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KR053199.1__AKJ72321.1__GMA4_46__00046
Bact-VirKR053199.1__AKJ72321.1__GMA4_46__00046
Identity
- Accession:
- KR053199 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-56
Domain cluster:
representative
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wzoA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.86 | 62.0 | 6.84e-01 | 88.5% | 100.0% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.77 | 64.0 | 5.02e-01 | 96.2% | 43.4% |
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.75 | 66.0 | 5.05e-01 | 100.0% | 44.5% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 66.0 | 6.19e-01 | 98.1% | 84.1% |
| 1jb0E00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 60.0 | 5.53e-01 | 92.3% | 100.0% |
| 5hk0B00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 66.0 | 5.16e-01 | 100.0% | 79.4% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 59.0 | 6.17e-01 | 92.3% | 100.0% |
| 1ay9A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.72 | 61.0 | 4.83e-01 | 96.2% | 48.1% |
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 64.0 | 5.07e-01 | 100.0% | 52.9% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 57.0 | 5.26e-01 | 86.5% | 98.5% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 59.0 | 5.71e-01 | 98.1% | 90.0% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.71 | 59.0 | 5.74e-01 | 98.1% | 98.3% |
| 6uy8A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 53.0 | 5.18e-01 | 84.6% | 100.0% |
| 1jheA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.70 | 61.0 | 4.66e-01 | 100.0% | 44.4% |
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 58.0 | 5.69e-01 | 94.2% | 89.3% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 58.0 | 4.65e-01 | 96.2% | 58.3% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 52.0 | 4.70e-01 | 84.6% | 88.0% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 60.0 | 5.66e-01 | 100.0% | 93.7% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 56.0 | 4.92e-01 | 100.0% | 81.4% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 57.0 | 5.30e-01 | 96.2% | 98.5% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 57.0 | 5.19e-01 | 100.0% | 78.1% |
| 1zunB03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 59.0 | 4.70e-01 | 100.0% | 78.3% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 54.0 | 5.02e-01 | 96.2% | 94.3% |
| 1oqjA00 | 3.10.390.10 | Alpha Beta › Roll › SAND domain › SAND domain-like | 0.67 | 51.0 | 4.42e-01 | 88.5% | 82.2% |
| 1f60A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 57.0 | 4.57e-01 | 100.0% | 79.6% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 54.0 | 5.15e-01 | 96.2% | 81.2% |
| 1ljoA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 54.0 | 4.95e-01 | 100.0% | 93.3% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 49.0 | 5.03e-01 | 84.6% | 95.7% |
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.66 | 51.0 | 3.90e-01 | 92.3% | 63.1% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 57.0 | 4.50e-01 | 100.0% | 80.0% |
| 1s1nA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 49.0 | 4.75e-01 | 88.5% | 100.0% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 53.0 | 4.86e-01 | 100.0% | 90.7% |
| 1l8rA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.64 | 45.0 | 3.67e-01 | 75.0% | 86.1% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 53.0 | 4.96e-01 | 96.2% | 94.1% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.64 | 49.0 | 4.75e-01 | 88.5% | 84.7% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 56.0 | 4.50e-01 | 100.0% | 68.9% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 52.0 | 5.25e-01 | 94.2% | 94.3% |
| 4gzuB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 51.0 | 4.32e-01 | 92.3% | 89.0% |
| 1r5bA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 54.0 | 4.31e-01 | 100.0% | 77.3% |
| 2j7qA00 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.62 | 53.0 | 3.53e-01 | 100.0% | 32.9% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 54.0 | 4.53e-01 | 100.0% | 75.0% |
| 3mcaA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 53.0 | 4.35e-01 | 100.0% | 76.5% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 50.0 | 3.99e-01 | 100.0% | 47.2% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 54.0 | 4.45e-01 | 100.0% | 75.5% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 53.0 | 4.41e-01 | 100.0% | 76.6% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.61 | 51.0 | 4.12e-01 | 100.0% | 71.2% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 47.0 | 3.80e-01 | 96.2% | 68.5% |
