0 | 5.82e-01 | 70.3% | 90.1% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.77 | 57.0 | 4.95e-01 | 79.1% | 51.1% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 57.0 | 6.36e-01 | 87.9% | 100.0% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.76 | 61.0 | 6.17e-01 | 100.0% | 86.8% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.76 | 68.0 | 6.71e-01 | 100.0% | 91.8% |
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 49.0 | 5.63e-01 | 83.5% | 88.2% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.76 | 60.0 | 6.44e-01 | 96.7% | 100.0% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 58.0 | 4.26e-01 | 82.4% | 31.4% |
| 2az0B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.76 | 53.0 | 5.89e-01 | 71.4% | 98.6% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.76 | 59.0 | 5.38e-01 | 98.9% | 62.8% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 67.0 | 5.10e-01 | 95.6% | 100.0% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 67.0 | 5.03e-01 | 100.0% | 46.4% |
| 5j1hA01 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 66.0 | 5.28e-01 | 100.0% | 50.0% |
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.74 | 56.0 | 4.30e-01 | 81.3% | 35.7% |
| 2xsbA02 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.73 | 61.0 | 5.15e-01 | 98.9% | 55.0% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 66.0 | 5.84e-01 | 100.0% | 75.4% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.73 | 51.0 | 4.75e-01 | 97.8% | 57.9% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.73 | 64.0 | 6.03e-01 | 96.7% | 83.6% |
| 1ni3A03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.72 | 50.0 | 5.07e-01 | 75.8% | 71.4% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.72 | 56.0 | 5.75e-01 | 83.5% | 89.5% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 64.0 | 5.40e-01 | 100.0% | 85.5% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.71 | 64.0 | 5.49e-01 | 100.0% | 71.7% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.71 | 56.0 | 5.51e-01 | 84.6% | 80.8% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.69 | 57.0 | 5.11e-01 | 87.9% | 67.7% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.69 | 52.0 | 4.64e-01 | 92.3% | 55.6% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 46.0 | 4.68e-01 | 70.3% | 69.2% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.69 | 51.0 | 4.68e-01 | 78.0% | 61.9% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 47.0 | 5.29e-01 | 72.5% | 100.0% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.68 | 48.0 | 4.34e-01 | 96.7% | 53.2% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.68 | 52.0 | 3.74e-01 | 81.3% | 35.5% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.68 | 60.0 | 5.36e-01 | 97.8% | 75.6% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 51.0 | 5.52e-01 | 83.5% | 100.0% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 58.0 | 5.41e-01 | 100.0% | 87.5% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.66 | 53.0 | 5.43e-01 | 100.0% | 92.0% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 50.0 | 5.19e-01 | 81.3% | 95.3% |
| 3zdqA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.64 | 57.0 | 3.90e-01 | 100.0% | 86.2% |
| 6hwjA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.61 | 53.0 | 3.88e-01 | 95.6% | 73.3% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 35.0 | 4.00e-01 | 100.0% | 86.8% |
| 4ocqA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.54 | 46.0 | 3.56e-01 | 100.0% | 62.1% |
| 1x3kA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 46.0 | 3.91e-01 | 100.0% | 87.1% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5007978 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.86 | 68.0 | 5.80e-01 | 81.3% | 54.8% |
| 4017285 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 66.0 | 5.06e-01 | 81.3% | 42.6% |
| 3745112 | 3755.3.1.298 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › ING | 0.85 | 66.0 | 5.93e-01 | 81.3% | 70.0% |
| 3704699 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.85 | 72.0 | 7.10e-01 | 97.8% | 86.3% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.85 | 61.0 | 4.86e-01 | 79.1% | 40.0% |
| 3283457 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.84 | 66.0 | 6.40e-01 | 82.4% | 76.0% |
