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KP881232.1__AKE44900.1__Sm_phiM9_273__00269

Bact-Vir

KP881232.1__AKE44900.1__Sm_phiM9_273__00269

Identity

Accession:
KP881232 ↗
Kingdom:
phage

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-192
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lhxA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.72 63.0 5.28e-01 92.4% 73.0%
4e69A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.70 62.0 5.15e-01 93.5% 72.6%
4wjmA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.70 61.0 5.09e-01 93.0% 69.9%
6jtdA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.69 61.0 5.37e-01 93.5% 89.5%
1tyyA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.68 59.0 5.02e-01 92.4% 70.0%
6llwB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.68 59.0 5.34e-01 91.9% 89.4%
2acvA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.67 59.0 5.18e-01 94.1% 87.1%
7va8A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.65 57.0 5.03e-01 91.9% 89.3%
4x7rA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.65 58.0 5.58e-01 93.5% 89.2%
5dxfB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.65 60.0 5.34e-01 99.5% 90.0%
3nd5A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 40.0 4.39e-01 83.2% 75.7%
3knzA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.64 37.0 4.11e-01 100.0% 70.5%
1uqtA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.63 55.0 5.03e-01 93.0% 89.7%
2amlA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.63 37.0 4.10e-01 100.0% 71.4%
2btoA01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.62 55.0 4.90e-01 94.6% 100.0%
1o5zA02 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.60 36.0 4.11e-01 79.5% 78.8%
3ksuB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 53.0 5.03e-01 96.8% 97.3%
3i6iA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 52.0 5.21e-01 95.7% 91.9%
3ntvA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 50.0 4.84e-01 98.9% 79.5%
6h0cA02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.59 39.0 4.31e-01 82.7% 80.9%
3zm6A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.59 43.0 4.07e-01 93.0% 61.9%
2h0rA00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.58 51.0 4.82e-01 93.0% 100.0%
4u1qA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 47.0 4.78e-01 98.4% 85.6%
3afmB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 53.0 4.92e-01 99.5% 97.4%
2o07A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 51.0 4.83e-01 95.1% 94.9%
1fg7A01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 44.0 4.31e-01 99.5% 72.7%
2ok8A02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.57 44.0 4.78e-01 90.3% 98.0%
2py6A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 50.0 5.06e-01 99.5% 96.7%
4rxuA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 51.0 5.04e-01 96.8% 96.9%
4jz8B00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.56 49.0 4.19e-01 95.7% 100.0%
1fdrA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.56 43.0 4.71e-01 90.3% 98.7%
3mczA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 50.0 4.53e-01 98.4% 72.0%
2vdwG00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 51.0 4.45e-01 98.9% 90.2%
4bxoA01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 33.0 3.75e-01 91.9% 77.8%
5aunB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 48.0 4.54e-01 94.1% 85.6%
3nwoA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 49.0 4.16e-01 95.7% 82.3%
3k8kA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 50.0 4.00e-01 98.4% 82.3%
3cr8C02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 39.0 3.87e-01 82.7% 68.7%
1wekF01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 43.0 4.33e-01 93.0% 81.8%
2r3sA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 48.0 4.59e-01 98.9% 83.5%
3kjhA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 47.0 4.28e-01 95.7% 83.5%
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 36.0 4.20e-01 87.6% 99.2%
1nijA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 4.50e-01 93.5% 91.0%
2dgdA02 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 36.0 4.18e-01 79.5% 98.4%
2gnoA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 37.0 4.22e-01 100.0% 97.8%
1r6xA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 42.0 4.08e-01 93.5% 74.6%
3gzdA03 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 46.0 4.61e-01 100.0% 90.7%
6gitA02 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.52 45.0 3.71e-01 94.6% 68.8%
4fixA01 3.90.550.60 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.52 48.0 3.69e-01 99.5% 95.8%
3g5tA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 47.0 4.04e-01 100.0% 89.6%
2bpoA04 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.52 42.0 4.47e-01 90.3% 99.4%
1p9oA00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.52 45.0 3.96e-01 93.5% 83.6%
1b2rA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.51 43.0 4.47e-01 89.7% 98.2%
