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KP792622.1__AKA60260.1__P8625_09__00009
Bact-VirKP792622.1__AKA60260.1__P8625_09__00009
Identity
- Accession:
- KP792622 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Cluster
View cluster (78 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-228
Domain cluster:
rep: AB044554.1__BAA97847.1__X__00040__D16-168
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05136.19 best | Phage_portal_2 | 51.8 | 9.80e-14 | 97.7% | 47.5% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.68 | 36.0 | 4.18e-01 | 76.3% | 70.1% |
| 1vwxM01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 21.0 | 2.92e-01 | 99.4% | 63.5% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.58 | 23.0 | 3.57e-01 | 99.4% | 96.8% |
| 3qvnA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.55 | 26.0 | 3.16e-01 | 76.3% | 65.0% |
| 2rqtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 20.0 | 3.35e-01 | 94.9% | 98.4% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 19.0 | 3.12e-01 | 96.6% | 91.4% |
| 2d9jA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.52 | 19.0 | 2.73e-01 | 100.0% | 68.4% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 28.0 | 3.04e-01 | 93.2% | 58.4% |
| 4ffkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.52 | 25.0 | 2.89e-01 | 76.8% | 59.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3248395 | 4.1.1.232 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 | 0.60 | 25.0 | 3.70e-01 | 96.6% | 89.3% |
| 3891578 | 4.1.1.232 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 | 0.59 | 24.0 | 3.64e-01 | 97.7% | 91.4% |
| 4185540 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.59 | 28.0 | 3.27e-01 | 76.8% | 60.2% |
| 3721254 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.59 | 28.0 | 3.18e-01 | 76.8% | 57.7% |
| 4353266 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.58 | 27.0 | 3.84e-01 | 76.3% | 98.6% |
| 3742881 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.57 | 29.0 | 3.41e-01 | 75.1% | 67.2% |
| 3587458 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.56 | 21.0 | 3.13e-01 | 72.3% | 77.3% |
| 3520216 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.55 | 23.0 | 3.59e-01 | 96.0% | 98.6% |
| 3665459 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.55 | 25.0 | 3.61e-01 | 76.3% | 97.3% |
| 4016742 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.55 | 21.0 | 3.35e-01 | 97.7% | 90.0% |
| 3486717 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 20.0 | 3.27e-01 | 94.4% | 92.3% |
| 4878827 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.54 | 21.0 | 3.39e-01 | 99.4% | 100.0% |
| 3500084 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 22.0 | 3.38e-01 | 96.6% | 97.1% |
| 3385712 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.52 | 26.0 | 2.88e-01 | 76.8% | 57.0% |
| 3617897 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.51 | 22.0 | 3.20e-01 | 71.8% | 90.7% |