←Back to structures
KP280062.1__AJF40768.1__SBVP1_0110__00110
Bact-VirKP280062.1__AJF40768.1__SBVP1_0110__00110
Identity
- Accession:
- KP280062 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Taxonomy
TaxID: 1589297
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-89
Domain cluster:
representative
CATH (88)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 63.0 | 6.41e-01 | 83.9% | 77.0% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 67.0 | 5.70e-01 | 80.6% | 63.8% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 67.0 | 6.12e-01 | 80.6% | 67.9% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 62.0 | 6.18e-01 | 83.9% | 73.0% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 63.0 | 6.24e-01 | 88.7% | 73.4% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 68.0 | 5.24e-01 | 95.2% | 40.0% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 62.0 | 6.10e-01 | 83.9% | 70.1% |
| 1o3sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 66.0 | 6.33e-01 | 80.6% | 85.5% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 63.0 | 6.34e-01 | 87.1% | 76.2% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 66.0 | 5.84e-01 | 80.6% | 60.7% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 67.0 | 5.88e-01 | 82.3% | 72.1% |
| 5zr6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 63.0 | 6.43e-01 | 77.4% | 81.4% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 69.0 | 5.31e-01 | 95.2% | 41.9% |
| 2vxzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 60.0 | 5.90e-01 | 83.9% | 69.7% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 62.0 | 6.22e-01 | 82.3% | 76.2% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 69.0 | 5.21e-01 | 100.0% | 39.0% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 64.0 | 6.71e-01 | 96.8% | 90.9% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 67.0 | 5.10e-01 | 93.5% | 39.8% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 62.0 | 6.78e-01 | 87.1% | 98.0% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 58.0 | 5.97e-01 | 80.6% | 77.6% |
| 2hr3D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 62.0 | 6.24e-01 | 88.7% | 79.0% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 66.0 | 4.87e-01 | 98.4% | 35.1% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 62.0 | 5.70e-01 | 80.6% | 70.0% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 65.0 | 4.91e-01 | 95.2% | 37.3% |
| 4u7bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 51.0 | 5.99e-01 | 71.0% | 100.0% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 63.0 | 5.71e-01 | 82.3% | 74.4% |
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 61.0 | 6.10e-01 | 88.7% | 77.8% |
| 1biaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 60.0 | 5.94e-01 | 87.1% | 75.0% |
| 2ia2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 60.0 | 5.80e-01 | 83.9% | 70.6% |
| 6j0eB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 67.0 | 5.35e-01 | 91.9% | 47.0% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 56.0 | 6.09e-01 | 79.0% | 88.0% |
| 3broD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 66.0 | 5.09e-01 | 98.4% | 41.0% |
| 4ev0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 62.0 | 5.72e-01 | 82.3% | 70.1% |
| 2d1hB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 72.0 | 6.11e-01 | 100.0% | 62.2% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 65.0 | 5.59e-01 | 96.8% | 58.1% |
| 3fm5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 63.0 | 4.90e-01 | 95.2% | 41.5% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 63.0 | 6.03e-01 | 88.7% | 76.1% |
| 2v9vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 55.0 | 5.63e-01 | 82.3% | 76.7% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 61.0 | 5.41e-01 | 83.9% | 63.2% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 70.0 | 5.60e-01 | 100.0% | 58.3% |
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 65.0 | 5.74e-01 | 98.4% | 64.0% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 5.73e-01 | 96.8% | 65.2% |
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 61.0 | 5.87e-01 | 88.7% | 76.1% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 59.0 | 5.35e-01 | 88.7% | 63.0% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 65.0 | 5.83e-01 | 95.2% | 68.2% |
| 3c57B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 51.0 | 5.63e-01 | 93.5% | 87.8% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 59.0 | 4.71e-01 | 88.7% | 42.4% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 54.0 | 5.77e-01 | 80.6% | 87.0% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 64.0 | 5.42e-01 | 100.0% | 58.0% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 61.0 | 4.80e-01 | 93.5% | 43.3% |
