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KP881232.1__AKE44729.1__Sm_phiM9_101__00098
Bact-VirKP881232.1__AKE44729.1__Sm_phiM9_101__00098
Identity
- Accession:
- KP881232 ↗
- Kingdom:
- phage
Quality
74.0
mean pLDDT
Taxonomy
TaxID: 1636182
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-77
Domain cluster:
rep: MN988534.1__QIG73864.1__EVC06_089__00089__D3-62
CATH (89)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.74 | 63.0 | 5.96e-01 | 100.0% | 80.6% |
| 1urrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 57.0 | 4.67e-01 | 84.9% | 46.4% |
| 4zkfA01 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.72 | 59.0 | 3.58e-01 | 100.0% | 14.5% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 54.0 | 4.75e-01 | 83.0% | 54.3% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.71 | 60.0 | 5.55e-01 | 100.0% | 74.3% |
| 1weyA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 53.0 | 4.31e-01 | 83.0% | 47.1% |
| 3evzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 59.0 | 4.24e-01 | 100.0% | 34.3% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.69 | 58.0 | 5.37e-01 | 100.0% | 77.5% |
| 2o0bA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.69 | 56.0 | 3.85e-01 | 100.0% | 24.4% |
| 4izzB03 | 1.10.10.1670 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain | 0.69 | 48.0 | 3.73e-01 | 73.6% | 92.2% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 52.0 | 4.69e-01 | 84.9% | 60.0% |
| 2py6A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 58.0 | 4.10e-01 | 100.0% | 32.8% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.68 | 58.0 | 5.30e-01 | 100.0% | 75.3% |
| 1zkdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 56.0 | 4.08e-01 | 100.0% | 32.6% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.67 | 47.0 | 4.35e-01 | 81.1% | 56.3% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 47.0 | 4.17e-01 | 84.9% | 48.2% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.67 | 58.0 | 4.81e-01 | 100.0% | 76.8% |
| 1whrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.67 | 56.0 | 4.38e-01 | 100.0% | 42.7% |
| 8c9vA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 57.0 | 3.98e-01 | 100.0% | 29.8% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 49.0 | 4.41e-01 | 83.0% | 62.0% |
| 1x19A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 54.0 | 4.00e-01 | 100.0% | 36.3% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.66 | 49.0 | 3.79e-01 | 83.0% | 37.7% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.66 | 55.0 | 4.13e-01 | 94.3% | 41.4% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.66 | 55.0 | 3.97e-01 | 100.0% | 76.0% |
| 1dusA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 56.0 | 3.90e-01 | 100.0% | 28.4% |
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 48.0 | 4.57e-01 | 79.2% | 66.7% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.65 | 56.0 | 4.60e-01 | 100.0% | 62.1% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.65 | 49.0 | 4.66e-01 | 90.6% | 69.1% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 48.0 | 3.98e-01 | 83.0% | 43.9% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.64 | 52.0 | 4.29e-01 | 100.0% | 47.7% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.64 | 53.0 | 4.16e-01 | 100.0% | 62.4% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.64 | 47.0 | 4.17e-01 | 83.0% | 56.1% |
| 2zbiA02 | 3.30.70.2120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 47.0 | 3.82e-01 | 83.0% | 67.9% |
| 3pqvC01 | 3.65.10.20 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain | 0.63 | 52.0 | 3.47e-01 | 100.0% | 27.1% |
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 46.0 | 4.07e-01 | 84.9% | 51.2% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.63 | 48.0 | 3.58e-01 | 90.6% | 29.9% |
| 4rl1A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.63 | 47.0 | 4.33e-01 | 84.9% | 62.0% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.62 | 52.0 | 4.80e-01 | 98.1% | 94.4% |
| 3dmgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 51.0 | 3.66e-01 | 100.0% | 28.8% |
| 2kkhA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 46.0 | 4.21e-01 | 84.9% | 58.7% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.62 | 45.0 | 3.51e-01 | 81.1% | 35.7% |
| 4fppA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.61 | 50.0 | 3.87e-01 | 98.1% | 68.6% |
| 1i6uA01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.61 | 49.0 | 4.71e-01 | 100.0% | 77.9% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 43.0 | 3.53e-01 | 75.5% | 59.0% |
| 4lq0A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 53.0 | 3.87e-01 | 100.0% | 46.3% |
| 1nv8A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 47.0 | 3.31e-01 | 92.5% | 25.9% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.60 | 43.0 | 3.94e-01 | 84.9% | 61.0% |
