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KP696448.1__AKC02651.1__CPT_Stills23__00023

Bact-Vir

KP696448.1__AKC02651.1__CPT_Stills23__00023

Identity

Accession:
KP696448 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-61
PDB
Domain cluster: representative
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 64.0 6.57e-01 100.0% 94.5%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 59.0 5.71e-01 100.0% 71.2%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 55.0 5.56e-01 98.3% 75.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 57.0 5.54e-01 98.3% 71.2%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 61.0 6.19e-01 100.0% 89.7%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 52.0 5.63e-01 94.9% 89.8%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.73 51.0 5.41e-01 100.0% 88.0%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 5.42e-01 100.0% 67.5%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 59.0 5.21e-01 100.0% 64.0%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 49.0 4.37e-01 96.6% 51.8%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.23e-01 98.3% 80.6%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.66 55.0 5.12e-01 100.0% 72.7%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 58.0 5.67e-01 98.3% 87.7%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 5.59e-01 100.0% 88.2%
7c2fB01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.63 36.0 3.20e-01 100.0% 37.2%
1wgeA00 3.10.660.10 Alpha Beta › Roll › Microbial ribonuclease fold › DPH Zinc finger 0.63 46.0 4.14e-01 78.0% 69.9%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 55.0 5.01e-01 100.0% 87.5%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.63 55.0 4.75e-01 100.0% 69.9%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 45.0 3.62e-01 100.0% 41.1%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.53e-01 100.0% 71.2%
2kcmA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 41.0 3.85e-01 74.6% 90.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 42.0 4.06e-01 98.3% 66.7%
4gi3C00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.58 36.0 3.72e-01 98.3% 64.9%
1xf1A02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.58 49.0 3.79e-01 100.0% 81.1%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.21e-01 98.3% 74.2%
3uoxB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 49.0 3.15e-01 98.3% 46.4%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.28e-01 100.0% 76.5%
1awjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 46.0 4.34e-01 94.9% 75.3%
2w00A02 3.90.640.50 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.57 43.0 4.03e-01 83.1% 84.9%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 48.0 4.69e-01 100.0% 94.1%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 3.81e-01 93.2% 80.6%
5twbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 46.0 3.18e-01 96.6% 49.8%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.11e-01 96.6% 86.8%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 46.0 4.51e-01 100.0% 100.0%
1dj7B00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.55 46.0 4.32e-01 96.6% 94.5%
3odtA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.06e-01 100.0% 85.1%
5nahA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 44.0 2.79e-01 96.6% 42.3%
3bh1A03 3.40.140.40 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain 0.54 46.0 3.54e-01 100.0% 72.6%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 40.0 3.91e-01 79.7% 95.4%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 39.0 3.92e-01 93.2% 78.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 4.25e-01 96.6% 98.1%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 35.0 3.37e-01 79.7% 54.8%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.54 39.0 4.20e-01 96.6% 100.0%
2iq1A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.54 38.0 2.59e-01 78.0% 90.3%
1hqz800 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.53 35.0 2.81e-01 100.0% 30.3%
2l6lA02 3.10.660.10 Alpha Beta › Roll › Microbial ribonuclease fold › DPH Zinc finger 0.53 43.0 4.18e-01 96.6% 81.5%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 45.0 2.95e-01 100.0% 27.2%
2askA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.53 42.0 3.48e-01 84.7% 80.2%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 43.0 4.27e-01 98.3% 90.3%
5x68A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 2.78e-01 100.0% 26.1%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 42.0 3.84e-01 91.5% 91.3%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 42.0 4.12e-01 94.9% 94.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 4.14e-01 100.0% 88.7%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.52 42.0 3.04e-01 94.9% 89.4%
5i9eA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.51 40.0 3.36e-01 89.8% 88.5%
2jozA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 39.0 3.44e-01 88.1% 99.0%
7kggC02 3.30.2090.10 Alpha Beta › 2-Layer Sandwich › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.51 39.0 3.45e-01 86.4% 84.8%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.51 42.0 3.97e-01 96.6% 79.7%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 41.0 4.09e-01 96.6% 100.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 41.0 4.03e-01 100.0% 94.3%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 39.0 4.03e-01 96.6% 100.0%
1c0gA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.50 39.0 3.49e-01 89.8% 79.3%
6jzaA00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.50 30.0 2.75e-01 94.9% 44.4%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959440 4.1.1.180 beta barrels › SH3 › SH3 › SH3 › DUF3107 0.82 73.0 7.15e-01 100.0% 98.5%
25624 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.82 65.0 6.90e-01 98.3% 98.1%
3968342 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.81 65.0 6.79e-01 98.3% 96.2%
3977126 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.80 65.0 6.73e-01 100.0% 94.5%
135648 4.1.1.142 beta barrels › SH3 › SH3 › SH3 › Hfq_1 0.78 59.0 5.76e-01 98.3% 73.8%
858452 4.1.1.476 beta barrels › SH3 › SH3 › SH3 › PF30873 0.77 60.0 5.14e-01 100.0% 53.1%
4400642 4.1.1.257 beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.76 57.0 5.08e-01 98.3% 56.5%
