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KP774835.2__AJT60768.1__X__00064

Bact-Vir

KP774835.2__AJT60768.1__X__00064

Identity

Accession:
KP774835 ↗
Kingdom:
phage

Quality

79.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zobellviridae› Citrovirus› Citrobacter_phage_CVT22

TaxID: 1622234

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-68
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.89 63.0 6.86e-01 100.0% 90.0%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.88 66.0 7.15e-01 100.0% 94.1%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.86 63.0 7.10e-01 96.7% 100.0%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.86 58.0 6.15e-01 100.0% 79.6%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 62.0 6.37e-01 100.0% 79.7%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 59.0 5.65e-01 100.0% 63.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 59.0 6.35e-01 100.0% 88.2%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 62.0 6.46e-01 100.0% 86.0%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 56.0 6.23e-01 95.1% 89.6%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 68.0 6.13e-01 100.0% 69.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 56.0 5.54e-01 100.0% 70.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.79 55.0 6.01e-01 100.0% 91.7%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 65.0 6.72e-01 100.0% 93.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 67.0 6.80e-01 100.0% 93.2%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.78 55.0 5.91e-01 100.0% 86.5%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 55.0 5.18e-01 100.0% 61.6%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 56.0 5.82e-01 100.0% 82.1%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 66.0 6.48e-01 100.0% 85.9%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.78 52.0 5.83e-01 95.1% 91.3%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 66.0 5.20e-01 100.0% 47.1%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 63.0 5.59e-01 100.0% 62.8%
2m0yA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 65.0 6.11e-01 100.0% 75.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 56.0 5.90e-01 100.0% 87.0%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 63.0 6.14e-01 100.0% 84.8%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 61.0 5.95e-01 100.0% 88.2%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.69 54.0 5.33e-01 100.0% 80.6%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 4.94e-01 100.0% 76.7%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 5.13e-01 100.0% 88.5%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 58.0 5.51e-01 100.0% 83.3%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.66 48.0 4.92e-01 100.0% 81.7%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.66 57.0 3.95e-01 100.0% 28.6%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.64 56.0 4.08e-01 100.0% 78.9%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 4.85e-01 100.0% 67.9%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 55.0 5.16e-01 100.0% 84.2%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 41.0 3.73e-01 96.7% 49.4%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.60 52.0 4.71e-01 100.0% 76.2%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 50.0 4.73e-01 100.0% 82.9%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.58 51.0 3.64e-01 100.0% 39.5%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.58 51.0 3.51e-01 100.0% 34.1%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 40.0 4.05e-01 90.2% 77.0%
1khbA03 3.90.228.20 Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › 0.56 47.0 3.19e-01 100.0% 48.5%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 49.0 4.26e-01 100.0% 79.2%
4jlxA02 3.30.460.90 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.54 40.0 3.03e-01 83.6% 80.4%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.53 42.0 3.49e-01 91.8% 48.2%
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.53 43.0 4.14e-01 95.1% 81.1%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 43.0 3.53e-01 93.4% 62.6%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 44.0 3.52e-01 100.0% 95.4%
7jiuA03 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.51 42.0 3.34e-01 95.1% 63.2%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 42.0 3.23e-01 95.1% 67.9%
4oevA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 37.0 2.94e-01 83.6% 41.3%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 42.0 3.33e-01 100.0% 72.5%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3931805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 64.0 7.03e-01 96.7% 94.0%
3840679 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.84 60.0 5.10e-01 100.0% 48.4%
3354687 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.81 59.0 4.68e-01 88.5% 39.2%
3233461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 70.0 7.10e-01 100.0% 93.3%
3930014 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.80 63.0 4.54e-01 95.1% 31.9%
2725406 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 68.0 6.06e-01 100.0% 67.1%
3897333 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.80 69.0 6.19e-01 100.0% 70.0%
3765126 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 68.0 7.12e-01 100.0% 100.0%
3905176 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 68.0 6.71e-01 100.0% 86.2%
3616622 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.93e-01 100.0% 90.5%
3900236 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 68.0 6.92e-01 100.0% 93.3%
3909202 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 68.0 6.50e-01 100.0% 80.0%
3850131 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 68.0 6.02e-01 100.0% 65.9%
3623786 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.80 65.0 6.40e-01 100.0% 81.5%
3550579 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 65.0 6.86e-01 100.0% 96.4%
3479037 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 67.0 6.07e-01 100.0% 68.8%
