Back to structures

KP399677.1__AJE28042.1__SE24_037__00037

Bact-Vir

KP399677.1__AJE28042.1__SE24_037__00037

Identity

Accession:
KP399677 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-91
PDB
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6hn7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 72.0 6.33e-01 100.0% 72.2%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.20e-01 98.0% 63.9%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.71 61.0 5.30e-01 100.0% 73.4%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.71 62.0 4.76e-01 100.0% 44.2%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 5.06e-01 92.0% 70.0%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 58.0 5.34e-01 100.0% 97.0%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 4.34e-01 86.0% 55.3%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.66 55.0 5.00e-01 100.0% 94.4%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 4.49e-01 84.0% 70.8%
3lmmC04 1.10.10.2340 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 50.0 4.22e-01 84.0% 56.3%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 4.32e-01 72.0% 62.1%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 4.58e-01 84.0% 65.1%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 4.72e-01 86.0% 71.0%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.64e-01 86.0% 75.0%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 4.70e-01 100.0% 56.7%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 4.41e-01 96.0% 55.6%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 4.50e-01 92.0% 59.2%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.20e-01 84.0% 53.9%
7u37A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.33e-01 78.0% 79.4%
1y6uA01 3.90.105.50 Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › 0.64 51.0 5.20e-01 100.0% 98.0%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 4.70e-01 90.0% 71.9%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 3.93e-01 100.0% 39.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 4.63e-01 96.0% 72.2%
3pfiA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.78e-01 100.0% 71.2%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 45.0 4.41e-01 78.0% 74.5%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 4.48e-01 92.0% 63.0%
1in4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.68e-01 98.0% 67.1%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 4.41e-01 96.0% 61.0%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 4.55e-01 96.0% 69.9%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 3.85e-01 98.0% 44.7%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 50.0 4.46e-01 100.0% 62.8%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 52.0 4.58e-01 100.0% 64.6%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 3.83e-01 100.0% 60.1%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.61 51.0 3.46e-01 100.0% 80.5%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 51.0 3.88e-01 100.0% 39.5%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 3.82e-01 100.0% 37.3%
3oouA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 42.0 4.16e-01 78.0% 69.1%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 3.74e-01 84.0% 49.4%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 3.53e-01 100.0% 33.8%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 3.55e-01 100.0% 35.3%
2xi8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 45.0 4.11e-01 100.0% 66.7%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 45.0 4.06e-01 100.0% 66.7%
3umoA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.55 47.0 2.88e-01 98.0% 84.8%
2mc3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.57e-01 100.0% 58.3%
3ie7A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 40.0 2.63e-01 94.0% 73.1%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 44.0 3.55e-01 100.0% 52.3%
3emuA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 35.0 2.57e-01 72.0% 59.7%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 43.0 3.86e-01 98.0% 68.6%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3164271 101.1.9.136 alpha arrays › HTH › HTH › Putative DNA-binding domain › PF29765 0.90 83.0 7.52e-01 100.0% 89.2%
3965196 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.89 82.0 7.70e-01 100.0% 88.3%
3954861 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.83 74.0 7.18e-01 100.0% 94.5%
2519512 101.1.9.11 alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_Nu1 0.81 72.0 6.33e-01 100.0% 72.2%
4950846 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.81 72.0 7.24e-01 100.0% 100.0%
3589130 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.79 71.0 6.88e-01 100.0% 92.7%
3589467 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 67.0 5.67e-01 100.0% 58.8%
3281256 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 67.0 5.80e-01 100.0% 62.5%
2967124 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 68.0 6.13e-01 100.0% 73.9%
3980161 101.1.9.45 alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA 0.76 64.0 6.27e-01 96.0% 90.9%