| 2n3lA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 44.0 | 3.82e-01 | 83.0% | 52.8% |
| 1qupA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 43.0 | 4.06e-01 | 84.9% | 62.9% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.59 | 47.0 | 3.70e-01 | 94.3% | 42.1% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 47.0 | 3.55e-01 | 100.0% | 35.0% |
| 1j71A02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.59 | 46.0 | 3.31e-01 | 86.8% | 88.2% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.59 | 44.0 | 3.92e-01 | 81.1% | 73.7% |
| 1hxmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 3.83e-01 | 96.2% | 57.0% |
| 4qpkB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.58 | 48.0 | 3.73e-01 | 100.0% | 68.7% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 50.0 | 4.11e-01 | 100.0% | 59.0% |
| 4e9jA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 42.0 | 3.96e-01 | 83.0% | 72.5% |
| 1g6sA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.58 | 47.0 | 3.29e-01 | 100.0% | 26.0% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 44.0 | 3.73e-01 | 88.7% | 62.9% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 41.0 | 3.29e-01 | 83.0% | 35.2% |
| 3e3xA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.57 | 44.0 | 3.55e-01 | 88.7% | 82.3% |
| 4pbdA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 46.0 | 3.80e-01 | 94.3% | 66.7% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 4.13e-01 | 100.0% | 70.6% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 3.70e-01 | 92.5% | 62.1% |
| 5iceA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 3.30e-01 | 77.4% | 64.4% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 3.77e-01 | 100.0% | 52.7% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 47.0 | 3.90e-01 | 98.1% | 60.2% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 4.37e-01 | 100.0% | 92.2% |
| 1tvdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 3.59e-01 | 96.2% | 61.2% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 3.82e-01 | 96.2% | 61.1% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 3.46e-01 | 100.0% | 39.0% |
| 2fbiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 3.50e-01 | 100.0% | 43.4% |
| 2pcrA02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.54 | 43.0 | 3.58e-01 | 100.0% | 47.0% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 3.47e-01 | 100.0% | 43.4% |
| 4r3aA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 43.0 | 3.39e-01 | 100.0% | 62.7% |
| 2f68X02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 44.0 | 3.26e-01 | 98.1% | 56.8% |
| 2fswA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 44.0 | 3.73e-01 | 100.0% | 57.8% |
| 2b0lC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 44.0 | 3.78e-01 | 100.0% | 59.6% |
| 3cuqB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 4.10e-01 | 100.0% | 82.5% |
| 1z7uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 3.66e-01 | 100.0% | 53.6% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.65e-01 | 100.0% | 62.1% |
| 5xnsC00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.53 | 43.0 | 4.08e-01 | 100.0% | 85.7% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.04e-01 | 90.6% | 72.0% |
| 1ku9B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.76e-01 | 98.1% | 67.8% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 43.0 | 3.25e-01 | 100.0% | 41.5% |
| 1u5tB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.67e-01 | 100.0% | 83.5% |
| 4y66F01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 4.04e-01 | 100.0% | 89.4% |
| 3vlaA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 39.0 | 2.66e-01 | 86.8% | 44.7% |
| 2pg4A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.55e-01 | 100.0% | 68.1% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3923566 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.83 | 63.0 | 5.41e-01 | 81.1% | 56.2% |
| 4944025 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.82 | 59.0 | 5.38e-01 | 83.0% | 58.6% |
| 4030325 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.79 | 59.0 | 4.59e-01 | 84.9% | 37.4% |
| 5056296 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.74 | 52.0 | 5.07e-01 | 83.0% | 66.7% |
| 3407611 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.74 | 62.0 | 5.61e-01 | 100.0% | 68.0% |
| 3820397 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.74 | 62.0 | 5.18e-01 | 100.0% | 53.7% |
| 3552466 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.73 | 61.0 | 5.67e-01 | 100.0% | 72.9% |
| 3987672 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.73 | 63.0 | 5.84e-01 | 100.0% | 80.9% |
