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KR063279.1__AKL88217.1__GMA3_40__00040

Bact-Vir

KR063279.1__AKL88217.1__GMA3_40__00040

Identity

Accession:
KR063279 ↗
Kingdom:
phage

Quality

94.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Gamtrevirus› Gordonia_phage_GMA3

TaxID: 1647284

Cluster

View cluster (25 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-98
PDB
Domain cluster: rep: NC_048751.1__YP_009843702.1__HWC07_gp021__00021__D19-110
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24043.2 best DUF7352 81.1 7.80e-23 100.0% 90.8%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dpnA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 37.0 2.74e-01 91.5% 23.4%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 4.00e-01 89.4% 93.2%
2wcrB00 3.10.129.140 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein 0.50 35.0 3.00e-01 71.3% 96.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044384 306.3.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.77 43.0 4.57e-01 90.4% 61.2%
3813594 222.1.1.8 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 0.56 40.0 3.52e-01 73.4% 81.4%
3267677 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 3.85e-01 100.0% 82.5%
3896294 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.52 38.0 3.79e-01 100.0% 74.7%