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KR072689.1__AKG94540.1__Shpa_29__00029
Bact-VirKR072689.1__AKG94540.1__Shpa_29__00029
Identity
- Accession:
- KR072689 ↗
- Kingdom:
- phage
Quality
63.7
mean pLDDT
Taxonomy
TaxID: 1647282
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-68
D2
high
residues 91-183
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.69 | 41.0 | 4.52e-01 | 100.0% | 71.8% |
| 2p12A01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.57 | 50.0 | 4.20e-01 | 100.0% | 56.5% |
| 1oaoC01 | 1.10.8.190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 | 0.53 | 40.0 | 3.67e-01 | 87.1% | 61.7% |
| 4ie5A02 | 1.20.58.1470 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FTO C-terminal domain | 0.52 | 42.0 | 3.79e-01 | 89.2% | 81.3% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 38.0 | 3.76e-01 | 78.5% | 85.1% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 35.0 | 3.63e-01 | 100.0% | 77.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3389963 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.66 | 38.0 | 4.37e-01 | 100.0% | 77.1% |
| 4136405 | 3978.1.1.1 ↗ | alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › FA_desaturase | 0.59 | 52.0 | 3.69e-01 | 100.0% | 56.7% |
| 3958099 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 35.0 | 2.64e-01 | 71.0% | 41.6% |
| 3694293 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.51 | 35.0 | 2.80e-01 | 71.0% | 88.0% |