| 7cluA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 57.0 | 5.05e-01 | 88.7% | 57.3% |
| 1z6tA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 61.0 | 5.48e-01 | 98.4% | 65.9% |
| 2ip2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 59.0 | 5.35e-01 | 88.7% | 64.3% |
| 1j5yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 56.0 | 5.60e-01 | 88.7% | 79.7% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 58.0 | 5.89e-01 | 96.8% | 90.0% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 59.0 | 5.78e-01 | 96.8% | 81.8% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 56.0 | 5.33e-01 | 83.9% | 89.0% |
| 3mczA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 4.97e-01 | 88.7% | 61.0% |
| 3lstA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 4.96e-01 | 88.7% | 59.3% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 49.0 | 5.46e-01 | 83.9% | 91.7% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 52.0 | 4.94e-01 | 82.3% | 64.5% |
| 6az1a00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 50.0 | 4.80e-01 | 80.6% | 63.9% |
| 3lmmC04 | 1.10.10.2340 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.71 | 64.0 | 5.72e-01 | 100.0% | 74.7% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 54.0 | 5.38e-01 | 82.3% | 76.9% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.71 | 55.0 | 4.33e-01 | 98.4% | 38.3% |
| 3lmmB05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 50.0 | 5.09e-01 | 79.0% | 77.0% |
| 3keoA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 56.0 | 5.35e-01 | 87.1% | 93.1% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 55.0 | 5.55e-01 | 96.8% | 85.7% |
| 1u2wD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 57.0 | 4.95e-01 | 96.8% | 58.5% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 56.0 | 5.69e-01 | 95.2% | 91.8% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 53.0 | 4.96e-01 | 83.9% | 67.1% |
| 1o57A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 52.0 | 5.02e-01 | 82.3% | 75.0% |
| 3k69A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 3.89e-01 | 82.3% | 33.3% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.68 | 62.0 | 4.22e-01 | 100.0% | 54.9% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 5.23e-01 | 82.3% | 87.7% |
| 4p9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 5.14e-01 | 83.9% | 77.6% |
| 1lvaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 51.0 | 5.18e-01 | 88.7% | 83.9% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 47.0 | 4.69e-01 | 80.6% | 77.3% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.64 | 56.0 | 4.71e-01 | 100.0% | 65.5% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 56.0 | 3.97e-01 | 100.0% | 73.7% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 46.0 | 4.43e-01 | 79.0% | 67.6% |
| 1uhsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 47.0 | 5.03e-01 | 80.6% | 96.3% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 53.0 | 4.46e-01 | 98.4% | 91.5% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 48.0 | 4.26e-01 | 100.0% | 90.2% |
| 3crjC00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 44.0 | 3.29e-01 | 88.7% | 40.2% |
| 6bs3B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 44.0 | 2.87e-01 | 100.0% | 35.4% |
| 3mc1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 42.0 | 4.14e-01 | 96.8% | 86.6% |
| 5i1uA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 43.0 | 2.84e-01 | 98.4% | 91.3% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030237 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.91 | 64.0 | 5.85e-01 | 79.0% | 57.5% |
| 1678738 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.90 | 67.0 | 6.84e-01 | 80.6% | 80.3% |
| 3389326 | 101.1.2.383 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_69 | 0.89 | 63.0 | 6.69e-01 | 79.0% | 83.6% |
| 5058767 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.88 | 64.0 | 6.54e-01 | 88.7% | 78.3% |
| 5072472 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 63.0 | 6.26e-01 | 91.9% | 72.3% |
| 3754779 | 101.1.2.36 ↗ | alpha arrays › HTH › HTH › winged helix domain › z-alpha | 0.87 | 65.0 | 5.55e-01 | 82.3% | 51.6% |
| 5046275 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 64.0 | 6.75e-01 | 83.9% | 87.3% |
| 4948128 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 68.0 | 6.68e-01 | 88.7% | 78.5% |
| 4443954 | 101.1.2.27 ↗ | alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind | 0.86 | 72.0 | 6.51e-01 | 95.2% | 68.8% |
| 5031872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 63.0 | 6.43e-01 | 83.9% | 80.0% |
| 4939604 | 101.1.2.465 ↗ | alpha arrays › HTH › HTH › winged helix domain › CdvB_HTH | 0.86 | 61.0 | 6.75e-01 | 80.6% | 93.9% |