| 1t0hA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 44.0 | 3.70e-01 | 82.7% | 66.7% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 48.0 | 4.09e-01 | 90.4% | 84.9% |
| 5trdA02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.59 | 50.0 | 3.80e-01 | 100.0% | 58.5% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 48.0 | 3.68e-01 | 100.0% | 37.2% |
| 2zzeA03 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 48.0 | 4.06e-01 | 100.0% | 74.5% |
| 1vclA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 45.0 | 3.52e-01 | 92.3% | 99.3% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.56 | 43.0 | 3.99e-01 | 88.5% | 100.0% |
| 7mhwA01 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 46.0 | 3.94e-01 | 96.2% | 97.8% |
| 2yvlA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.55 | 45.0 | 4.42e-01 | 96.2% | 96.6% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 45.0 | 3.93e-01 | 98.1% | 93.3% |
| 2zbvC02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.55 | 43.0 | 3.63e-01 | 94.2% | 91.2% |
| 1smpI00 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 44.0 | 3.71e-01 | 98.1% | 93.0% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.54 | 42.0 | 3.75e-01 | 100.0% | 91.0% |
| 8e7cA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 41.0 | 3.63e-01 | 88.5% | 66.7% |
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.53 | 37.0 | 3.12e-01 | 80.8% | 83.0% |
| 3mz1B02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 41.0 | 3.26e-01 | 86.5% | 98.1% |
| 2ynaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 36.0 | 3.18e-01 | 76.9% | 87.5% |
| 4oifA02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 36.0 | 2.51e-01 | 78.8% | 35.5% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 40.0 | 3.07e-01 | 98.1% | 82.0% |
| 3u9sE04 | 3.30.700.40 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.51 | 43.0 | 3.29e-01 | 98.1% | 77.6% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2772566 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.80 | 67.0 | 5.18e-01 | 96.2% | 43.0% |
| 4369736 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.78 | 62.0 | 6.53e-01 | 94.2% | 100.0% |
| 4525683 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.76 | 63.0 | 4.91e-01 | 96.2% | 41.5% |
| 3617111 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 68.0 | 5.67e-01 | 100.0% | 60.0% |
| 3942297 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.76 | 64.0 | 5.00e-01 | 98.1% | 44.2% |
| 3622055 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 67.0 | 5.72e-01 | 100.0% | 62.4% |
| 4957350 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 64.0 | 6.01e-01 | 100.0% | 84.6% |
| 4534931 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.75 | 64.0 | 5.68e-01 | 96.2% | 66.7% |
| 3333322 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.75 | 65.0 | 4.74e-01 | 96.2% | 37.8% |
| 3315100 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 65.0 | 6.09e-01 | 98.1% | 80.0% |
| 4607208 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.75 | 64.0 | 4.90e-01 | 98.1% | 41.5% |
| 3976863 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.74 | 62.0 | 5.03e-01 | 98.1% | 47.6% |
| 4318415 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.74 | 58.0 | 4.79e-01 | 86.5% | 85.3% |
| 3824699 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.74 | 64.0 | 5.98e-01 | 96.2% | 93.8% |
| 3911241 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 66.0 | 5.32e-01 | 100.0% | 53.0% |
| 4147290 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.74 | 64.0 | 5.99e-01 | 98.1% | 80.0% |
| 3231177 | 4.1.1.333 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29330 | 0.74 | 62.0 | 6.33e-01 | 92.3% | 98.0% |
| 3592540 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 65.0 | 6.22e-01 | 98.1% | 90.0% |
| 3408556 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 66.0 | 5.13e-01 | 100.0% | 49.1% |
| 3989485 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.73 | 60.0 | 6.11e-01 | 92.3% | 100.0% |
| 3308604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.73 | 62.0 | 5.61e-01 | 100.0% | 81.3% |
| 3914746 | 4.1.1.128 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_4 | 0.73 | 64.0 | 5.78e-01 | 98.1% | 75.7% |
| 4422251 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.73 | 63.0 | 6.42e-01 | 96.2% | 100.0% |
