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KR052482.1__AKF13641.1__PHIN3_378__00378

Bact-Vir

KR052482.1__AKF13641.1__PHIN3_378__00378

Identity

Accession:
KR052482 ↗
Kingdom:
phage

Quality

79.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-70
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 4.84e-01 82.9% 84.9%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 4.19e-01 84.3% 52.1%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 4.25e-01 84.3% 53.6%
3j7aY00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 3.93e-01 81.4% 74.7%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 4.68e-01 80.0% 90.5%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.31e-01 88.6% 56.0%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.82e-01 87.1% 88.9%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.83e-01 88.6% 76.8%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 4.69e-01 84.3% 87.8%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.25e-01 90.0% 59.1%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.09e-01 77.1% 62.0%
3qphA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.06e-01 72.9% 62.9%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.53e-01 81.4% 85.6%
2mc3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 4.88e-01 97.1% 94.2%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.53e-01 81.4% 85.7%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 4.53e-01 84.3% 87.0%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.42e-01 88.6% 68.2%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.42e-01 82.9% 75.3%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 4.48e-01 88.6% 75.0%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.82e-01 100.0% 83.8%
4bpe700 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 50.0 4.50e-01 92.9% 83.2%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.75e-01 77.1% 60.7%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 47.0 4.48e-01 88.6% 92.0%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.16e-01 82.9% 78.5%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 3.96e-01 94.3% 65.2%
2j0nB00 1.20.1710.10 Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like 0.57 42.0 3.16e-01 80.0% 88.2%
2fclA00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.57 40.0 3.16e-01 74.3% 76.3%
1xdsB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 3.94e-01 82.9% 63.0%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 4.27e-01 88.6% 98.8%
1go4A00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.56 41.0 3.06e-01 85.7% 28.6%
6nifA01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.56 40.0 2.97e-01 84.3% 27.0%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 4.08e-01 85.7% 98.8%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 4.12e-01 92.9% 92.2%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.53 39.0 3.66e-01 81.4% 69.9%
2x49A02 3.40.5.40 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › FHIPEP family, domain 2 0.53 33.0 3.61e-01 74.3% 87.5%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 3.99e-01 98.6% 91.7%
3qthB00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.50 36.0 2.90e-01 80.0% 84.8%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4989093 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 53.0 5.22e-01 80.0% 100.0%
3169955 101.1.2.284 alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd 0.69 55.0 4.89e-01 87.1% 75.0%
5044182 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 4.98e-01 82.9% 82.4%
4126575 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.68 53.0 4.20e-01 84.3% 52.4%
5034713 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 4.67e-01 82.9% 78.0%
4961452 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.68 59.0 4.94e-01 100.0% 92.0%
4961224 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.68 48.0 4.84e-01 74.3% 87.1%
5056233 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 53.0 4.87e-01 84.3% 87.8%
3603258 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.67 51.0 3.96e-01 81.4% 45.8%
5055105 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 5.04e-01 82.9% 80.0%
4983405 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 52.0 3.98e-01 84.3% 50.9%
4959343 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.67 52.0 4.81e-01 84.3% 98.9%
4977549 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.67 47.0 4.78e-01 74.3% 87.1%
3922802 101.1.2.506 alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.67 56.0 4.77e-01 95.7% 95.0%
4941358 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 55.0 5.26e-01 90.0% 93.8%
4030126 101.1.2.18 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e 0.67 50.0 3.88e-01 81.4% 71.9%
5029662 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 51.0 4.54e-01 82.9% 74.0%
4955128 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 51.0 4.08e-01 84.3% 56.2%
4970461 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.66 53.0 5.22e-01 88.6% 98.7%
3587362 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.66 51.0 4.08e-01 84.3% 54.7%
4940737 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 49.0 3.60e-01 81.4% 31.8%
3400082 101.1.2.109 alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.66 53.0 4.79e-01 91.4% 92.0%
4990274 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 48.0 4.29e-01 81.4% 73.3%
3269517 101.1.2.183 alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH 0.65 52.0 4.56e-01 88.6% 91.4%
5017584 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 49.0 4.49e-01 82.9% 78.9%
