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KR053194.1__AKJ72061.1__GAL1_46__00046
Bact-VirKR053194.1__AKJ72061.1__GAL1_46__00046
Identity
- Accession:
- KR053194 ↗
- Kingdom:
- phage
Quality
86.0
mean pLDDT
Taxonomy
TaxID: 1647469
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-53
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.63 | 44.0 | 3.26e-01 | 73.5% | 87.4% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.62 | 52.0 | 4.28e-01 | 100.0% | 53.1% |
| 6fgjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 41.0 | 3.01e-01 | 73.5% | 86.7% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 41.0 | 2.87e-01 | 73.5% | 88.3% |
| 4nzjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 43.0 | 3.57e-01 | 79.6% | 79.1% |
| 8enbA01 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.58 | 39.0 | 3.43e-01 | 73.5% | 88.0% |
| 1iamA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 3.58e-01 | 79.6% | 86.7% |
| 4ak1A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 3.42e-01 | 79.6% | 86.8% |
| 3ksrA01 | 6.20.370.100 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.56 | 34.0 | 3.34e-01 | 85.7% | 96.0% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 46.0 | 3.70e-01 | 100.0% | 46.6% |
| 2hsiA01 | 2.60.40.1590 | Mainly Beta › Sandwich › Immunoglobulin-like › Peptidoglycan hydrolase domains | 0.55 | 38.0 | 3.33e-01 | 77.6% | 89.0% |
| 3k0yA02 | 2.60.40.2370 | Mainly Beta › Sandwich › Immunoglobulin-like › NigD-like, C-terminal beta sandwich domain | 0.54 | 39.0 | 2.95e-01 | 81.6% | 75.2% |
| 1u8zA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 38.0 | 2.77e-01 | 77.6% | 28.5% |
| 3fn9C04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.28e-01 | 81.6% | 77.2% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.53 | 42.0 | 3.48e-01 | 93.9% | 100.0% |
| 1l0qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.35e-01 | 83.7% | 75.6% |
| 4mb4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.37e-01 | 79.6% | 81.0% |
| 1n2bB02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.53 | 36.0 | 2.99e-01 | 75.5% | 67.3% |
| 7jrmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.40e-01 | 79.6% | 87.8% |
| 4oo1I01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 38.0 | 3.35e-01 | 79.6% | 72.0% |
| 4pkcC00 | 6.20.90.20 | Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit | 0.52 | 35.0 | 3.64e-01 | 91.8% | 85.4% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 39.0 | 2.46e-01 | 87.8% | 37.8% |
| 3regA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 35.0 | 2.52e-01 | 75.5% | 29.2% |
| 2bmjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 35.0 | 2.59e-01 | 79.6% | 27.0% |
| 1d5cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 35.0 | 2.52e-01 | 75.5% | 31.5% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.50 | 42.0 | 3.08e-01 | 98.0% | 47.6% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4936660 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.67 | 59.0 | 5.69e-01 | 100.0% | 87.3% |
| 5049527 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.67 | 56.0 | 5.28e-01 | 93.9% | 90.0% |
| 3589192 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.66 | 49.0 | 4.17e-01 | 79.6% | 67.5% |
| 1746358 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 49.0 | 3.91e-01 | 83.7% | 70.4% |
| 3693225 | 3167.1.1.0 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) | 0.66 | 51.0 | 4.75e-01 | 89.8% | 87.7% |
| 4961820 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 52.0 | 4.90e-01 | 91.8% | 76.7% |
| 3506341 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.64 | 43.0 | 3.72e-01 | 71.4% | 83.7% |
| 5006040 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 42.0 | 3.36e-01 | 71.4% | 92.0% |
| 3742027 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.61 | 47.0 | 3.50e-01 | 89.8% | 41.4% |
| 4998648 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.61 | 50.0 | 4.18e-01 | 98.0% | 100.0% |
| 5051696 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.61 | 47.0 | 4.68e-01 | 95.9% | 87.3% |
| 3266048 | 213.1.1.26 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_4 | 0.61 | 51.0 | 3.53e-01 | 100.0% | 57.8% |
| 3248699 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.61 | 47.0 | 3.78e-01 | 91.8% | 56.4% |
| 3491344 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 37.0 | 3.10e-01 | 91.8% | 34.5% |
| 3775460 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 38.0 | 2.86e-01 | 71.4% | 25.4% |
| 184816 | 376.1.3.11 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 | 0.58 | 40.0 | 3.53e-01 | 93.9% | 46.8% |
| 4951376 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.57 | 39.0 | 3.39e-01 | 71.4% | 90.0% |
| 5007926 | 210.1.2.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase | 0.57 | 42.0 | 2.33e-01 | 79.6% | 48.1% |
| 3325240 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.57 | 39.0 | 2.74e-01 | 73.5% | 73.4% |
| 3798829 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 47.0 | 3.02e-01 | 93.9% | 39.1% |
| 3401676 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.56 | 43.0 | 3.03e-01 | 87.8% | 84.1% |
| 3701183 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.56 | 39.0 | 2.64e-01 | 77.6% | 22.2% |
| 3249479 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 3.38e-01 | 77.6% | 85.9% |
| 2883145 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.55 | 44.0 | 3.47e-01 | 93.9% | 54.2% |
| 4965857 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.55 | 47.0 | 4.27e-01 | 100.0% | 75.4% |
| 3255418 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.55 | 45.0 | 2.67e-01 | 93.9% | 65.5% |
| 4538250 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 40.0 | 2.97e-01 | 79.6% | 34.8% |
| 3535354 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.54 | 41.0 | 2.93e-01 | 87.8% | 86.7% |
| 3596855 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.53 | 40.0 | 3.03e-01 | 89.8% | 34.5% |
| 3825435 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.53 | 35.0 | 2.48e-01 | 87.8% | 19.4% |
| 3454564 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 37.0 | 3.31e-01 | 73.5% | 71.4% |
| 3383391 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 46.0 | 3.85e-01 | 100.0% | 79.5% |
| None | — | 0.53 | 40.0 | 3.16e-01 | 89.8% | 88.8% | |
| 3769484 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.53 | 33.0 | 2.83e-01 | 85.7% | 28.7% |
| 3291254 | 2004.1.1.286 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TraG-D_C | 0.53 | 45.0 | 2.55e-01 | 93.9% | 74.3% |
| 1815422 | 566.1.1.3 ↗ | alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related › Pneumo_ncap | 0.52 | 40.0 | 2.84e-01 | 100.0% | 39.6% |
| 3843825 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.52 | 43.0 | 3.00e-01 | 91.8% | 90.6% |
| 3573641 | 384.1.1.8 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › BPTI_nem | 0.52 | 37.0 | 3.38e-01 | 83.7% | 72.7% |
| 4429397 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.52 | 38.0 | 2.85e-01 | 91.8% | 78.2% |
| 3284417 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 38.0 | 3.09e-01 | 91.8% | 89.6% |
| 2726885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 2.96e-01 | 79.6% | 93.8% |
| 3438090 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.51 | 37.0 | 2.72e-01 | 89.8% | 32.4% |
| 3337634 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.51 | 42.0 | 3.04e-01 | 100.0% | 48.1% |
| 4029392 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.51 | 38.0 | 2.68e-01 | 85.7% | 38.4% |
| 3346721 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.51 | 41.0 | 3.20e-01 | 100.0% | 64.6% |
| 5070692 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.03e-01 | 79.6% | 89.5% |
| 3827584 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.50 | 40.0 | 2.86e-01 | 100.0% | 49.7% |