| 3936469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 63.0 | 5.31e-01 | 100.0% | 62.2% |
| 3399412 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 64.0 | 5.55e-01 | 100.0% | 65.0% |
| 3393297 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 64.0 | 5.54e-01 | 100.0% | 67.5% |
| 3389311 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 64.0 | 5.15e-01 | 100.0% | 54.0% |
| 3304602 | 4.1.1.427 ↗ | beta barrels › SH3 › SH3 › SH3 › F-box | 0.72 | 63.0 | 5.16e-01 | 98.1% | 53.7% |
| 4342488 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 61.0 | 5.80e-01 | 100.0% | 92.1% |
| 3465976 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 62.0 | 5.81e-01 | 98.1% | 80.0% |
| 3828348 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 61.0 | 5.69e-01 | 96.2% | 78.5% |
| 3463181 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 63.0 | 5.75e-01 | 100.0% | 77.1% |
| 3707347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 62.0 | 6.10e-01 | 98.1% | 94.5% |
| 4447540 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.71 | 61.0 | 4.48e-01 | 98.1% | 37.2% |
| 3500542 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 64.0 | 5.29e-01 | 100.0% | 63.3% |
| 3612184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 61.0 | 5.89e-01 | 98.1% | 86.7% |
| 3359784 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.71 | 61.0 | 5.69e-01 | 98.1% | 80.0% |
| 3340900 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 61.0 | 5.73e-01 | 100.0% | 81.5% |
| 4385345 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.70 | 59.0 | 5.99e-01 | 96.2% | 100.0% |
| 3561707 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 62.0 | 4.99e-01 | 100.0% | 53.0% |
| 3326132 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 59.0 | 5.50e-01 | 96.2% | 76.9% |
| 4280256 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.70 | 55.0 | 5.64e-01 | 100.0% | 98.0% |
| 3998645 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.69 | 54.0 | 5.05e-01 | 86.5% | 89.2% |
| 4954284 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 58.0 | 5.63e-01 | 98.1% | 96.7% |
| 4985100 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 56.0 | 5.76e-01 | 94.2% | 98.0% |
| 2561577 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.69 | 59.0 | 5.66e-01 | 98.1% | 85.2% |
| 4429179 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.69 | 52.0 | 5.46e-01 | 90.4% | 100.0% |
| 4305196 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.69 | 55.0 | 5.61e-01 | 98.1% | 98.0% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.69 | 59.0 | 4.70e-01 | 100.0% | 50.5% |
| 3993250 | 4.1.1.333 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29330 | 0.68 | 59.0 | 5.83e-01 | 98.1% | 92.7% |
| 4139090 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.68 | 55.0 | 5.43e-01 | 94.2% | 92.7% |
| 5029405 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.68 | 54.0 | 5.38e-01 | 94.2% | 94.5% |
| 5064457 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.68 | 54.0 | 5.05e-01 | 94.2% | 70.0% |
| 4953223 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.68 | 55.0 | 5.58e-01 | 94.2% | 96.0% |
| 4151014 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 56.0 | 5.41e-01 | 100.0% | 95.0% |
| 4957377 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.67 | 54.0 | 5.15e-01 | 94.2% | 77.8% |
| 4640515 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.67 | 56.0 | 5.70e-01 | 100.0% | 100.0% |
| 3996278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 55.0 | 4.34e-01 | 98.1% | 63.3% |
| 3498145 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 51.0 | 4.86e-01 | 86.5% | 93.8% |
| 4029082 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 53.0 | 5.44e-01 | 96.2% | 98.0% |
| 3778124 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 50.0 | 4.70e-01 | 84.6% | 87.7% |
| 5036621 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 54.0 | 5.37e-01 | 98.1% | 96.4% |
| 3482202 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 56.0 | 5.59e-01 | 100.0% | 100.0% |
| 478 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 54.0 | 4.95e-01 | 100.0% | 93.3% |
| 4951012 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.66 | 53.0 | 5.37e-01 | 96.2% | 98.0% |
| 3928362 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.66 | 58.0 | 4.71e-01 | 100.0% | 72.4% |
| 3270538 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.65 | 58.0 | 4.35e-01 | 100.0% | 71.2% |
| 3219717 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.65 | 57.0 | 4.80e-01 | 100.0% | 76.7% |
