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KR053196.1__AKJ72217.1__TPA4_52__00052

Bact-Vir

KR053196.1__AKJ72217.1__TPA4_52__00052

Identity

Accession:
KR053196 ↗
Kingdom:
phage

Quality

70.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 50-120
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.80 61.0 4.93e-01 80.3% 65.6%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.73 59.0 5.28e-01 85.9% 96.9%
1b04A03 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 52.0 5.48e-01 74.6% 100.0%
3rx6A00 1.20.58.1090 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer 0.72 50.0 3.70e-01 73.2% 85.6%
2l81A00 1.20.120.830 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain 0.64 50.0 3.82e-01 85.9% 59.1%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 52.0 4.43e-01 90.1% 93.3%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.60 42.0 3.64e-01 71.8% 50.0%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.59 42.0 3.73e-01 73.2% 60.4%
2xvtC00 1.10.150.510 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family 0.57 44.0 4.30e-01 85.9% 96.2%
1iqpA03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.53 36.0 3.35e-01 71.8% 78.7%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4069906 604.12.1.108 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › CRPA 0.74 58.0 4.91e-01 85.9% 70.8%
3606098 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 44.0 3.69e-01 81.7% 100.0%