| 5035705 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.72 | 53.0 | 4.59e-01 | 83.0% | 50.6% |
| 3478525 | 320.1.1.7 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › PUS7L_N | 0.72 | 60.0 | 5.48e-01 | 100.0% | 80.0% |
| 3357806 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.72 | 60.0 | 5.69e-01 | 100.0% | 78.5% |
| 5022357 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.72 | 50.0 | 4.87e-01 | 81.1% | 66.7% |
| 3606618 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.71 | 61.0 | 5.18e-01 | 100.0% | 57.8% |
| 3236950 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.71 | 61.0 | 5.65e-01 | 100.0% | 78.6% |
| 3685642 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.71 | 59.0 | 5.31e-01 | 100.0% | 91.3% |
| 3898738 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.71 | 54.0 | 4.87e-01 | 84.9% | 60.0% |
| 153276 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.71 | 60.0 | 5.55e-01 | 100.0% | 74.3% |
| 3206206 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.71 | 58.0 | 5.36e-01 | 100.0% | 97.3% |
| 3698585 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.70 | 60.0 | 5.32e-01 | 100.0% | 66.3% |
| 3314359 | 320.1.1.11 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › PF27261 | 0.70 | 59.0 | 5.40e-01 | 100.0% | 70.7% |
| 3788795 | 320.5.1.0 ↗ | a+b two layers › R3H domain-like | 0.70 | 59.0 | 4.84e-01 | 100.0% | 64.8% |
| 3188029 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.70 | 58.0 | 5.42e-01 | 100.0% | 100.0% |
| 4017553 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.70 | 60.0 | 5.05e-01 | 100.0% | 55.8% |
| 5043133 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.70 | 53.0 | 4.20e-01 | 83.0% | 95.5% |
| 3743748 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 58.0 | 5.01e-01 | 100.0% | 61.1% |
| 5034627 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.69 | 50.0 | 2.79e-01 | 77.4% | 11.7% |
| 3271317 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.69 | 57.0 | 4.86e-01 | 100.0% | 54.7% |
| 3632622 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.69 | 58.0 | 4.71e-01 | 100.0% | 53.6% |
| 4019210 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.69 | 58.0 | 5.40e-01 | 100.0% | 75.7% |
| 5075416 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.69 | 58.0 | 4.70e-01 | 100.0% | 59.1% |
| 3543869 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.68 | 57.0 | 4.88e-01 | 100.0% | 58.9% |
| 3840730 | 320.1.1.7 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › PUS7L_N | 0.68 | 56.0 | 5.09e-01 | 100.0% | 92.5% |
| 3395407 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.68 | 58.0 | 5.08e-01 | 100.0% | 62.4% |
| 5023137 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.68 | 59.0 | 3.90e-01 | 100.0% | 23.6% |
| 3826053 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.68 | 49.0 | 4.19e-01 | 83.0% | 46.7% |
| 5070838 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.68 | 56.0 | 3.94e-01 | 98.1% | 28.4% |
| 4937023 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.68 | 58.0 | 4.78e-01 | 100.0% | 68.0% |
| 3272707 | 327.11.2.39 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_3 | 0.67 | 49.0 | 4.63e-01 | 84.9% | 64.6% |
| 4995776 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 54.0 | 5.07e-01 | 100.0% | 71.4% |
| 3735923 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.67 | 50.0 | 2.84e-01 | 83.0% | 7.7% |
| 3992039 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.67 | 57.0 | 4.81e-01 | 100.0% | 59.6% |
| 3025909 | 2003.1.5.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_3 | 0.66 | 57.0 | 3.95e-01 | 100.0% | 28.9% |
| 3740540 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.66 | 57.0 | 5.03e-01 | 100.0% | 66.3% |
| 3333203 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 47.0 | 3.78e-01 | 83.0% | 36.5% |
| 3892180 | 327.16.1.13 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › KH_PARP14_2 | 0.65 | 45.0 | 4.43e-01 | 83.0% | 66.7% |
| 4984986 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.65 | 48.0 | 4.60e-01 | 81.1% | 66.2% |
| 4972219 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.64 | 54.0 | 4.91e-01 | 100.0% | 72.0% |
| 148155 | 304.37.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr | 0.64 | 53.0 | 3.88e-01 | 96.2% | 51.6% |
| 5000359 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.64 | 50.0 | 4.52e-01 | 86.8% | 61.3% |
| 5009157 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.64 | 54.0 | 4.38e-01 | 100.0% | 69.1% |
| 5013990 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 51.0 | 3.97e-01 | 90.6% | 76.7% |
| 3664564 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.63 | 47.0 | 4.53e-01 | 83.0% | 71.7% |
| 4956507 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.63 | 47.0 | 3.60e-01 | 84.9% | 34.1% |
