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KP869107.1__AKE46440.1__ECTP9_01611__00050

Bact-Vir

KP869107.1__AKE46440.1__ECTP9_01611__00050

Identity

Accession:
KP869107 ↗
Kingdom:
phage

Quality

62.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Uetakevirus› Escherichia_coli_O157_typing_phage_9

TaxID: 1508684

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 68-140
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17948.7 best DnaT 60.8 1.20e-16 95.9% 94.2%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ou7A00 1.10.8.1180 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.99 90.0 9.14e-01 93.2% 95.8%
3zfiA00 1.10.890.40 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › 0.66 53.0 4.98e-01 91.8% 90.3%
2p1aB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.65 51.0 4.01e-01 83.6% 95.9%
2r3bA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.61 51.0 3.51e-01 95.9% 83.3%
1aj5A00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 47.0 3.53e-01 82.2% 72.3%
1v32A00 1.10.245.10 Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain 0.59 33.0 3.02e-01 89.0% 39.6%
1w5sA01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.59 46.0 4.34e-01 94.5% 70.5%
1j5sA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 43.0 2.76e-01 78.1% 93.3%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.58 50.0 3.78e-01 100.0% 73.8%
2i7aA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 47.0 3.81e-01 100.0% 46.5%
4g41A00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.56 45.0 3.18e-01 89.0% 95.3%
3vygE00 1.10.472.20 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Nitrile hydratase, beta subunit 0.56 44.0 3.52e-01 87.7% 52.3%
2l5aA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.55 47.0 3.34e-01 95.9% 63.1%
1f4qA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 45.0 3.56e-01 100.0% 42.2%
4iuwA02 1.10.1380.10 Mainly Alpha › Orthogonal Bundle › Neutral endopeptidase; domain 2 › Neutral endopeptidase , domain2 0.54 46.0 2.98e-01 93.2% 93.5%
2imsA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.53 47.0 3.58e-01 95.9% 76.1%
1q1gA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.53 44.0 3.10e-01 93.2% 91.8%
2gf4A00 1.20.1270.110 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 0.52 41.0 3.89e-01 86.3% 76.1%
5k29A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.52 40.0 3.70e-01 97.3% 64.9%
1eteA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 45.0 3.73e-01 98.6% 68.7%
2lyiA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.51 42.0 3.46e-01 97.3% 51.4%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4110198 103.14.1.1 ↗ alpha arrays › RuvA-C › DnaT DNA-binding domain › DnaT DNA-binding domain › DnaT 0.98 94.0 8.43e-01 98.6% 78.7%
5022013 632.7.1.61 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › BREX_BrxC_helical 0.67 41.0 3.44e-01 90.4% 37.5%
3730970 7579.1.1.95 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Hydrolase_4 0.63 49.0 3.27e-01 84.9% 87.8%
3678963 148.1.3.205 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_At3g28540 0.62 52.0 4.82e-01 90.4% 87.8%
3493683 3877.1.1.1 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP 0.61 49.0 3.39e-01 83.6% 87.6%
5057661 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.59 33.0 3.12e-01 93.2% 45.9%
3891435 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.57 32.0 3.65e-01 72.6% 80.0%
161715 108.1.1.42 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › CAPN13-like_C_EFh 0.56 47.0 4.37e-01 100.0% 74.5%
3389562 108.1.1.30 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 0.54 48.0 3.30e-01 100.0% 76.0%
3724533 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 44.0 3.74e-01 90.4% 65.8%
3876214 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 43.0 3.78e-01 90.4% 87.0%
4937740 206.1.1.14 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.53 45.0 2.84e-01 94.5% 77.7%
5063806 3896.1.2.0 ↗ alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase 0.53 41.0 3.47e-01 90.4% 97.1%
4153338 101.1.2.567 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF222 0.51 40.0 3.21e-01 86.3% 48.4%
3277613 109.3.1.157 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF222 0.51 40.0 3.12e-01 86.3% 43.6%