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KR063279.1__AKL88216.1__GMA3_39__00039

Bact-Vir

KR063279.1__AKL88216.1__GMA3_39__00039

Identity

Accession:
KR063279 ↗
Kingdom:
phage

Quality

87.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Gamtrevirus› Gordonia_phage_GMA3

TaxID: 1647284

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 36-128
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.46e-01 100.0% 79.5%
2knaA01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.58 29.0 3.73e-01 88.2% 83.3%
2n5hA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.58 28.0 2.91e-01 78.5% 46.7%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 27.0 3.10e-01 80.6% 69.7%
6a95A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.50 39.0 3.58e-01 84.9% 68.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589151 829.1.1.2 ↗ a+b duplicates or obligate multimers › NinB › NinB › NinB › HNHc_6 0.56 41.0 3.77e-01 78.5% 58.4%
3982291 101.1.11.7 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › RelB 0.54 36.0 3.92e-01 90.3% 81.0%
3654733 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.53 38.0 3.89e-01 88.2% 78.9%
3303348 102.1.1.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC 0.51 35.0 3.54e-01 71.0% 72.6%