| 4932427 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.65 | 58.0 | 4.81e-01 | 100.0% | 75.6% |
| 3270372 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.65 | 57.0 | 4.43e-01 | 100.0% | 73.9% |
| 3636050 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.64 | 57.0 | 4.40e-01 | 100.0% | 62.6% |
| 3476488 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.64 | 56.0 | 4.45e-01 | 100.0% | 79.1% |
| 5001596 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.64 | 56.0 | 4.72e-01 | 100.0% | 77.8% |
| 3698630 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.64 | 56.0 | 4.48e-01 | 100.0% | 70.5% |
| 4668791 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.64 | 56.0 | 4.49e-01 | 100.0% | 60.0% |
| 3187986 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.64 | 55.0 | 4.44e-01 | 100.0% | 64.8% |
| 3782293 | 4.1.1.170 ↗ | beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind | 0.64 | 48.0 | 4.82e-01 | 92.3% | 83.6% |
| 4961202 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.63 | 56.0 | 4.68e-01 | 100.0% | 74.4% |
| 5074592 | 1.1.8.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › aSelB_III | 0.63 | 56.0 | 4.41e-01 | 100.0% | 69.1% |
| 3585142 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.63 | 55.0 | 4.24e-01 | 100.0% | 59.2% |
| 4990285 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.63 | 55.0 | 4.66e-01 | 100.0% | 74.2% |
| 5016579 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.63 | 56.0 | 4.86e-01 | 100.0% | 74.7% |
| 3599398 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.63 | 55.0 | 4.47e-01 | 100.0% | 69.0% |
| 3779830 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.63 | 50.0 | 4.39e-01 | 98.1% | 66.7% |
| 4514948 | 1.1.8.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB | 0.62 | 54.0 | 4.48e-01 | 100.0% | 69.5% |
| 3597995 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.62 | 54.0 | 4.28e-01 | 100.0% | 60.9% |
| 3393006 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.62 | 54.0 | 4.21e-01 | 100.0% | 61.7% |
| 5020442 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.62 | 53.0 | 4.43e-01 | 100.0% | 74.7% |
| 3602123 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.61 | 53.0 | 4.70e-01 | 100.0% | 76.9% |
| 4944212 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 53.0 | 4.53e-01 | 100.0% | 76.1% |
| 3559120 | 220.1.1.173 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK | 0.59 | 46.0 | 3.66e-01 | 92.3% | 87.5% |
| 4891197 | 3794.1.1.7 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › Biotin_lipoyl | 0.54 | 42.0 | 3.51e-01 | 98.1% | 92.9% |
| 5079674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.53 | 45.0 | 4.07e-01 | 100.0% | 72.0% |
D2
high
residues 82-156
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.71 | 53.0 | 4.63e-01 | 80.0% | 53.6% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 46.0 | 4.65e-01 | 76.0% | 72.7% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.63 | 52.0 | 4.04e-01 | 88.0% | 77.4% |
| 2qgaB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.58 | 45.0 | 4.03e-01 | 89.3% | 65.8% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4570960 | 605.1.1.137 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › RRP36 | 0.83 | 77.0 | 5.85e-01 | 100.0% | 46.9% |
| 3617130 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.79 | 61.0 | 5.55e-01 | 80.0% | 63.2% |
| 4323650 | 2004.1.1.45 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V | 0.75 | 66.0 | 4.28e-01 | 96.0% | 23.0% |
| 3309008 | 375.1.1.246 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rad50_zn_hook | 0.75 | 57.0 | 5.05e-01 | 80.0% | 71.4% |
| 3282651 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.73 | 63.0 | 3.69e-01 | 90.7% | 13.3% |
| 2968365 | 3605.1.1.0 ↗ | alpha bundles › Polarity suppression protein › Polarity suppression protein › Polarity suppression protein | 0.67 | 61.0 | 4.16e-01 | 97.3% | 96.6% |
| 4541653 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.66 | 57.0 | 5.22e-01 | 92.0% | 80.0% |
| 4821042 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.66 | 44.0 | 3.91e-01 | 74.7% | 47.3% |
| 3240453 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 48.0 | 4.34e-01 | 80.0% | 58.0% |
| 4946898 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.64 | 42.0 | 4.25e-01 | 86.7% | 66.7% |
| 4428645 | 3826.1.1.80 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › GrpE | 0.55 | 40.0 | 4.29e-01 | 82.7% | 100.0% |