3979842 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.76 61.0 6.27e-01 100.0% 94.5%
4368811 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.76 57.0 5.92e-01 100.0% 87.3%
3839016 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 58.0 5.61e-01 100.0% 75.4%
4932434 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.75 57.0 5.41e-01 100.0% 70.0%
5074749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 56.0 5.31e-01 100.0% 68.6%
4142364 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 51.0 5.01e-01 96.6% 66.2%
2697704 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 52.0 5.03e-01 100.0% 67.7%
4139090 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.73 54.0 5.62e-01 100.0% 87.3%
3603549 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 66.0 5.93e-01 100.0% 73.1%
5027750 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 56.0 5.73e-01 100.0% 90.9%
185635 4.1.1.391 beta barrels › SH3 › SH3 › SH3 › FDF, PF30873 0.73 57.0 4.51e-01 100.0% 42.1%
5015352 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.30e-01 100.0% 65.1%
5029405 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.72 54.0 5.52e-01 100.0% 87.3%
4998113 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.72 50.0 5.43e-01 93.2% 97.8%
5028741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 54.0 5.58e-01 96.6% 89.1%
3290899 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 55.0 5.20e-01 100.0% 71.4%
4068333 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 56.0 5.45e-01 96.6% 78.5%
5000741 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.71 55.0 5.38e-01 100.0% 76.9%
5056826 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.70 55.0 5.38e-01 100.0% 80.0%
5080336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 54.0 5.31e-01 100.0% 79.7%
5062120 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.09e-01 100.0% 67.6%
4044269 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.69 53.0 5.11e-01 100.0% 72.9%
5048974 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 4.97e-01 100.0% 55.5%
3625817 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.69 58.0 5.28e-01 100.0% 70.0%
4187800 4.1.1.39 beta barrels › SH3 › SH3 › SH3 › SHD1 0.69 51.0 5.13e-01 94.9% 80.0%
4226849 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 55.0 5.04e-01 100.0% 66.3%
4302391 4.1.1.398 beta barrels › SH3 › SH3 › SH3 › YolD 0.68 51.0 5.04e-01 93.2% 75.4%
4971470 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 54.0 5.04e-01 100.0% 69.3%
3272363 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.68 61.0 5.19e-01 100.0% 63.2%
5050320 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.67 53.0 4.94e-01 100.0% 69.3%
4252954 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 54.0 5.19e-01 100.0% 77.1%
4459365 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 54.0 4.97e-01 100.0% 67.5%
5024227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.58e-01 100.0% 90.5%
4982354 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.67 58.0 5.65e-01 100.0% 89.2%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.66 55.0 5.14e-01 100.0% 74.7%
4532859 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.77e-01 96.6% 95.0%
4979291 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.65 52.0 4.86e-01 100.0% 70.7%
5059830 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.64 56.0 4.88e-01 100.0% 74.4%
4213135 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.63 52.0 4.22e-01 100.0% 46.0%
4158712 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 50.0 4.79e-01 100.0% 75.7%
3954254 4.1.1.387 beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c 0.63 51.0 4.98e-01 100.0% 84.6%
3486496 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 45.0 4.60e-01 96.6% 83.6%
4083915 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 52.0 4.85e-01 100.0% 76.0%
3476178 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 46.0 3.71e-01 100.0% 40.0%
4998329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 42.0 4.36e-01 98.3% 78.2%
3993250 4.1.1.333 beta barrels › SH3 › SH3 › SH3 › PF29330 0.60 43.0 4.39e-01 98.3% 81.8%
3304602 4.1.1.427 beta barrels › SH3 › SH3 › SH3 › F-box 0.60 43.0 3.75e-01 98.3% 48.4%
3593943 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.59 47.0 2.77e-01 89.8% 12.5%
3368254 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.58 43.0 4.42e-01 98.3% 89.1%
3850775 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.58 43.0 4.19e-01 98.3% 73.8%
3419491 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.58e-01 100.0% 86.7%
3834303 109.4.1.257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.58 43.0 2.64e-01 98.3% 11.0%
3475240 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.58 43.0 4.42e-01 93.2% 89.1%
2427475 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 43.0 4.23e-01 100.0% 74.6%
3426874 2487.1.1.7 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.57 49.0 3.86e-01 100.0% 97.0%
3173941 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 43.0 3.69e-01 100.0% 50.0%
3300051 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.56 43.0 4.01e-01 100.0% 66.7%
3834390 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 41.0 4.30e-01 93.2% 94.0%
3475462 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.55 46.0 4.19e-01 100.0% 77.6%
4180367 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.54 44.0 3.34e-01 96.6% 53.9%
3508713 382.1.1.25 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › YjeJ 0.54 46.0 3.75e-01 100.0% 50.8%
4428249 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 38.0 3.01e-01 78.0% 68.6%
3782038 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 40.0 3.51e-01 100.0% 53.0%
4020073 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 44.0 4.23e-01 100.0% 84.3%
4443054 3115.1.1.9 a+b two layers › GP2-like › RplX-like › RplX-like › YjeJ 0.51 42.0 3.52e-01 100.0% 51.7%
4263339 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.51 43.0 3.95e-01 98.3% 77.5%
3581336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 42.0 3.57e-01 100.0% 53.6%
3679362 4.1.1.351 beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 0.50 42.0 3.85e-01 100.0% 96.5%
4132516 4.1.1.253 beta barrels › SH3 › SH3 › SH3 › DUF4537 0.50 42.0 3.89e-01 100.0% 73.8%