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KR053196.1__AKJ72246.1__TPA4_81__00081
Bact-VirKR053196.1__AKJ72246.1__TPA4_81__00081
Identity
- Accession:
- KR053196 ↗
- Kingdom:
- phage
Quality
72.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-59
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b6dB00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.77 | 51.0 | 4.83e-01 | 100.0% | 57.9% |
| 3j7aZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.62 | 47.0 | 4.27e-01 | 91.5% | 59.7% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.61 | 49.0 | 3.99e-01 | 100.0% | 45.8% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.59 | 43.0 | 3.03e-01 | 78.7% | 76.9% |
| 3pufL00 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 32.0 | 2.40e-01 | 78.7% | 21.6% |
| 3pquA01 | 2.40.128.250 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 38.0 | 2.89e-01 | 76.6% | 44.5% |
| 1eqnB01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.54 | 39.0 | 2.92e-01 | 80.9% | 69.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3232578 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.82 | 55.0 | 5.40e-01 | 100.0% | 66.0% |
| 5069246 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.81 | 53.0 | 5.24e-01 | 100.0% | 64.0% |
| 4936660 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.66 | 53.0 | 5.00e-01 | 100.0% | 74.5% |
| 4833007 | 3167.1.1.1 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e | 0.62 | 46.0 | 4.00e-01 | 91.5% | 48.9% |
| 3200614 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.59 | 39.0 | 2.91e-01 | 100.0% | 24.2% |
| 3644046 | 4120.1.1.0 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP | 0.58 | 36.0 | 3.29e-01 | 95.7% | 38.5% |
| 3683316 | 109.4.1.2506 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, PPR_long, TPR_24 | 0.57 | 36.0 | 1.99e-01 | 80.9% | 3.2% |
| 5078474 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.52 | 36.0 | 2.21e-01 | 72.3% | 45.2% |
| 5059758 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 36.0 | 3.01e-01 | 74.5% | 80.0% |