3278372 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.76 65.0 6.00e-01 98.0% 75.4%
3589675 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.76 63.0 6.37e-01 98.0% 98.0%
4974775 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.75 66.0 6.24e-01 100.0% 83.3%
4191032 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.75 63.0 6.34e-01 100.0% 98.0%
3587304 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 61.0 5.22e-01 98.0% 56.5%
3960483 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 63.0 6.33e-01 98.0% 98.0%
3838564 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 61.0 5.82e-01 98.0% 81.7%
3979434 101.1.9.101 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1441 0.73 62.0 6.12e-01 100.0% 90.9%
4181286 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.72 57.0 6.01e-01 96.0% 97.8%
4668740 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.71 60.0 4.82e-01 100.0% 48.6%
5058447 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 44.0 4.26e-01 74.0% 58.2%
3288390 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.70 59.0 5.26e-01 100.0% 90.7%
3285380 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.69 58.0 4.44e-01 100.0% 43.2%
5010219 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 47.0 5.09e-01 78.0% 90.0%
3284686 101.1.9.84 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.69 58.0 3.82e-01 100.0% 97.4%
4991574 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 4.92e-01 86.0% 67.7%
3976327 101.1.9.41 alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N 0.69 46.0 4.84e-01 70.0% 82.2%
3587879 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.69 57.0 4.57e-01 100.0% 46.4%
3966276 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.68 60.0 4.65e-01 100.0% 72.7%
5000254 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.68 57.0 5.77e-01 100.0% 100.0%
5007668 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.68 57.0 4.38e-01 100.0% 53.6%
2325046 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.68 59.0 4.46e-01 100.0% 42.5%
3974460 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.67 56.0 4.27e-01 100.0% 50.8%
3590098 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.67 55.0 4.36e-01 100.0% 44.3%
2876157 101.1.9.105 alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 0.67 56.0 5.58e-01 100.0% 92.5%
3941757 101.1.9.32 alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.66 55.0 4.22e-01 100.0% 63.8%
3958314 101.1.9.66 alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_wHTH 0.66 52.0 5.13e-01 100.0% 83.6%
None 0.66 55.0 5.04e-01 100.0% 97.1%
4929856 101.1.9.18 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 0.66 54.0 4.63e-01 100.0% 55.6%
4564454 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.65 55.0 4.45e-01 100.0% 47.6%
3288205 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.65 53.0 4.74e-01 100.0% 62.5%
3387406 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.65 53.0 4.37e-01 100.0% 47.6%
3291218 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.65 53.0 4.10e-01 100.0% 51.5%
3948487 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.64 52.0 3.98e-01 100.0% 50.4%
3976015 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.63 51.0 4.57e-01 100.0% 62.5%
3788382 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.62 47.0 4.17e-01 88.0% 72.5%
3959614 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.61 51.0 4.26e-01 100.0% 53.3%
3280706 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.61 50.0 4.45e-01 100.0% 66.3%
4965902 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.11e-01 100.0% 48.6%
4933456 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 49.0 4.37e-01 98.0% 63.7%
5067261 101.1.2.242 alpha arrays › HTH › HTH › winged helix domain › RepL 0.60 49.0 4.32e-01 100.0% 61.3%
3953113 101.1.2.246 alpha arrays › HTH › HTH › winged helix domain › HTH_PafC 0.59 50.0 3.80e-01 100.0% 46.2%
3386729 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.58 48.0 4.46e-01 100.0% 75.0%
1856688 101.1.2.35 alpha arrays › HTH › HTH › winged helix domain › TFIIF_beta 0.58 46.0 4.20e-01 100.0% 66.2%
4633347 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.57 49.0 4.90e-01 100.0% 100.0%
4196673 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.57 46.0 4.59e-01 100.0% 92.7%
3800155 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.56 45.0 4.00e-01 100.0% 62.4%
3703451 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.56 49.0 4.10e-01 100.0% 55.6%
5035914 2007.1.14.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › ZnuA 0.56 42.0 3.22e-01 92.0% 87.3%
3180104 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.55 46.0 3.92e-01 100.0% 55.6%
4957076 101.1.9.134 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 0.55 43.0 4.23e-01 100.0% 86.7%
3491271 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.54 44.0 3.87e-01 100.0% 58.8%
4960354 101.1.2.507 alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 0.53 42.0 3.32e-01 98.0% 46.4%