←Back to structures
KP836355.1__AJW76899.1__UF08_10__00010
Bact-VirKP836355.1__AJW76899.1__UF08_10__00010
Identity
- Accession:
- KP836355 ↗
- Kingdom:
- phage
Quality
69.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-69
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x4uA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 44.0 | 4.04e-01 | 71.7% | 68.1% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 41.0 | 4.30e-01 | 84.9% | 76.6% |
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 43.0 | 4.29e-01 | 86.8% | 74.1% |
| 2luyA01 | 3.30.60.210 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Stc1 domain | 0.55 | 48.0 | 4.71e-01 | 98.1% | 93.0% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.54 | 40.0 | 3.14e-01 | 86.8% | 65.2% |
| 2qdlA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 32.0 | 3.12e-01 | 90.6% | 46.8% |
| 2fclA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.53 | 38.0 | 2.83e-01 | 79.2% | 74.4% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 40.0 | 3.17e-01 | 88.7% | 64.5% |
| 1wxnA00 | 2.20.20.10 | Mainly Beta › Single Sheet › Anthopleurin-A › Anthopleurin-A | 0.52 | 29.0 | 3.23e-01 | 81.1% | 61.9% |
| 3mhsA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 39.0 | 3.10e-01 | 96.2% | 37.8% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3938951 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.80 | 51.0 | 4.75e-01 | 71.7% | 53.8% |
| 4990133 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.77 | 59.0 | 5.89e-01 | 100.0% | 80.0% |
| 3594353 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.76 | 50.0 | 4.65e-01 | 73.6% | 55.4% |
| 3809803 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.76 | 50.0 | 4.66e-01 | 71.7% | 55.4% |
| 3234939 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.75 | 53.0 | 4.91e-01 | 73.6% | 66.2% |
| 3700533 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 52.0 | 3.30e-01 | 100.0% | 14.8% |
| 3591953 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 47.0 | 5.57e-01 | 71.7% | 100.0% |
| 3484196 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.71 | 50.0 | 4.51e-01 | 73.6% | 58.6% |
| 3473689 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.70 | 49.0 | 4.58e-01 | 73.6% | 63.1% |
| 5047375 | 377.1.1.31 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS | 0.68 | 46.0 | 4.58e-01 | 71.7% | 67.3% |
| 3701012 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.67 | 46.0 | 4.16e-01 | 71.7% | 58.6% |
| 3794167 | 376.1.3.30 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › C6_DPF | 0.65 | 51.0 | 4.10e-01 | 84.9% | 54.5% |
| 3804463 | 386.1.1.143 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Znf_XAF1_N | 0.65 | 38.0 | 3.14e-01 | 84.9% | 32.6% |
| 3898766 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.64 | 43.0 | 4.33e-01 | 71.7% | 69.1% |
| 3235494 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.63 | 44.0 | 4.42e-01 | 73.6% | 72.7% |
| 4957926 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.62 | 37.0 | 2.38e-01 | 98.1% | 12.8% |
| 4056117 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.62 | 42.0 | 3.97e-01 | 71.7% | 64.6% |
| 1413813 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.57 | 39.0 | 3.88e-01 | 71.7% | 69.1% |
| 4087568 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.55 | 43.0 | 3.73e-01 | 86.8% | 54.1% |
| 140040 | 4216.1.1.3 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › LFE_1968-like | 0.54 | 40.0 | 3.14e-01 | 86.8% | 65.2% |
| 3645888 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.51 | 38.0 | 2.66e-01 | 83.0% | 25.9% |
| 5023733 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 38.0 | 2.43e-01 | 83.0% | 17.7% |