| 3366336 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.62 | 47.0 | 5.01e-01 | 81.1% | 97.7% |
| 4945662 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.62 | 52.0 | 4.97e-01 | 100.0% | 83.1% |
| 5012958 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.62 | 53.0 | 4.07e-01 | 100.0% | 43.8% |
| 4991848 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.62 | 43.0 | 3.91e-01 | 84.9% | 51.2% |
| 4341023 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.61 | 49.0 | 4.76e-01 | 100.0% | 81.5% |
| 3972071 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.61 | 48.0 | 4.35e-01 | 96.2% | 62.5% |
| 4959437 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.61 | 44.0 | 4.22e-01 | 81.1% | 68.8% |
| 5024285 | 3501.1.1.2 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › DUF2067 | 0.60 | 45.0 | 4.26e-01 | 81.1% | 66.2% |
| 2319350 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.60 | 45.0 | 4.17e-01 | 83.0% | 62.0% |
| 4285070 | 304.24.1.4 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › RF3_C | 0.60 | 45.0 | 4.06e-01 | 84.9% | 77.5% |
| 4172564 | 101.1.9.134 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 | 0.60 | 42.0 | 4.10e-01 | 83.0% | 66.7% |
| 3743344 | 101.1.2.251 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6581 | 0.60 | 52.0 | 4.43e-01 | 100.0% | 81.1% |
| 4979624 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 51.0 | 4.10e-01 | 100.0% | 59.1% |
| 3816888 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.60 | 43.0 | 4.05e-01 | 84.9% | 61.4% |
| 3736628 | 101.1.2.251 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6581 | 0.60 | 50.0 | 4.33e-01 | 100.0% | 87.8% |
| 4977859 | 2484.1.1.22 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF99 | 0.59 | 51.0 | 3.54e-01 | 100.0% | 37.9% |
| 2142230 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 43.0 | 4.23e-01 | 79.2% | 75.0% |
| 2101440 | 244.1.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › FAD_binding_3 | 0.59 | 43.0 | 3.67e-01 | 84.9% | 44.9% |
| 139726 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.59 | 42.0 | 3.31e-01 | 81.1% | 34.6% |
| 3519959 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.59 | 42.0 | 4.00e-01 | 86.8% | 64.6% |
| 4359314 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 49.0 | 4.77e-01 | 100.0% | 90.0% |
| 3309598 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 47.0 | 4.23e-01 | 100.0% | 69.4% |
| 3370400 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 48.0 | 4.48e-01 | 100.0% | 75.7% |
| 5052340 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 4.37e-01 | 100.0% | 92.9% |
| 4623039 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.55 | 47.0 | 4.28e-01 | 100.0% | 78.7% |
| 3651303 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.54 | 39.0 | 3.82e-01 | 83.0% | 71.7% |
| 4033853 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.54 | 45.0 | 3.79e-01 | 100.0% | 95.0% |
| 4943350 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 45.0 | 3.79e-01 | 100.0% | 59.6% |
| 3717555 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 46.0 | 2.89e-01 | 98.1% | 28.0% |
| 3997898 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.54 | 47.0 | 3.69e-01 | 100.0% | 58.3% |
| 5000260 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 39.0 | 2.85e-01 | 79.2% | 41.2% |
| 5050401 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 46.0 | 3.82e-01 | 100.0% | 63.0% |
| 3505845 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.54 | 44.0 | 3.76e-01 | 100.0% | 64.0% |
| 5036720 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.53 | 43.0 | 3.84e-01 | 98.1% | 70.2% |
| 3604748 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 46.0 | 3.06e-01 | 98.1% | 30.2% |
| 5045969 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.53 | 45.0 | 3.77e-01 | 98.1% | 65.3% |
| 3402524 | 101.1.2.186 ↗ | alpha arrays › HTH › HTH › winged helix domain › ASH2L-like_WH | 0.53 | 44.0 | 3.74e-01 | 100.0% | 87.4% |
| 3182948 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 37.0 | 3.65e-01 | 84.9% | 69.8% |
| 3782381 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.52 | 43.0 | 3.43e-01 | 100.0% | 64.8% |
| 3586232 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.52 | 44.0 | 2.59e-01 | 100.0% | 14.5% |
| 4995778 | 101.1.2.368 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_36 | 0.52 | 43.0 | 3.83e-01 | 100.0% | 69.4% |
| 3601740 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.51 | 42.0 | 2.90e-01 | 100.0% | 37.5% |
| 4651301 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.51 | 42.0 | 3.42e-01 | 100.0% | 54.8% |
| 4962168 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 42.0 | 2.86e-01 | 100.0% | 39.6% |