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KR053199.1__AKJ72289.1__GMA4_14__00015
Bact-VirKR053199.1__AKJ72289.1__GMA4_14__00015
Identity
- Accession:
- KR053199 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-89
Domain cluster:
rep: MF919510.1__ATN89561.1__SEA_KABLUNA_40__00041__D24-92
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.65 | 56.0 | 5.11e-01 | 100.0% | 79.2% |
| 1u7kA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.58 | 42.0 | 3.50e-01 | 78.6% | 75.6% |
| 4mo7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 47.0 | 3.79e-01 | 92.9% | 61.3% |
| 7craA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 40.0 | 3.71e-01 | 77.1% | 71.7% |
| 3dsqA01 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 38.0 | 3.96e-01 | 92.9% | 79.0% |
| 3rq4A01 | 1.10.10.1700 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Histone-lysine N-methyltransferase | 0.53 | 45.0 | 4.10e-01 | 100.0% | 84.7% |
| 8fwpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 36.0 | 2.60e-01 | 95.7% | 21.5% |
| 3r0vA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 42.0 | 2.96e-01 | 100.0% | 61.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928641 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.61 | 40.0 | 4.00e-01 | 100.0% | 64.0% |
| 3589744 | 3073.1.1.0 ↗ | alpha arrays › ORF12 from Lactococcus lactis phage p2 › ORF12 from Lactococcus lactis phage p2 › ORF12 from Lactococcus lactis phage p2 | 0.59 | 50.0 | 4.61e-01 | 100.0% | 98.9% |
| 3391020 | 6039.1.1.1 ↗ | few secondary structure elements › CLIP domain › CLIP domain › CLIP domain › CLIP | 0.58 | 35.0 | 3.87e-01 | 100.0% | 74.5% |
| 3393570 | 102.1.1.61 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › NCD1 | 0.53 | 44.0 | 4.11e-01 | 100.0% | 72.2% |