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KR063280.1__AKL88337.1__GMA6_56__00056
Bact-VirKR063280.1__AKL88337.1__GMA6_56__00056
Identity
- Accession:
- KR063280 ↗
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Taxonomy
TaxID: 1647285
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-48
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3dA03 | 1.10.579.10 | Mainly Alpha › Orthogonal Bundle › DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3 › DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 | 0.70 | 58.0 | 3.91e-01 | 100.0% | 24.7% |
| 3t69A02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.70 | 58.0 | 3.74e-01 | 100.0% | 20.8% |
| 2o57A01 | 1.10.287.840 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mycolic acid cyclopropane synthase domain like | 0.69 | 48.0 | 3.72e-01 | 75.6% | 57.1% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.66 | 55.0 | 4.83e-01 | 100.0% | 71.2% |
| 1szhA02 | 1.10.150.370 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Caenorhabditis elegans Her-1, C-terminal domain | 0.64 | 51.0 | 4.37e-01 | 95.6% | 53.7% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.62 | 50.0 | 3.98e-01 | 91.1% | 57.6% |
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 41.0 | 3.54e-01 | 75.6% | 79.5% |
| 2el7B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 44.0 | 2.97e-01 | 95.6% | 36.8% |
| 4eadA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.56 | 48.0 | 3.70e-01 | 100.0% | 54.2% |
| 5mmiJ02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.55 | 42.0 | 3.89e-01 | 100.0% | 97.1% |
| 3u4qB04 | 6.10.140.1030 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 43.0 | 3.85e-01 | 95.6% | 66.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4967525 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.75 | 63.0 | 3.85e-01 | 100.0% | 20.0% |
| 3202292 | 101.38.1.3 ↗ | alpha arrays › HTH › DNA-binding domain of the replication initiator protein ColE2-Rep › DNA-binding domain of the replication initiator protein ColE2-Rep › DUF6891 | 0.69 | 55.0 | 4.97e-01 | 100.0% | 75.7% |
| 3700029 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 58.0 | 4.74e-01 | 100.0% | 52.9% |
| 3669 | 633.16.1.1 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like › MLD | 0.64 | 53.0 | 4.27e-01 | 100.0% | 61.2% |
| 3806070 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.63 | 54.0 | 5.24e-01 | 100.0% | 98.0% |
| 3785170 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 51.0 | 4.85e-01 | 100.0% | 87.3% |