←Back to structures
AJP62031.1
Arc-VirKP703175__AJP62031.1__X__00031
Identity
- Accession:
- KP703175 ↗
- Protein ID:
- AJP62031.1 ↗
- Kingdom:
- archaea
Quality
72.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-95
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 45.0 | 3.44e-01 | 86.3% | 70.9% |
| 2fkbC00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.58 | 48.0 | 3.39e-01 | 96.1% | 52.1% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.57 | 40.0 | 2.58e-01 | 80.4% | 53.5% |
| 5undA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.57 | 32.0 | 3.22e-01 | 96.1% | 50.0% |
| 3l2bA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.56 | 43.0 | 3.29e-01 | 82.4% | 93.2% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.55 | 40.0 | 3.47e-01 | 84.3% | 51.3% |
| 3i8nB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 44.0 | 3.37e-01 | 90.2% | 93.7% |
| 2v0cA03 | 2.30.210.10 | Mainly Beta › Roll › Leucyl-tRNA synthetase, domain 3 › Leucyl-tRNA synthetase, domain 3 | 0.55 | 41.0 | 3.99e-01 | 82.4% | 93.0% |
| 3ddjA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 41.0 | 3.20e-01 | 92.2% | 88.2% |
| 3lapA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 3.83e-01 | 90.2% | 85.3% |
| 1xb4B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 3.71e-01 | 88.2% | 88.0% |
| 3hf7A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 42.0 | 3.23e-01 | 90.2% | 94.5% |
| 1zzvA01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.53 | 43.0 | 3.90e-01 | 96.1% | 78.1% |
| 1o50A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 41.0 | 3.14e-01 | 92.2% | 89.4% |
| 3gbyA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 41.0 | 3.18e-01 | 90.2% | 91.3% |
| 3ctuA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 40.0 | 2.93e-01 | 84.3% | 82.1% |
| 2ef7A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 42.0 | 3.22e-01 | 92.2% | 92.1% |
| 1zfjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 41.0 | 2.42e-01 | 90.2% | 24.4% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.51 | 40.0 | 3.25e-01 | 90.2% | 63.9% |
| 3kpbA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 41.0 | 3.19e-01 | 90.2% | 95.8% |
| 3kh5A02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 40.0 | 2.96e-01 | 86.3% | 93.4% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 37.0 | 3.12e-01 | 84.3% | 82.7% |
| 7ahhC02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 37.0 | 3.00e-01 | 78.4% | 81.9% |
| 2ouxA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 41.0 | 3.16e-01 | 94.1% | 89.1% |
| 1wg4A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 38.0 | 3.45e-01 | 86.3% | 66.2% |
| 1rkuA02 | 3.90.1470.10 | Alpha Beta › Alpha-Beta Complex › thrh gene product, domain 2 › thrh gene product, domain 2 | 0.51 | 37.0 | 3.08e-01 | 80.4% | 62.1% |
| 2d5mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 40.0 | 2.93e-01 | 100.0% | 61.2% |
| 3pieA02 | 3.30.1370.250 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.50 | 41.0 | 3.38e-01 | 96.1% | 67.0% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.50 | 40.0 | 3.31e-01 | 92.2% | 71.3% |
| 2nycA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.50 | 41.0 | 3.15e-01 | 92.2% | 86.9% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029896 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.61 | 48.0 | 3.37e-01 | 90.2% | 65.1% |
| 4948421 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 50.0 | 3.90e-01 | 100.0% | 92.2% |
| 5059208 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.57 | 46.0 | 3.26e-01 | 90.2% | 91.5% |
| 3280114 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.56 | 46.0 | 3.46e-01 | 92.2% | 81.5% |
| 3742507 | 376.1.1.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 | 0.55 | 45.0 | 4.21e-01 | 100.0% | 73.8% |
| 5011354 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.55 | 42.0 | 2.95e-01 | 88.2% | 43.2% |
| 5048462 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 42.0 | 3.38e-01 | 98.0% | 70.4% |
| 3174392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.69e-01 | 90.2% | 83.7% |
| 4959628 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.53 | 43.0 | 3.22e-01 | 92.2% | 84.4% |
| 4223228 | 101.1.9.21 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N | 0.53 | 41.0 | 3.54e-01 | 90.2% | 71.1% |
| 4990413 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.53 | 43.0 | 3.36e-01 | 90.2% | 95.8% |
| 3614681 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.53 | 44.0 | 2.77e-01 | 96.1% | 71.1% |
| 5024240 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.53 | 40.0 | 3.12e-01 | 92.2% | 91.4% |
| 3495693 | 70.3.1.2 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › zf-MYND | 0.53 | 46.0 | 3.12e-01 | 100.0% | 58.4% |
| 3384566 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 44.0 | 4.08e-01 | 100.0% | 75.4% |
| 4951211 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.52 | 42.0 | 3.29e-01 | 92.2% | 95.8% |
| 4941351 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.49e-01 | 90.2% | 70.6% |
| 3632795 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.51 | 41.0 | 3.38e-01 | 96.1% | 73.6% |
| 5011930 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 41.0 | 3.27e-01 | 92.2% | 94.8% |
| 4994484 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 41.0 | 3.14e-01 | 90.2% | 94.4% |
| 5063100 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 41.0 | 3.24e-01 | 92.2% | 94.8% |
| 4399101 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.51 | 39.0 | 3.19e-01 | 90.2% | 60.9% |
| 4966075 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 41.0 | 3.13e-01 | 90.2% | 91.2% |
| 3220835 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 35.0 | 2.87e-01 | 76.5% | 44.5% |
| 5082776 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 39.0 | 3.04e-01 | 90.2% | 85.4% |