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KP836355.1__AJW76898.1__UF08_9__00009

Bact-Vir

KP836355.1__AJW76898.1__UF08_9__00009

Identity

Accession:
KP836355 ↗
Kingdom:
phage

Quality

86.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Marinitoga_camini_virus_1

TaxID: 1629954

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-159
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 38.0 5.76e-01 95.9% 93.8%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.77 37.0 4.50e-01 100.0% 70.2%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 40.0 5.39e-01 89.0% 100.0%
1puzA00 1.10.150.250 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Flavinator of succinate dehydrogenase 0.53 30.0 3.82e-01 81.4% 96.3%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.52 42.0 4.30e-01 84.8% 92.9%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.52 36.0 4.16e-01 81.4% 97.2%
2jugA01 1.10.10.1830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain 0.52 23.0 3.21e-01 77.9% 98.2%
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 34.0 3.78e-01 80.0% 85.8%
4g6tB00 6.10.20.120 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.51 24.0 3.37e-01 93.8% 93.0%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4146353 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.91 45.0 6.25e-01 86.9% 90.0%
4084282 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.89 46.0 6.13e-01 89.0% 88.2%
4439853 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 41.0 5.91e-01 90.3% 95.7%
3587538 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 40.0 5.89e-01 90.3% 97.1%
None — 0.82 39.0 3.32e-01 97.2% 30.9%
5034407 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.81 40.0 5.71e-01 71.7% 98.6%
4511316 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 40.0 4.12e-01 93.8% 51.1%
3587471 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 43.0 4.69e-01 91.0% 63.4%
4577850 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.63 41.0 4.99e-01 100.0% 97.0%
3946553 3226.1.1.1 ↗ alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease 0.55 46.0 3.28e-01 90.3% 79.5%
3437890 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 29.0 3.54e-01 77.9% 86.4%
5027310 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.52 29.0 3.50e-01 98.6% 81.1%
4498876 140.1.1.11 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 0.51 28.0 2.86e-01 100.0% 50.4%
3698887 6110.1.1.1 ↗ alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.51 35.0 2.44e-01 71.0% 20.0%