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KP861230.1__AJT61383.1__ABA3177_00670__00067

Bact-Vir

KP861230.1__AJT61383.1__ABA3177_00670__00067

Identity

Accession:
KP861230 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vieuvirus› Acinetobacter_phage_YMC11/11/R3177

TaxID: 1628721

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-52_158-170
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.79 56.0 4.17e-01 80.3% 31.2%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.76 55.0 5.06e-01 80.3% 59.7%
1d2mA03 6.10.140.240 Special › Helix non-globular › Helix Hairpins › 0.71 63.0 6.21e-01 100.0% 90.9%
5j1hA01 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 54.0 3.89e-01 86.9% 28.6%
5aj3N01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 45.0 4.01e-01 72.1% 48.4%
2lseA00 1.20.120.1360 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.65 59.0 4.93e-01 100.0% 83.2%
2wvxA04 1.20.1610.10 Mainly Alpha › Up-down Bundle › Glycosyl hydrolase family fold › alpha-1,2-mannosidases domains 0.62 52.0 3.75e-01 91.8% 40.5%
4ie5A02 1.20.58.1470 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FTO C-terminal domain 0.60 50.0 3.92e-01 93.4% 57.5%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5051492 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.89 56.0 5.95e-01 70.5% 72.7%
5029773 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.81 55.0 5.15e-01 78.7% 58.1%
3725474 604.9.1.0 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.79 54.0 5.13e-01 75.4% 61.4%
3212799 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.74 64.0 5.80e-01 100.0% 76.5%
3812592 109.4.1.1948 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle 0.71 55.0 3.95e-01 82.0% 31.2%
3238347 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.65 56.0 3.74e-01 100.0% 97.6%
D2 medium residues 53-157
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ovaA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.55 45.0 3.50e-01 88.6% 86.0%
7sf2A03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 41.0 3.07e-01 87.6% 81.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3173408 2005.1.1.79 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF29926 0.55 45.0 3.68e-01 89.5% 78.0%
4518542 2484.1.1.146 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_Tn3 0.53 46.0 3.32e-01 98.1% 86.5%
4029485 2484.1.1.10 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.51 43.0 2.96e-01 98.1% 95.9%
4030539 314.1.1.12 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.51 45.0 3.19e-01 99.0% 46.6%
3263349 2003.1.1.70 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N_2 0.51 44.0 3.69e-01 100.0% 90.8%