| 3409567 | 3755.3.1.324 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 | 0.84 | 60.0 | 4.86e-01 | 78.0% | 41.2% |
| 3564399 | 3755.3.1.282 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Tmemb_cc2 | 0.83 | 67.0 | 6.09e-01 | 83.5% | 76.5% |
| 3973453 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.83 | 61.0 | 6.52e-01 | 76.9% | 87.5% |
| 3387239 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.83 | 63.0 | 5.70e-01 | 81.3% | 60.0% |
| 3164951 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.83 | 64.0 | 5.13e-01 | 81.3% | 44.1% |
| 3285270 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.83 | 64.0 | 6.64e-01 | 83.5% | 87.1% |
| 3864210 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.83 | 64.0 | 3.85e-01 | 81.3% | 13.8% |
| 3963355 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.83 | 64.0 | 7.01e-01 | 82.4% | 98.7% |
| 3894567 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.82 | 64.0 | 4.92e-01 | 81.3% | 40.5% |
| 3239667 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.82 | 64.0 | 3.70e-01 | 81.3% | 11.9% |
| 3598120 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.82 | 65.0 | 5.82e-01 | 82.4% | 68.3% |
| 3767783 | 192.2.1.19 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › FAM186A-B_C | 0.82 | 64.0 | 5.35e-01 | 82.4% | 66.0% |
| 3804937 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.82 | 64.0 | 5.24e-01 | 82.4% | 46.9% |
| 4038742 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.82 | 63.0 | 6.29e-01 | 81.3% | 77.9% |
| 3788782 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.82 | 59.0 | 3.58e-01 | 82.4% | 13.2% |
| 3490044 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.82 | 75.0 | 6.62e-01 | 100.0% | 70.8% |
| 3852832 | 3922.1.1.72 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › FAM186A-B_C | 0.82 | 64.0 | 5.32e-01 | 82.4% | 66.0% |
| 3619435 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.82 | 61.0 | 6.02e-01 | 78.0% | 74.7% |
| 5040665 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.81 | 64.0 | 3.82e-01 | 82.4% | 28.9% |
| 5020818 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.81 | 64.0 | 3.91e-01 | 82.4% | 23.1% |
| 3416168 | 4177.1.1.4 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › IMD | 0.81 | 63.0 | 4.64e-01 | 81.3% | 35.9% |
| 5033256 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.81 | 64.0 | 5.15e-01 | 82.4% | 49.1% |
| 5080472 | 3834.1.1.0 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain | 0.81 | 76.0 | 4.64e-01 | 100.0% | 84.9% |
| 4936791 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.81 | 63.0 | 3.94e-01 | 82.4% | 18.1% |
| 3598261 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.81 | 73.0 | 6.09e-01 | 100.0% | 84.5% |
| 3205696 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.80 | 74.0 | 6.43e-01 | 100.0% | 74.8% |
| 1495253 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.80 | 62.0 | 6.02e-01 | 81.3% | 74.0% |
| 3679787 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.80 | 63.0 | 4.39e-01 | 82.4% | 27.8% |
| 3952510 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.80 | 60.0 | 6.56e-01 | 80.2% | 96.0% |
| 4484997 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.80 | 61.0 | 5.31e-01 | 82.4% | 54.1% |
| 3573559 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.80 | 72.0 | 6.58e-01 | 98.9% | 76.7% |
| 3252760 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.80 | 73.0 | 6.74e-01 | 100.0% | 79.8% |
| 3347027 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.80 | 73.0 | 5.46e-01 | 100.0% | 50.7% |
| 4993050 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.80 | 62.0 | 4.67e-01 | 82.4% | 91.4% |
| 3514842 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.80 | 69.0 | 6.54e-01 | 100.0% | 81.0% |
| 143217 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.79 | 64.0 | 6.31e-01 | 98.9% | 80.6% |
| 4062183 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.79 | 59.0 | 6.48e-01 | 79.1% | 100.0% |
| 3335074 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.78 | 73.0 | 6.37e-01 | 100.0% | 72.3% |
| 3249439 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.78 | 70.0 | 5.84e-01 | 100.0% | 61.3% |
| 1171038 | 3755.3.1.148 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CT398_CC | 0.78 | 60.0 | 4.67e-01 | 82.4% | 38.7% |
