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KP793119.1__ALM64938.1__Phi105_39__00039

Bact-Vir

KP793119.1__ALM64938.1__Phi105_39__00039

Identity

Accession:
KP793119 ↗
Kingdom:
phage

Quality

91.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 21-121
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02086.22 best MethyltransfD12 37.1 4.20e-09 100.0% 40.8%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1booA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 53.0 3.79e-01 93.1% 27.7%
4nesA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 42.0 3.36e-01 90.1% 47.0%
4iw7A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.50 41.0 3.15e-01 87.1% 59.1%
1o6cB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 41.0 3.21e-01 89.1% 43.8%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4967865 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.72 64.0 4.30e-01 100.0% 32.8%
5072475 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.70 63.0 4.27e-01 100.0% 32.5%
5080403 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.69 62.0 4.08e-01 100.0% 41.2%
4935085 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.69 61.0 5.15e-01 99.0% 85.9%
4483400 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.67 61.0 4.04e-01 100.0% 39.1%
5037321 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.67 60.0 4.10e-01 100.0% 41.4%
4938810 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 58.0 3.93e-01 100.0% 34.1%
4968397 2.6.1.8 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › N6_N4_Mtase 0.63 51.0 3.26e-01 84.2% 28.5%
3165282 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.63 57.0 4.16e-01 100.0% 50.9%
4998370 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.63 49.0 3.66e-01 82.2% 75.0%
5064859 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.63 49.0 3.64e-01 82.2% 72.5%
4233076 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.60 53.0 3.81e-01 100.0% 33.4%
4238238 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.55 51.0 3.65e-01 99.0% 65.6%
3278360 7512.1.1.38 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › EryCIII-like_N 0.53 46.0 3.61e-01 93.1% 63.9%
5082463 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.51 42.0 3.25e-01 89.1% 48.0%
4258452 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 32.0 3.04e-01 100.0% 49.2%
3994159 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 43.0 3.33e-01 100.0% 63.0%