3msrA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 45.0 3.70e-01 97.8% 75.1%
1u04A03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 38.0 3.90e-01 98.9% 80.9%
3x2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 45.0 4.26e-01 98.9% 96.0%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4953328 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.72 63.0 6.38e-01 92.4% 91.4%
4854828 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.72 63.0 5.97e-01 94.1% 96.4%
5079624 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.71 63.0 5.81e-01 93.0% 93.5%
4304220 7512.1.1.53 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › ALG11_N 0.71 63.0 5.26e-01 93.5% 62.3%
5020609 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.70 55.0 6.00e-01 96.8% 96.8%
4987833 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.70 61.0 6.12e-01 92.4% 90.5%
4937008 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.70 61.0 5.95e-01 92.4% 85.2%
3165929 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.69 58.0 5.85e-01 93.0% 86.7%
4938422 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.69 58.0 6.16e-01 93.5% 99.4%
4430737 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.68 60.0 5.45e-01 93.5% 93.1%
4946825 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.68 60.0 5.69e-01 93.0% 86.9%
5057923 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.68 58.0 5.83e-01 92.4% 88.4%
3974887 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.67 60.0 4.99e-01 95.1% 69.2%
3810831 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.67 60.0 5.27e-01 95.1% 93.2%
5021322 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.67 51.0 5.41e-01 92.4% 88.5%
3970864 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.66 58.0 5.79e-01 93.0% 89.5%
5082845 7512.1.1.51 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_2 0.66 56.0 5.66e-01 92.4% 89.1%
5080387 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.66 58.0 5.83e-01 93.0% 98.4%
3248043 7512.1.1.6 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.63 58.0 5.10e-01 96.8% 87.3%
3618420 7512.1.1.54 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 0.63 57.0 5.44e-01 96.8% 84.7%
3322623 129.1.1.95 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Castor_Poll_mid 0.62 48.0 4.82e-01 91.9% 80.5%
3315370 2003.1.1.135 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Castor_Poll_mid 0.62 48.0 4.81e-01 91.9% 80.5%
5040379 2007.3.1.1 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA 0.62 38.0 4.22e-01 81.6% 75.2%
3728884 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.59 55.0 5.04e-01 100.0% 98.3%
3194067 2003.1.1.61 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR 0.59 54.0 3.94e-01 100.0% 51.2%
3597856 7512.1.1.46 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_11 0.59 46.0 4.52e-01 81.6% 84.3%
5064904 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.59 38.0 4.28e-01 85.4% 85.0%
5028568 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.58 47.0 4.41e-01 85.4% 86.9%
4016193 2003.1.1.61 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR 0.57 51.0 4.50e-01 99.5% 65.1%
3376353 2003.1.5.382 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12, Methyltransf_16 0.57 47.0 3.48e-01 86.5% 41.3%
3261825 2007.15.1.0 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase 0.57 31.0 3.67e-01 91.9% 75.2%
4942885 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.57 39.0 4.25e-01 84.9% 85.3%
3163893 7512.1.1.23 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_52 0.57 49.0 5.06e-01 91.9% 98.3%
4309079 2003.1.1.61 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR 0.56 51.0 4.42e-01 98.9% 63.4%
3290921 2003.1.1.61 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR 0.56 52.0 4.53e-01 100.0% 81.8%
5028917 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.55 51.0 5.01e-01 98.9% 94.9%
3169084 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.55 51.0 4.37e-01 100.0% 69.7%
3786620 2003.1.5.201 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25, Methyltransf_31 0.55 50.0 4.26e-01 98.4% 88.9%
3683667 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.55 48.0 4.01e-01 93.5% 72.1%
5060549 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.54 40.0 4.10e-01 97.3% 77.8%
3727331 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.54 49.0 4.41e-01 99.5% 71.9%
3656022 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.54 49.0 4.27e-01 99.5% 91.4%
4958420 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.54 44.0 3.93e-01 87.0% 92.8%
3782751 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.53 47.0 4.73e-01 95.1% 100.0%
4648077 2006.1.6.38 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 0.53 49.0 4.29e-01 99.5% 94.5%
4102484 7516.1.1.5 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD 0.53 42.0 4.11e-01 83.8% 90.0%
3191166 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.53 47.0 4.26e-01 96.8% 82.5%
