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KP836356.2__AMS33998.1__UF09_56__00067
Bact-VirKP836356.2__AMS33998.1__UF09_56__00067
Identity
- Accession:
- KP836356 ↗
- Kingdom:
- phage
Quality
61.9
mean pLDDT
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-48
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d5lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 55.0 | 5.48e-01 | 100.0% | 91.1% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 5.12e-01 | 97.6% | 87.5% |
| 3bemB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.63 | 48.0 | 3.07e-01 | 85.4% | 35.9% |
| 2oyyA00 | 6.10.80.10 | Special › Helix non-globular › DNA polymerase; domain 1 › Hexameric tyrosine-coordinated heme protein (HTHP) | 0.63 | 38.0 | 3.19e-01 | 82.9% | 33.8% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 47.0 | 3.38e-01 | 92.7% | 82.6% |
| 3nnqA00 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.59 | 47.0 | 3.81e-01 | 100.0% | 45.3% |
| 3bbzA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.58 | 39.0 | 3.75e-01 | 70.7% | 66.7% |
| 1y74A00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.57 | 38.0 | 3.56e-01 | 70.7% | 80.7% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.55 | 40.0 | 3.51e-01 | 78.0% | 54.8% |
| 2dbhA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 43.0 | 3.56e-01 | 92.7% | 63.3% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.54 | 41.0 | 3.42e-01 | 92.7% | 98.8% |
| 1fc6A01 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.52 | 45.0 | 3.45e-01 | 100.0% | 55.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3243454 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 56.0 | 5.18e-01 | 100.0% | 70.0% |
| 5029950 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 55.0 | 5.19e-01 | 100.0% | 81.8% |
| 3439696 | 101.35.1.1 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 | 0.67 | 54.0 | 4.99e-01 | 100.0% | 70.0% |
| 1068633 | 101.35.1.1 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 | 0.67 | 54.0 | 5.30e-01 | 100.0% | 95.7% |
| 4167193 | 101.35.1.1 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 | 0.67 | 53.0 | 5.24e-01 | 100.0% | 95.6% |
| 5072661 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 53.0 | 4.36e-01 | 100.0% | 56.2% |
| 3244407 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.62 | 47.0 | 4.42e-01 | 100.0% | 71.7% |
| 3464617 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 44.0 | 4.19e-01 | 97.6% | 78.3% |
| 3993019 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.59 | 45.0 | 4.22e-01 | 100.0% | 71.7% |
| 3989506 | 3721.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain | 0.57 | 40.0 | 3.49e-01 | 70.7% | 49.2% |
| 3584398 | 614.1.1.0 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain | 0.57 | 38.0 | 3.51e-01 | 70.7% | 87.3% |
| 4976486 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 43.0 | 4.03e-01 | 100.0% | 70.0% |
| 5011341 | 4049.1.1.0 ↗ | alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like | 0.52 | 42.0 | 3.87e-01 | 100.0% | 90.0% |