| 5046904 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 67.0 | 5.45e-01 | 83.9% | 47.3% |
| 3714984 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 53.0 | 6.15e-01 | 71.0% | 88.9% |
| 3989015 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 74.0 | 6.12e-01 | 100.0% | 56.2% |
| 4940742 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.85 | 62.0 | 5.54e-01 | 82.3% | 56.5% |
| 5010146 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.84 | 66.0 | 5.45e-01 | 91.9% | 49.5% |
| 4952680 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 69.0 | 6.47e-01 | 91.9% | 73.3% |
| 5047806 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.83 | 68.0 | 6.02e-01 | 87.1% | 63.5% |
| 5010738 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.82 | 72.0 | 5.73e-01 | 100.0% | 50.0% |
| 2599 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.82 | 66.0 | 5.07e-01 | 95.2% | 40.0% |
| 4955409 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.82 | 75.0 | 5.03e-01 | 100.0% | 29.5% |
| 4991142 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.82 | 64.0 | 5.86e-01 | 83.9% | 65.0% |
| 3483048 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.82 | 60.0 | 5.61e-01 | 83.9% | 64.0% |
| 5060488 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.81 | 65.0 | 5.56e-01 | 91.9% | 55.8% |
| 5032049 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 59.0 | 6.04e-01 | 83.9% | 80.0% |
| 4926894 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.80 | 63.0 | 6.38e-01 | 91.9% | 86.7% |
| 5046294 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.80 | 60.0 | 6.31e-01 | 85.5% | 89.1% |
| 3604402 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.80 | 63.0 | 5.44e-01 | 85.5% | 63.2% |
| 4984599 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.79 | 65.0 | 5.62e-01 | 91.9% | 57.9% |
| 4895784 | 101.1.2.623 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25983 | 0.79 | 57.0 | 5.57e-01 | 83.9% | 70.1% |
| 5011414 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.79 | 62.0 | 6.33e-01 | 88.7% | 86.7% |
| 4983906 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.79 | 67.0 | 5.74e-01 | 91.9% | 62.1% |
| 5011653 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.79 | 71.0 | 5.84e-01 | 100.0% | 56.4% |
| 5053135 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 64.0 | 6.50e-01 | 100.0% | 91.7% |
| 2511579 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.78 | 67.0 | 5.83e-01 | 96.8% | 63.3% |
| 4984317 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.78 | 57.0 | 5.97e-01 | 83.9% | 87.3% |
| 5048466 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 70.0 | 5.33e-01 | 100.0% | 44.3% |
| 4966784 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 56.0 | 5.71e-01 | 83.9% | 78.3% |
| 4928805 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.78 | 64.0 | 5.97e-01 | 91.9% | 73.3% |
| 5083248 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.78 | 55.0 | 5.65e-01 | 83.9% | 78.3% |
| 4992785 | 101.1.2.222 ↗ | alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N | 0.78 | 70.0 | 5.81e-01 | 100.0% | 68.6% |
| 3279153 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.78 | 62.0 | 6.10e-01 | 100.0% | 81.5% |
| 3611703 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.78 | 57.0 | 5.61e-01 | 83.9% | 73.8% |
| 4973395 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.77 | 60.0 | 6.16e-01 | 91.9% | 86.7% |
| 5046351 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.77 | 58.0 | 5.33e-01 | 91.9% | 62.5% |
| 3511100 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.76 | 54.0 | 5.73e-01 | 83.9% | 85.5% |
| 3278288 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.76 | 58.0 | 5.17e-01 | 88.7% | 57.8% |
| 5039985 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 65.0 | 6.47e-01 | 96.8% | 90.8% |
| 2572 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.75 | 55.0 | 5.51e-01 | 85.5% | 77.8% |
| 4060124 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.74 | 57.0 | 4.26e-01 | 85.5% | 33.5% |
| 3980036 | 101.1.2.372 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_64 | 0.74 | 59.0 | 5.57e-01 | 87.1% | 73.3% |
| 5035687 | 101.1.2.948 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27297 | 0.73 | 64.0 | 5.43e-01 | 100.0% | 64.8% |
| 4165105 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.73 | 56.0 | 5.09e-01 | 87.1% | 61.2% |
| 3587510 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.73 | 64.0 | 4.78e-01 | 96.8% | 82.0% |
| 4310740 | 101.1.2.81 ↗ | alpha arrays › HTH › HTH › winged helix domain › Put_DNA-bind_N | 0.73 | 58.0 | 5.36e-01 | 87.1% | 83.7% |
| 4983993 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.73 | 61.0 | 6.25e-01 | 96.8% | 96.7% |
| 3424337 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.72 | 64.0 | 5.91e-01 | 100.0% | 87.5% |
