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KP869101.1__AKE45141.1__ECTP3_00263__00103
Bact-VirKP869101.1__AKE45141.1__ECTP3_00263__00103
Identity
- Accession:
- KP869101 ↗
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Mosigvirus›
Escherichia_coli_O157_typing_phage_3
TaxID: 1508678
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-41
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jr7A02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.79 | 62.0 | 6.26e-01 | 100.0% | 89.5% |
| 3fdjA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.75 | 57.0 | 5.80e-01 | 100.0% | 89.5% |
| 6cngA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.75 | 57.0 | 5.71e-01 | 100.0% | 89.5% |
| 4x9xA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.72 | 54.0 | 3.69e-01 | 100.0% | 22.1% |
| 2g7zA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 54.0 | 3.66e-01 | 100.0% | 21.9% |
| 7z79A02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.65 | 54.0 | 3.64e-01 | 100.0% | 36.3% |
| 3w7tA04 | 3.30.1390.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30p/L7e | 0.65 | 49.0 | 5.11e-01 | 94.7% | 100.0% |
| 3ci0J02 | 2.10.70.20 | Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains | 0.64 | 43.0 | 4.03e-01 | 100.0% | 54.0% |
| 2dbbA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.61 | 52.0 | 3.97e-01 | 100.0% | 79.6% |
| 8onjA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.61 | 50.0 | 3.41e-01 | 100.0% | 37.0% |
| 1vqyB01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 52.0 | 3.93e-01 | 100.0% | 93.7% |
| 1ccwB02 | 3.90.970.10 | Alpha Beta › Alpha-Beta Complex › Glutamate mutase, C-terminal domain › | 0.60 | 44.0 | 4.04e-01 | 97.4% | 69.7% |
| 2drvA00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.60 | 46.0 | 3.00e-01 | 89.5% | 60.2% |
| 1tfrA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.60 | 45.0 | 2.82e-01 | 81.6% | 85.0% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.60 | 47.0 | 4.55e-01 | 97.4% | 100.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.59 | 50.0 | 3.84e-01 | 100.0% | 48.9% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.59 | 49.0 | 2.94e-01 | 100.0% | 38.4% |
| 1pzxA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.59 | 42.0 | 4.28e-01 | 100.0% | 97.1% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 44.0 | 3.08e-01 | 100.0% | 22.9% |
| 1x4rA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.58 | 45.0 | 3.78e-01 | 100.0% | 79.7% |
| 8gk4C02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.57 | 46.0 | 3.45e-01 | 86.8% | 58.5% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 44.0 | 3.52e-01 | 100.0% | 40.0% |
| 1y8xB00 | 3.10.290.20 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 | 0.56 | 42.0 | 3.48e-01 | 100.0% | 51.1% |
| 4tm5A01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.56 | 43.0 | 3.07e-01 | 89.5% | 76.5% |
| 3v67A01 | 3.30.450.210 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Two-component sensor protein CpxA, periplasmic domain | 0.54 | 40.0 | 2.93e-01 | 84.2% | 85.1% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.54 | 44.0 | 2.98e-01 | 97.4% | 43.7% |
| 2rijA02 | 3.30.60.70 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Trimeric LpxA-like enzymes | 0.54 | 41.0 | 4.07e-01 | 92.1% | 85.4% |
| 2w42B01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 42.0 | 2.91e-01 | 94.7% | 64.6% |
| 1kg1A02 | 2.30.30.460 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 4.15e-01 | 94.7% | 100.0% |
| 3mpoA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.53 | 41.0 | 3.08e-01 | 89.5% | 90.7% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.53 | 46.0 | 3.08e-01 | 100.0% | 64.1% |
| 1xvwA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 39.0 | 2.82e-01 | 100.0% | 59.5% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.52 | 37.0 | 2.37e-01 | 86.8% | 78.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973593 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.70 | 58.0 | 3.93e-01 | 97.4% | 25.5% |
| 3947630 | 2484.1.1.56 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDR | 0.69 | 58.0 | 3.31e-01 | 100.0% | 8.5% |
| 2905139 | 4187.1.1.2 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › NosL | 0.62 | 51.0 | 4.58e-01 | 100.0% | 69.0% |
| 4006572 | 171.1.1.12 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › PF28438 | 0.59 | 43.0 | 3.88e-01 | 100.0% | 53.8% |
| 5052172 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.57 | 42.0 | 2.55e-01 | 92.1% | 36.0% |
| 3508711 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.56 | 45.0 | 3.14e-01 | 89.5% | 64.9% |
| 3716865 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 41.0 | 3.46e-01 | 100.0% | 42.5% |
| 3587556 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.52 | 43.0 | 3.66e-01 | 100.0% | 82.9% |
| 2895924 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.52 | 39.0 | 2.45e-01 | 97.4% | 34.9% |
| 4027705 | 1.1.7.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Aquarius_N_2nd | 0.52 | 38.0 | 2.81e-01 | 94.7% | 62.1% |
| 3588905 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.50 | 34.0 | 3.25e-01 | 100.0% | 56.0% |