3175198 2003.1.5.79 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.53 48.0 4.24e-01 98.4% 73.0%
3287224 2003.2.1.2 a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Molybdopterin,Molybdop_Fe4S4 0.53 39.0 3.05e-01 100.0% 35.4%
3783178 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 48.0 4.37e-01 98.4% 77.1%
3725448 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.52 48.0 4.17e-01 100.0% 89.3%
4955052 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.52 47.0 3.87e-01 97.8% 91.6%
3842698 2007.9.1.0 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain 0.52 43.0 3.63e-01 100.0% 52.5%
3314065 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.52 42.0 4.39e-01 99.5% 92.5%
5024535 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.51 36.0 3.15e-01 93.5% 46.7%
4096359 7516.1.1.5 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD 0.51 47.0 4.26e-01 98.9% 90.2%
5033411 2002.1.1.4 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase 0.51 47.0 3.68e-01 98.4% 86.3%
5062874 2004.1.1.343 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.51 36.0 3.43e-01 100.0% 61.4%
5019748 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 33.0 3.97e-01 82.2% 100.0%
4954474 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.51 42.0 3.52e-01 87.6% 81.9%
1885524 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.50 42.0 3.69e-01 89.7% 84.1%
D2 high residues 211-344
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ec2A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.68 51.0 4.93e-01 96.3% 70.2%
2yvqA00 3.40.50.1380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain 0.67 50.0 5.02e-01 84.3% 78.4%
3e82B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 51.0 5.03e-01 99.3% 75.3%
3hbmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.65 51.0 5.10e-01 94.8% 79.4%
3ca8A02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 51.0 4.88e-01 82.8% 92.9%
3hebA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 49.0 4.83e-01 94.0% 75.4%
1zczA01 3.40.50.1380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain 0.63 55.0 5.28e-01 95.5% 94.9%
1ab5A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 44.0 4.62e-01 94.8% 78.4%
4g9bA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.63 50.0 4.90e-01 91.8% 77.0%
4l69A02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.62 50.0 4.61e-01 85.8% 87.5%
5bjuA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 55.0 4.25e-01 97.8% 85.9%
7cpxA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 55.0 4.12e-01 97.0% 46.7%
3kcnB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 42.0 4.22e-01 95.5% 68.6%
1bdbA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 51.0 4.08e-01 90.3% 88.8%
3gmiA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 48.0 4.11e-01 84.3% 78.5%
2cdcA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 46.0 4.15e-01 97.8% 57.4%
3h7aA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 51.0 4.45e-01 94.8% 75.9%
1m6yA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 51.0 4.68e-01 94.8% 70.3%
3wicA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 44.0 4.03e-01 99.3% 57.4%
5f5nA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 51.0 4.04e-01 96.3% 46.7%
1x7dA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 52.0 4.84e-01 97.8% 81.2%
3glvA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 47.0 4.90e-01 85.1% 98.4%
5ze7A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 52.0 5.03e-01 99.3% 94.2%
2cunA02 3.40.50.1260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain 0.59 51.0 4.51e-01 97.0% 90.5%
5zeeB00 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.58 50.0 3.96e-01 96.3% 60.3%
2acfB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.58 47.0 4.35e-01 87.3% 88.4%
1ilvA00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.58 51.0 4.22e-01 97.8% 95.5%
3dl2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 48.0 4.83e-01 95.5% 88.5%
3breB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 42.0 4.15e-01 95.5% 71.3%
2l82A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 48.0 4.55e-01 94.0% 76.5%
6fcxA01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.57 45.0 3.62e-01 86.6% 97.2%
3e8mA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 47.0 4.45e-01 91.8% 77.4%
1v8oH00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.56 45.0 4.55e-01 85.8% 92.6%
7vm0B01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 47.0 3.97e-01 93.3% 82.8%
1z85B02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.56 45.0 4.39e-01 86.6% 88.6%
1cvrA01 3.40.50.10390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1 0.55 41.0 4.40e-01 84.3% 90.6%
1k1eD00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 47.0 4.39e-01 94.0% 74.7%
3cqjA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.53 40.0 3.18e-01 79.9% 70.3%
2lleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 42.0 3.51e-01 85.8% 89.3%