| 4976486 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 52.0 | 5.34e-01 | 79.0% | 80.0% |
| 4197192 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.72 | 54.0 | 4.99e-01 | 80.6% | 70.0% |
| 4974062 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.72 | 56.0 | 5.91e-01 | 87.1% | 96.4% |
| None | — | 0.72 | 62.0 | 3.83e-01 | 96.8% | 32.0% | |
| 3283702 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.71 | 57.0 | 5.26e-01 | 88.7% | 67.5% |
| 3280481 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.71 | 54.0 | 5.07e-01 | 82.3% | 68.0% |
| 5026928 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 51.0 | 4.75e-01 | 91.9% | 62.5% |
| 4945097 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 54.0 | 5.51e-01 | 91.9% | 88.3% |
| None | — | 0.69 | 59.0 | 5.18e-01 | 98.4% | 65.3% | |
| None | — | 0.69 | 58.0 | 5.23e-01 | 98.4% | 68.9% | |
| None | — | 0.69 | 49.0 | 2.92e-01 | 80.6% | 9.8% | |
| 4979745 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 59.0 | 5.81e-01 | 98.4% | 90.8% |
| 3971213 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.68 | 52.0 | 4.88e-01 | 82.3% | 68.0% |
| 3708827 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 60.0 | 4.38e-01 | 100.0% | 74.7% |
| None | — | 0.68 | 58.0 | 5.19e-01 | 98.4% | 68.9% | |
| 3716640 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.68 | 61.0 | 4.28e-01 | 100.0% | 91.6% |
| 3600385 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 60.0 | 4.11e-01 | 100.0% | 89.5% |
| 3328518 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.67 | 60.0 | 4.29e-01 | 100.0% | 66.5% |
| 3718570 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.67 | 60.0 | 4.78e-01 | 100.0% | 79.2% |
| 3593798 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 60.0 | 4.41e-01 | 100.0% | 70.9% |
| 3299379 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.67 | 55.0 | 4.15e-01 | 91.9% | 37.3% |
| 3597468 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 59.0 | 4.32e-01 | 100.0% | 71.2% |
| 3254469 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.66 | 58.0 | 4.22e-01 | 100.0% | 40.6% |
| 3701878 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.66 | 58.0 | 4.24e-01 | 100.0% | 70.3% |
| 3249600 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 57.0 | 4.26e-01 | 100.0% | 71.5% |
| 4097443 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.63 | 49.0 | 3.64e-01 | 96.8% | 31.8% |
| 3189639 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.60 | 46.0 | 4.59e-01 | 93.5% | 78.5% |
| 4614519 | 5067.1.1.12 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › UPF0014 | 0.51 | 43.0 | 3.07e-01 | 100.0% | 79.9% |
D2
medium
residues 90-165
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ktaA01 | 6.10.140.530 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 32.0 | 3.67e-01 | 82.9% | 68.4% |
| 1vwxr00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.57 | 35.0 | 3.01e-01 | 88.2% | 37.6% |
| 1neiA00 | 3.30.160.220 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG | 0.56 | 31.0 | 3.41e-01 | 100.0% | 66.7% |
| 1n1bB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.54 | 41.0 | 2.83e-01 | 85.5% | 34.2% |
| 4xchA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.53 | 44.0 | 3.54e-01 | 90.8% | 81.9% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.52 | 38.0 | 2.37e-01 | 80.3% | 85.3% |
| 2j6lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 35.0 | 2.36e-01 | 71.1% | 64.7% |
| 2nscA01 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.51 | 37.0 | 3.72e-01 | 77.6% | 91.0% |
| 8b4hA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 42.0 | 3.34e-01 | 92.1% | 56.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4317544 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.67 | 35.0 | 3.18e-01 | 77.6% | 38.0% |
| 4296683 | 604.3.1.2 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › ABA4-like | 0.56 | 39.0 | 3.21e-01 | 73.7% | 84.1% |
| 3918540 | 386.1.1.281 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF27082 | 0.56 | 26.0 | 3.28e-01 | 100.0% | 75.0% |
| 3492270 | 11.16.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal domain in A1 cistron-splicing factor AAR2 › N-terminal domain in A1 cistron-splicing factor AAR2 › AAR2_1st | 0.54 | 30.0 | 2.35e-01 | 86.8% | 21.7% |
| 3627409 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.52 | 37.0 | 2.69e-01 | 75.0% | 29.0% |
| 4153200 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.52 | 39.0 | 3.22e-01 | 84.2% | 65.3% |
| 3196986 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.51 | 37.0 | 3.68e-01 | 80.3% | 83.5% |
| 5084047 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.51 | 43.0 | 3.11e-01 | 98.7% | 87.8% |