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KP881232.1__AKE44862.1__Sm_phiM9_235__00231
Bact-VirKP881232.1__AKE44862.1__Sm_phiM9_235__00231
Identity
- Accession:
- KP881232 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Taxonomy
TaxID: 1636182
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-99
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5uj1A03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.59 | 53.0 | 4.35e-01 | 96.9% | 100.0% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 38.0 | 4.58e-01 | 82.7% | 100.0% |
| 2creA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 38.0 | 4.37e-01 | 79.6% | 93.0% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 37.0 | 4.14e-01 | 91.8% | 91.5% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 28.0 | 3.40e-01 | 84.7% | 72.7% |
| 1cf9A01 | 2.40.180.10 | Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain | 0.55 | 48.0 | 3.25e-01 | 99.0% | 80.3% |
| 3l50A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 33.0 | 3.01e-01 | 90.8% | 44.1% |
| 1smxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 28.0 | 2.94e-01 | 70.4% | 55.2% |
| 5nfiB02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 34.0 | 3.12e-01 | 93.9% | 49.6% |
| 1ex0A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.33e-01 | 100.0% | 61.4% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 38.0 | 3.19e-01 | 83.7% | 100.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3738561 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 35.0 | 3.43e-01 | 79.6% | 47.6% |
| 3281773 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.57 | 51.0 | 3.23e-01 | 99.0% | 32.1% |
| 5029082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 49.0 | 4.05e-01 | 100.0% | 68.2% |
| None | — | 0.53 | 46.0 | 3.18e-01 | 99.0% | 41.7% | |
| 3192615 | 868.1.1.8 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › SLS1_C | 0.52 | 46.0 | 3.27e-01 | 100.0% | 64.8% |
| 3672735 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.52 | 31.0 | 3.64e-01 | 78.6% | 90.8% |
| 1100 | 10.1.1.32 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sial-lect-inser | 0.51 | 41.0 | 3.42e-01 | 91.8% | 100.0% |
| 3412870 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 32.0 | 3.55e-01 | 83.7% | 81.3% |