4968601 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 50.0 4.35e-01 82.9% 99.0%
4949735 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.64 49.0 4.65e-01 84.3% 82.4%
5030252 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 49.0 4.38e-01 82.9% 83.0%
4951774 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 54.0 4.60e-01 94.3% 75.7%
4973217 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 48.0 4.60e-01 82.9% 91.8%
4985757 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.64 52.0 4.66e-01 90.0% 90.0%
4959083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 51.0 3.89e-01 88.6% 44.7%
5039585 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.64 51.0 4.76e-01 90.0% 91.1%
4986295 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.64 48.0 4.07e-01 81.4% 65.8%
5051189 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 55.0 4.64e-01 100.0% 88.0%
4950303 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.63 51.0 4.48e-01 88.6% 100.0%
5035263 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.63 49.0 4.31e-01 84.3% 76.2%
4939406 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 50.0 3.81e-01 88.6% 43.4%
5027292 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 55.0 3.99e-01 100.0% 39.0%
3285369 109.4.1.2998 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF25872 0.63 54.0 3.34e-01 100.0% 29.5%
5040338 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.63 46.0 4.49e-01 80.0% 90.0%
4956478 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 45.0 4.66e-01 77.1% 100.0%
4941847 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.63 51.0 4.67e-01 91.4% 81.1%
5003982 101.1.2.275 alpha arrays › HTH › HTH › winged helix domain › DUF1495 0.63 47.0 4.18e-01 84.3% 78.2%
4995459 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 46.0 3.89e-01 78.6% 66.7%
4954867 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 47.0 4.61e-01 81.4% 93.3%
5017954 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 45.0 4.59e-01 78.6% 90.0%
4947228 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 4.75e-01 97.1% 99.0%
5038557 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.62 47.0 4.27e-01 84.3% 80.0%
5025624 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.62 50.0 4.91e-01 94.3% 98.8%
4968330 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 47.0 4.09e-01 84.3% 85.2%
5026584 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.62 51.0 4.63e-01 91.4% 98.9%
3239997 4156.1.1.2 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C 0.62 45.0 3.32e-01 80.0% 32.4%
3942666 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.62 47.0 4.30e-01 84.3% 81.6%
3958566 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.62 43.0 4.04e-01 74.3% 80.0%
4955611 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 49.0 4.42e-01 91.4% 89.4%
5054757 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 4.05e-01 87.1% 78.9%
5041922 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.61 51.0 4.94e-01 94.3% 97.5%
3281567 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.61 52.0 4.40e-01 100.0% 80.8%
3281207 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.61 46.0 4.33e-01 84.3% 94.4%
5033726 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.61 51.0 4.56e-01 94.3% 84.0%
4946906 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 4.37e-01 90.0% 91.0%
5022894 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 46.0 4.19e-01 82.9% 85.3%
4976901 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 4.44e-01 88.6% 90.0%
4927156 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 45.0 4.08e-01 82.9% 84.0%
4250998 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.60 44.0 4.03e-01 80.0% 93.7%
5069901 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 4.38e-01 88.6% 86.7%
4973726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 4.08e-01 90.0% 77.4%
5060133 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 39.0 3.66e-01 70.0% 71.1%
5061454 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.58 41.0 3.21e-01 74.3% 81.8%
4948120 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 45.0 4.25e-01 88.6% 97.8%
4999183 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 46.0 4.23e-01 90.0% 89.5%
3711774 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 45.0 4.00e-01 85.7% 92.4%
4971049 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.57 48.0 4.71e-01 100.0% 98.8%
4339648 101.1.2.852 alpha arrays › HTH › HTH › winged helix domain › PF27213 0.57 42.0 3.89e-01 81.4% 83.2%
3831895 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.56 44.0 3.01e-01 87.1% 32.7%
3371034 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 46.0 3.54e-01 92.9% 52.4%
5035255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 43.0 4.00e-01 87.1% 85.3%
3224303 101.1.2.113 alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 0.56 45.0 3.84e-01 91.4% 95.8%
4968841 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 35.0 2.26e-01 87.1% 13.5%
5021801 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 4.26e-01 88.6% 98.7%
3742582 859.1.1.1 a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.52 40.0 2.93e-01 85.7% 44.2%
4156356 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.50 36.0 3.38e-01 77.1% 80.0%
4973641 102.1.2.1 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD 0.50 37.0 2.75e-01 81.4% 38.1%
3174527 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.50 41.0 3.58e-01 95.7% 72.2%
D2 medium residues 71-122
PDB