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KP792622.1__AKA60283.1__P8625_32__00032
Bact-VirKP792622.1__AKA60283.1__P8625_32__00032
Identity
- Accession:
- KP792622 ↗
- Kingdom:
- phage
Quality
70.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-52
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 47.0 | 3.94e-01 | 80.0% | 40.5% |
| 3e9eB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.64 | 50.0 | 3.24e-01 | 88.0% | 32.2% |
| 1biqA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.63 | 52.0 | 3.14e-01 | 92.0% | 22.9% |
| 1ka1A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.63 | 41.0 | 2.69e-01 | 80.0% | 15.1% |
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 45.0 | 2.95e-01 | 76.0% | 35.6% |
| 3sigA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.58 | 42.0 | 2.67e-01 | 78.0% | 27.5% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.56 | 49.0 | 3.56e-01 | 100.0% | 66.7% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.56 | 45.0 | 2.78e-01 | 92.0% | 47.4% |
| 2vx7A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 42.0 | 2.53e-01 | 78.0% | 25.3% |
| 6ketA01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.53 | 42.0 | 2.56e-01 | 94.0% | 13.0% |
| 5b3hC01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.50 | 31.0 | 3.24e-01 | 82.0% | 66.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4998400 | 604.39.1.1 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › CbiM | 0.72 | 57.0 | 3.76e-01 | 100.0% | 21.0% |
| 3804658 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.63 | 47.0 | 3.19e-01 | 84.0% | 19.5% |
| 3571018 | 109.4.1.1138 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SCAI | 0.62 | 46.0 | 3.07e-01 | 84.0% | 42.2% |
| 3845513 | 7575.1.1.8 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › SCAI | 0.62 | 46.0 | 3.06e-01 | 84.0% | 42.2% |
| 4028563 | 131.2.1.0 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like | 0.61 | 42.0 | 2.62e-01 | 74.0% | 11.7% |
| 3184929 | 2004.11.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › PEP carboxykinase N-terminal domain › PEP carboxykinase N-terminal domain › PEPCK_ATP | 0.59 | 45.0 | 2.97e-01 | 84.0% | 23.7% |
| 4237263 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.58 | 43.0 | 3.20e-01 | 78.0% | 94.2% |
| 2410294 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.57 | 38.0 | 4.19e-01 | 82.0% | 85.4% |
| 3958822 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 37.0 | 2.69e-01 | 72.0% | 37.3% |
| 3575335 | 109.4.1.415 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_V | 0.53 | 45.0 | 2.82e-01 | 100.0% | 19.0% |