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KP994596.1__AKA61241.1__X__00065
Bact-VirKP994596.1__AKA61241.1__X__00065
Identity
- Accession:
- KP994596 ↗
- Kingdom:
- phage
Quality
96.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 28-82
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4yzwA01 | 1.20.1370.10 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Hemocyanin, N-terminal domain | 0.82 | 67.0 | 4.82e-01 | 89.1% | 35.6% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 53.0 | 4.68e-01 | 72.7% | 55.1% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.72 | 57.0 | 4.60e-01 | 90.9% | 59.3% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.71 | 48.0 | 4.24e-01 | 70.9% | 71.6% |
| 3usyA01 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.70 | 51.0 | 4.26e-01 | 80.0% | 44.8% |
| 3l0mA02 | 1.20.1280.280 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.68 | 57.0 | 5.14e-01 | 96.4% | 97.4% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 47.0 | 4.56e-01 | 81.8% | 65.0% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 46.0 | 4.58e-01 | 74.5% | 67.2% |
| 3vurA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 53.0 | 4.26e-01 | 87.3% | 72.6% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.68 | 48.0 | 5.01e-01 | 74.5% | 87.8% |
| 4hkaA02 | 1.10.287.3810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 45.0 | 4.67e-01 | 70.9% | 76.5% |
| 3pvuA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.67 | 49.0 | 4.41e-01 | 80.0% | 86.3% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 57.0 | 4.30e-01 | 98.2% | 54.9% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 45.0 | 4.35e-01 | 74.5% | 60.9% |
| 1vw4L01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.67 | 58.0 | 4.34e-01 | 98.2% | 60.7% |
| 2ii2A04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.65 | 46.0 | 4.19e-01 | 78.2% | 60.8% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.65 | 54.0 | 4.28e-01 | 96.4% | 80.2% |
| 4rg6A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 49.0 | 4.46e-01 | 85.5% | 63.6% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 46.0 | 4.06e-01 | 76.4% | 88.6% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 45.0 | 3.81e-01 | 80.0% | 45.5% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 52.0 | 4.19e-01 | 92.7% | 72.3% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.63 | 50.0 | 4.40e-01 | 92.7% | 68.5% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.63 | 45.0 | 4.13e-01 | 76.4% | 57.5% |
| 2dk8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 48.0 | 4.65e-01 | 87.3% | 100.0% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 49.0 | 4.77e-01 | 83.6% | 89.8% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.62 | 44.0 | 4.02e-01 | 76.4% | 56.0% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.62 | 51.0 | 4.46e-01 | 92.7% | 77.6% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.61 | 50.0 | 3.90e-01 | 92.7% | 97.5% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 50.0 | 3.54e-01 | 100.0% | 71.1% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 44.0 | 3.54e-01 | 81.8% | 66.7% |
| 2ii2A02 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.59 | 43.0 | 4.26e-01 | 80.0% | 81.0% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 48.0 | 3.53e-01 | 90.9% | 37.8% |
| 4q5rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 48.0 | 3.88e-01 | 92.7% | 72.3% |
| 2cwqA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.58 | 47.0 | 3.76e-01 | 98.2% | 44.4% |
| 3l09A01 | 1.20.58.1460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 44.0 | 3.79e-01 | 90.9% | 76.5% |
| 4bjtA02 | 1.10.10.2170 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 42.0 | 4.30e-01 | 92.7% | 92.0% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 47.0 | 3.73e-01 | 98.2% | 87.5% |
| 3woyA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 45.0 | 3.02e-01 | 94.5% | 75.2% |
| 3ez0C00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 49.0 | 3.31e-01 | 100.0% | 64.4% |
| 1tu9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 42.0 | 3.30e-01 | 89.1% | 58.8% |
| 2ga1A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 42.0 | 3.97e-01 | 92.7% | 83.1% |
| 1wixA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.54 | 41.0 | 3.24e-01 | 96.4% | 100.0% |
| 4evfA01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.52 | 38.0 | 3.62e-01 | 83.6% | 66.2% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3214996 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.82 | 56.0 | 3.51e-01 | 70.9% | 15.5% |
| 4143595 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.73 | 59.0 | 4.98e-01 | 90.9% | 70.5% |