| 3396684 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.78 | 72.0 | 5.70e-01 | 100.0% | 85.1% |
| 3841645 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.78 | 65.0 | 6.38e-01 | 100.0% | 84.0% |
| 3402026 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.77 | 61.0 | 3.71e-01 | 82.4% | 15.7% |
| 4024277 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.77 | 61.0 | 6.61e-01 | 87.9% | 100.0% |
| 3897805 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.77 | 59.0 | 4.78e-01 | 81.3% | 43.5% |
| 4549397 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.77 | 69.0 | 5.78e-01 | 98.9% | 60.6% |
| 3962893 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.77 | 58.0 | 5.74e-01 | 81.3% | 75.8% |
| 5044416 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.77 | 66.0 | 5.13e-01 | 94.5% | 44.2% |
| 4883406 | 622.4.1.1 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5 | 0.77 | 68.0 | 6.27e-01 | 100.0% | 76.7% |
| 3257188 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.77 | 63.0 | 5.58e-01 | 92.3% | 62.3% |
| 3222544 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.77 | 66.0 | 5.88e-01 | 94.5% | 66.9% |
| 4028619 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.76 | 68.0 | 6.73e-01 | 96.7% | 95.8% |
| 3999773 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.76 | 68.0 | 5.93e-01 | 100.0% | 69.3% |
| 3628093 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.76 | 66.0 | 6.23e-01 | 98.9% | 79.0% |
| 4214119 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.76 | 59.0 | 4.13e-01 | 82.4% | 28.4% |
| 3739286 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.76 | 59.0 | 4.34e-01 | 82.4% | 33.5% |
| 5064072 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.76 | 52.0 | 5.31e-01 | 71.4% | 72.2% |
| 3178346 | 109.4.1.25 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DIL | 0.75 | 69.0 | 4.26e-01 | 100.0% | 27.4% |
| 3414844 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.75 | 67.0 | 5.75e-01 | 98.9% | 89.0% |
| 3523903 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.75 | 54.0 | 5.66e-01 | 91.2% | 85.0% |
| 3901145 | 109.4.1.1350 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA, PF31007 | 0.75 | 67.0 | 3.78e-01 | 98.9% | 10.6% |
| 4155676 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.75 | 66.0 | 4.70e-01 | 100.0% | 44.6% |
| 3444721 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.75 | 67.0 | 5.23e-01 | 100.0% | 74.9% |
| 3743077 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.74 | 64.0 | 5.70e-01 | 100.0% | 67.2% |
| 3583684 | 148.1.3.11 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MT | 0.74 | 58.0 | 4.05e-01 | 81.3% | 27.4% |
| 3281879 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.74 | 60.0 | 4.83e-01 | 97.8% | 45.0% |
| 3246381 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.74 | 57.0 | 4.92e-01 | 82.4% | 55.0% |
| 3740232 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.73 | 61.0 | 5.30e-01 | 100.0% | 59.3% |
| 4219218 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 56.0 | 5.31e-01 | 82.4% | 73.6% |
| 4247116 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 55.0 | 5.24e-01 | 82.4% | 67.3% |
| 3254975 | 603.2.1.2 ↗ | alpha bundles › STAT-like › STAT › STAT › Dict-STAT-coil | 0.73 | 64.0 | 5.94e-01 | 98.9% | 79.1% |
| 3229095 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.72 | 56.0 | 5.50e-01 | 83.5% | 96.0% |
| 4862444 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.72 | 64.0 | 5.58e-01 | 98.9% | 90.6% |
| 3741745 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.72 | 54.0 | 4.79e-01 | 81.3% | 55.4% |
| 3453933 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.72 | 54.0 | 5.11e-01 | 81.3% | 66.4% |
| 3880244 | 603.2.1.24 ↗ | alpha bundles › STAT-like › STAT › STAT › TBCA_PH | 0.71 | 63.0 | 5.33e-01 | 100.0% | 91.0% |
| 4963973 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.71 | 54.0 | 4.40e-01 | 82.4% | 43.5% |
| 3714315 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.71 | 56.0 | 5.34e-01 | 96.7% | 74.3% |
| 3504474 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.71 | 61.0 | 5.99e-01 | 95.6% | 92.0% |
| 3224 | 515.1.1.1 ↗ | alpha arrays › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › STAT_int | 0.68 | 48.0 | 4.34e-01 | 96.7% | 53.2% |