3909317 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 62.0 6.80e-01 91.8% 100.0%
3998645 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.79 65.0 6.37e-01 100.0% 81.5%
3778124 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.79 65.0 6.36e-01 100.0% 81.5%
3240651 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 66.0 5.93e-01 100.0% 67.5%
3406712 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.22e-01 100.0% 71.2%
158943 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 5.97e-01 100.0% 69.6%
3791430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 63.0 6.63e-01 96.7% 96.4%
3896519 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 60.0 6.59e-01 91.8% 100.0%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 69.0 4.68e-01 100.0% 29.5%
3931369 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 59.0 6.45e-01 93.4% 100.0%
1545879 4.1.1.120 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_16 0.76 70.0 5.82e-01 100.0% 100.0%
3575066 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 68.0 6.92e-01 100.0% 98.3%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 69.0 6.13e-01 100.0% 97.6%
4890270 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.75 53.0 5.59e-01 100.0% 83.3%
3302391 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.75 69.0 5.16e-01 100.0% 51.4%
3399407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 69.0 5.75e-01 100.0% 87.0%
4014881 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 61.0 6.17e-01 100.0% 88.3%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 53.0 5.53e-01 100.0% 81.8%
None — 0.75 68.0 4.06e-01 100.0% 18.0%
3489469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 68.0 5.61e-01 100.0% 79.0%
3588727 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 6.03e-01 100.0% 81.4%
3357239 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.74 68.0 4.91e-01 100.0% 45.6%
3668420 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.74 67.0 4.66e-01 100.0% 38.4%
3300226 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.74 67.0 6.09e-01 100.0% 90.0%
3669214 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.74 67.0 5.15e-01 100.0% 56.2%
3924038 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 68.0 6.32e-01 100.0% 81.3%
4398865 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 68.0 5.75e-01 100.0% 84.2%
4024240 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 60.0 5.48e-01 100.0% 67.5%
4655719 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 68.0 5.87e-01 100.0% 68.9%
3332609 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 65.0 4.99e-01 95.1% 55.2%
3425872 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 65.0 5.70e-01 98.4% 80.0%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 58.0 4.88e-01 100.0% 52.0%
3240407 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 60.0 5.74e-01 100.0% 78.6%
3576443 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 67.0 6.35e-01 100.0% 91.4%
3994911 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 66.0 5.44e-01 100.0% 84.8%
3808601 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 65.0 5.82e-01 100.0% 85.9%
3225816 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 66.0 6.26e-01 100.0% 91.4%
3294025 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 60.0 6.28e-01 93.4% 100.0%
3890362 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.89e-01 93.4% 85.7%
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 50.0 5.07e-01 100.0% 76.7%
3494683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.41e-01 100.0% 77.1%
3923813 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.81e-01 100.0% 86.2%
1545880 4.1.1.278 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.69 61.0 5.59e-01 100.0% 75.0%
3592525 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.03e-01 98.4% 62.7%
3514522 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.67 61.0 5.72e-01 100.0% 86.7%
3592075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 61.0 5.40e-01 100.0% 75.3%
3935507 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 60.0 5.02e-01 100.0% 66.0%
4947695 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.46e-01 100.0% 84.0%
5039349 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 56.0 5.70e-01 98.4% 98.3%
3729666 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 56.0 4.60e-01 100.0% 53.6%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.12e-01 100.0% 75.3%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 57.0 5.23e-01 100.0% 91.3%
3611491 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.63 55.0 3.88e-01 100.0% 76.9%
5054597 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 55.0 5.17e-01 100.0% 82.7%
5012053 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 55.0 5.17e-01 100.0% 85.1%
5041872 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.62 55.0 5.20e-01 100.0% 82.7%
4952114 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.62 54.0 5.23e-01 100.0% 87.1%
3590315 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.60 52.0 4.91e-01 100.0% 82.7%
5018743 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.59 51.0 4.83e-01 100.0% 82.7%
4193599 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 52.0 4.36e-01 100.0% 58.1%
5038431 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.59e-01 100.0% 80.0%
3402051 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.57 42.0 3.91e-01 96.7% 62.8%
3409941 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.56 40.0 3.86e-01 95.1% 67.1%
3389887 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.55 40.0 3.64e-01 96.7% 56.5%
3597372 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.55 47.0 3.05e-01 95.1% 34.7%
None — 0.54 36.0 2.22e-01 73.8% 11.6%
3415678 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.53 39.0 3.84e-01 96.7% 72.1%
3164889 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.53 39.0 3.14e-01 83.6% 46.5%
4972872 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.51 35.0 3.74e-01 100.0% 100.0%