| 4046955 | 531.2.1.1 ↗ | alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › FliG_M | 0.71 | 51.0 | 4.30e-01 | 81.8% | 45.3% |
| 3964187 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.70 | 48.0 | 4.17e-01 | 81.8% | 48.8% |
| 3240002 | 3371.1.1.1 ↗ | few secondary structure elements › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › RPAP2_Rtr1 | 0.70 | 56.0 | 4.34e-01 | 98.2% | 38.5% |
| 3971758 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.69 | 47.0 | 4.00e-01 | 81.8% | 45.9% |
| 3682134 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 58.0 | 5.70e-01 | 98.2% | 100.0% |
| 4429233 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.68 | 53.0 | 4.70e-01 | 89.1% | 78.8% |
| 3994572 | 3371.1.1.1 ↗ | few secondary structure elements › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › RPAP2_Rtr1 | 0.67 | 58.0 | 4.57e-01 | 100.0% | 52.5% |
| 3796324 | 3371.1.1.1 ↗ | few secondary structure elements › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › RPAP2_Rtr1 | 0.67 | 53.0 | 3.94e-01 | 98.2% | 32.3% |
| 3619662 | 192.12.1.3 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › DUF747 | 0.67 | 47.0 | 4.19e-01 | 74.5% | 56.2% |
| 4383676 | 3922.1.1.67 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Val_tRNA-synt_C | 0.67 | 47.0 | 4.36e-01 | 74.5% | 61.4% |
| 4015596 | 3873.1.1.0 ↗ | a+b two layers › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain | 0.67 | 52.0 | 4.09e-01 | 87.3% | 42.5% |
| 4198477 | 3758.2.1.1 ↗ | alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB | 0.66 | 57.0 | 3.83e-01 | 98.2% | 83.6% |
| 3508614 | 601.1.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin | 0.66 | 56.0 | 4.10e-01 | 98.2% | 35.2% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.66 | 45.0 | 3.24e-01 | 70.9% | 22.9% |
| 3179675 | 3873.1.1.1 ↗ | a+b two layers › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › HGTP_anticodon2 | 0.65 | 50.0 | 3.98e-01 | 87.3% | 42.5% |
| 4982912 | 7014.1.1.0 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain | 0.65 | 58.0 | 4.92e-01 | 100.0% | 61.1% |
| 223256 | 109.1.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 | 0.65 | 53.0 | 4.12e-01 | 94.5% | 91.4% |
| 3699588 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 51.0 | 4.89e-01 | 98.2% | 82.9% |
| 3179519 | 101.1.2.381 ↗ | alpha arrays › HTH › HTH › winged helix domain › UBR1-like_wing | 0.63 | 52.0 | 4.10e-01 | 100.0% | 69.6% |
| 3584684 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.63 | 47.0 | 2.87e-01 | 81.8% | 37.1% |
| 4379330 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.63 | 52.0 | 5.07e-01 | 90.9% | 91.7% |
| 3279544 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.62 | 44.0 | 2.75e-01 | 76.4% | 13.9% |
| 3247158 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 49.0 | 4.58e-01 | 96.4% | 92.0% |
| 3892814 | 108.1.1.68 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › TPGS1_C | 0.61 | 48.0 | 3.45e-01 | 94.5% | 33.3% |
| 3605145 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.61 | 45.0 | 3.05e-01 | 85.5% | 43.6% |
| 4975222 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.61 | 46.0 | 3.21e-01 | 85.5% | 27.5% |
| 3909408 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.60 | 46.0 | 4.29e-01 | 90.9% | 93.3% |
| 3576327 | 6067.1.1.1 ↗ | alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer | 0.60 | 52.0 | 4.74e-01 | 100.0% | 100.0% |
| 4030049 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 4.16e-01 | 98.2% | 54.5% |
| 4635973 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.59 | 49.0 | 3.47e-01 | 98.2% | 43.6% |
| 4376896 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.59 | 51.0 | 3.48e-01 | 100.0% | 54.8% |
| 4167208 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.58 | 43.0 | 4.24e-01 | 83.6% | 86.7% |
| 4322551 | 604.23.1.0 ↗ | alpha bundles › Spectrin repeat-like › Sbi complement-binding domain › Sbi complement-binding domain | 0.58 | 43.0 | 4.35e-01 | 83.6% | 94.5% |
| 3413303 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.57 | 39.0 | 3.87e-01 | 72.7% | 83.3% |
| 3260290 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.57 | 48.0 | 3.32e-01 | 98.2% | 51.6% |
| 3414542 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.55 | 41.0 | 4.02e-01 | 80.0% | 90.0% |
| 3191641 | 101.33.1.0 ↗ | alpha arrays › HTH › Replication foci-targeting sequence C-terminal domain › Replication foci-targeting sequence C-terminal domain | 0.55 | 41.0 | 3.45e-01 | 85.5% | 73.3% |
| 3688900 | 7579.1.1.89 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase, BD-FAE | 0.53 | 46.0 | 2.64e-01 | 98.2% | 20.9% |