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KP273225.1__AJD82494.1__SHEEN_76__00074
Bact-VirKP273225.1__AJD82494.1__SHEEN_76__00074
Identity
- Accession:
- KP273225 ↗
- Kingdom:
- phage
Quality
95.1
mean pLDDT
Taxonomy
TaxID: 1589274
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-55
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.68 | 58.0 | 5.70e-01 | 100.0% | 98.3% |
| 4cc9B00 | 1.20.5.4730 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 51.0 | 4.17e-01 | 83.0% | 55.1% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 48.0 | 4.69e-01 | 83.0% | 84.5% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 48.0 | 4.76e-01 | 83.0% | 83.6% |
| 2cq8A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.60 | 42.0 | 3.77e-01 | 75.5% | 97.5% |
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 44.0 | 4.18e-01 | 92.5% | 65.6% |
| 6p10B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 49.0 | 4.25e-01 | 100.0% | 81.3% |
| 4uavA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 46.0 | 4.06e-01 | 98.1% | 57.6% |
| 2liuA01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.58 | 43.0 | 3.78e-01 | 83.0% | 91.8% |
| 1af7A01 | 1.10.155.10 | Mainly Alpha › Orthogonal Bundle › Chemotaxis Receptor Methyltransferase Cher; domain 1 › Chemotaxis receptor methyltransferase CheR, N-terminal domain | 0.58 | 48.0 | 4.27e-01 | 96.2% | 82.5% |
| 1wixA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.57 | 47.0 | 3.54e-01 | 100.0% | 84.3% |
| 1di1A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.56 | 45.0 | 2.87e-01 | 90.6% | 38.3% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 39.0 | 3.50e-01 | 75.5% | 51.9% |
| 6g94A00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.51 | 36.0 | 2.69e-01 | 79.2% | 77.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3254545 | 103.11.1.0 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related | 0.68 | 56.0 | 5.64e-01 | 100.0% | 94.5% |
| 4119015 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 58.0 | 5.60e-01 | 100.0% | 90.0% |
| 5047035 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.63 | 51.0 | 4.98e-01 | 96.2% | 96.7% |
| 4961037 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.62 | 53.0 | 5.32e-01 | 98.1% | 100.0% |
| 4228716 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 48.0 | 3.63e-01 | 90.6% | 59.3% |
| 3738331 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.60 | 47.0 | 4.71e-01 | 90.6% | 90.9% |
| 5080578 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.59 | 47.0 | 4.67e-01 | 90.6% | 87.3% |
| 3308724 | 3721.1.1.2 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › MAP65_ASE1 | 0.56 | 45.0 | 3.79e-01 | 88.7% | 62.2% |
| 3995291 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.55 | 44.0 | 4.26e-01 | 98.1% | 87.7% |
| 5072463 | 622.1.1.36 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › DUF5788 | 0.54 | 38.0 | 3.15e-01 | 73.6% | 56.7% |
| 3592748 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.53 | 39.0 | 3.79e-01 | 79.2% | 76.7% |
| 3600094 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.52 | 40.0 | 3.23e-01 | 90.6% | 44.2% |