4nq1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 45.0 3.55e-01 95.5% 97.6%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3783676 2003.1.1.65 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 0.69 56.0 5.81e-01 91.8% 93.6%
5082846 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.65 59.0 5.13e-01 100.0% 88.3%
4507921 7543.1.1.2 a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS 0.63 56.0 5.27e-01 96.3% 91.9%
3969623 2003.1.1.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N 0.63 55.0 4.82e-01 95.5% 79.5%
5074239 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.63 52.0 4.83e-01 88.8% 98.8%
4944058 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.62 42.0 4.44e-01 94.8% 78.3%
3693640 2003.1.1.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 0.62 51.0 3.92e-01 89.6% 92.5%
3731655 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.62 52.0 3.94e-01 90.3% 93.4%
4890580 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.61 55.0 5.03e-01 100.0% 87.3%
2775295 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.61 53.0 4.96e-01 95.5% 89.9%
3744746 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.60 45.0 4.42e-01 95.5% 71.7%
4133489 2003.1.1.74 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glu_dehyd_C 0.60 46.0 4.11e-01 97.8% 55.9%
5077782 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.60 48.0 4.39e-01 97.8% 65.1%
4634403 2003.1.5.98 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6-adenineMlase 0.60 48.0 3.98e-01 85.8% 96.2%
4954404 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.60 54.0 4.74e-01 100.0% 90.0%
5028587 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.60 48.0 4.76e-01 85.1% 98.6%
4927337 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.60 47.0 4.51e-01 94.8% 72.3%
4285317 2003.1.1.74 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glu_dehyd_C 0.60 47.0 4.17e-01 97.8% 58.4%
4083307 2003.1.5.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 0.60 52.0 4.37e-01 97.0% 59.1%
4584257 2003.1.5.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 0.59 52.0 4.62e-01 97.0% 68.2%
4504375 7593.1.1.1 a/b three-layered sandwiches › Peroxisome assembly protein 22 › Peroxisome assembly protein 22 › Peroxisome assembly protein 22 › Peroxin-22 0.59 43.0 4.65e-01 83.6% 93.6%
3248027 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.59 51.0 3.51e-01 97.8% 26.3%
None 0.59 52.0 3.88e-01 97.8% 52.9%
None 0.58 51.0 4.42e-01 97.8% 85.6%
5025353 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.58 41.0 3.56e-01 93.3% 45.6%
3716913 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.58 51.0 4.01e-01 97.0% 72.1%
5003218 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.58 51.0 4.40e-01 97.8% 85.5%
None 0.58 51.0 4.34e-01 97.8% 83.1%
2723016 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.58 52.0 4.76e-01 100.0% 86.2%
4945481 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.58 45.0 3.68e-01 82.8% 78.0%
3694546 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.58 48.0 4.36e-01 97.0% 66.7%
4109564 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.58 49.0 4.46e-01 93.3% 97.8%
3475194 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.58 44.0 4.10e-01 82.1% 72.0%
4971774 2007.1.11.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains 0.57 43.0 4.30e-01 98.5% 77.8%
5039764 2004.1.1.1217 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 0.56 49.0 4.13e-01 97.0% 58.3%
4934304 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.56 48.0 3.98e-01 96.3% 51.0%
5040046 4244.1.1.5 a/b three-layered sandwiches › EreA/ChaN-like › EreA/ChaN-like › EreA/ChaN-like › TraB_PrgY_gumN 0.56 44.0 3.95e-01 84.3% 94.2%
3212072 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.55 42.0 3.12e-01 79.1% 72.5%
3619294 2006.1.5.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.55 48.0 3.39e-01 97.8% 58.2%
None 0.55 47.0 4.35e-01 94.8% 73.5%
3915189 2004.1.1.512 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › URGCP 0.54 44.0 3.39e-01 85.1% 52.9%
3174880 2002.1.1.96 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans 0.54 42.0 3.22e-01 82.8% 72.6%
3263185 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.54 47.0 4.38e-01 96.3% 75.9%
3386201 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.53 43.0 3.99e-01 85.8% 74.7%
3244278 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.53 42.0 4.31e-01 85.8% 86.9%
3719657 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.52 40.0 3.04e-01 82.8% 65.2%
3833203 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.52 44.0 3.31e-01 94.8% 74.4%
3664932 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.52 45.0 3.40e-01 96.3% 75.3%
3672327 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.51 41.0 3.99e-01 94.8% 76.7%
3945580 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.50 41.0 3.19e-01 90.3% 76.3%
4185079 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.50 41.0 3.92e-01 86.6% 97.4%