←Back to structures
KR072689.1__AKG94552.1__Shpa_41__00041
Bact-VirKR072689.1__AKG94552.1__Shpa_41__00041
Identity
- Accession:
- KR072689 ↗
- Kingdom:
- phage
Quality
79.2
mean pLDDT
Taxonomy
TaxID: 1647282
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-61
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bd1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 71.0 | 6.90e-01 | 100.0% | 89.2% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 58.0 | 5.62e-01 | 83.1% | 87.7% |
| 1ic8A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 57.0 | 4.92e-01 | 88.1% | 63.8% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 63.0 | 6.07e-01 | 100.0% | 92.6% |
| 2hinA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 60.0 | 5.80e-01 | 96.6% | 84.8% |
| 2xcjA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 57.0 | 5.21e-01 | 98.3% | 76.2% |
| 2ebyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 57.0 | 5.27e-01 | 100.0% | 84.8% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 57.0 | 5.61e-01 | 100.0% | 96.8% |
| 2fjrA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 53.0 | 4.93e-01 | 96.6% | 84.2% |
| 3kjxD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 44.0 | 4.44e-01 | 74.6% | 75.4% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 54.0 | 5.10e-01 | 98.3% | 80.3% |
| 1vpwA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 42.0 | 4.26e-01 | 71.2% | 77.2% |
| 2nyvA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 48.0 | 4.69e-01 | 88.1% | 96.9% |
| 1qd1B02 | 3.30.70.670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain | 0.59 | 51.0 | 3.88e-01 | 100.0% | 57.2% |
| 2ltuA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.58 | 45.0 | 4.49e-01 | 89.8% | 83.9% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 43.0 | 4.22e-01 | 86.4% | 97.0% |
| 1bg6A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 44.0 | 3.43e-01 | 91.5% | 48.6% |
| 5je8B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 40.0 | 3.16e-01 | 84.7% | 78.1% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 4.26e-01 | 93.2% | 89.3% |
| 3juiA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 39.0 | 2.93e-01 | 86.4% | 65.5% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 38.0 | 3.44e-01 | 88.1% | 68.1% |
| 2z1qB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 41.0 | 3.32e-01 | 98.3% | 86.0% |
| 5ekdA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.51 | 37.0 | 3.08e-01 | 79.7% | 46.8% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943710 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.84 | 73.0 | 7.10e-01 | 94.9% | 100.0% |
| 5037780 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.81 | 72.0 | 6.52e-01 | 100.0% | 86.3% |
| 4114937 | 101.1.4.5 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HNF-1_N | 0.74 | 59.0 | 4.77e-01 | 88.1% | 53.0% |
| 3982350 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.73 | 65.0 | 6.14e-01 | 100.0% | 95.7% |
| 4940455 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.73 | 58.0 | 4.44e-01 | 88.1% | 42.2% |
| 3602378 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.73 | 53.0 | 5.20e-01 | 79.7% | 84.6% |
| 4977170 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.72 | 61.0 | 5.58e-01 | 100.0% | 86.9% |
| 2389360 | 101.1.4.24 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › YdaS_toxin | 0.72 | 61.0 | 5.99e-01 | 98.3% | 87.7% |
| 3958941 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.72 | 55.0 | 5.06e-01 | 86.4% | 77.5% |
| 3164312 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.71 | 62.0 | 5.65e-01 | 100.0% | 77.5% |
| 164935 | 101.1.4.21 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › P22_Cro | 0.71 | 60.0 | 5.80e-01 | 96.6% | 84.8% |
| 4933148 | 101.1.4.96 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PolC_DP2_central | 0.70 | 60.0 | 5.34e-01 | 100.0% | 68.9% |
| 3699551 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 60.0 | 5.47e-01 | 98.3% | 92.5% |
| 3605903 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.70 | 59.0 | 5.30e-01 | 96.6% | 84.7% |
| 3589834 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.70 | 54.0 | 5.26e-01 | 86.4% | 86.2% |
| 5015485 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.69 | 53.0 | 5.24e-01 | 88.1% | 86.2% |
| 3947329 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.67 | 56.0 | 5.52e-01 | 100.0% | 96.9% |
| 5007716 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.67 | 50.0 | 4.79e-01 | 84.7% | 78.6% |
| 4032484 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.66 | 48.0 | 4.85e-01 | 81.4% | 88.3% |
| 3587532 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.66 | 52.0 | 5.32e-01 | 88.1% | 100.0% |
| 3588628 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.65 | 52.0 | 5.23e-01 | 89.8% | 100.0% |
| 5028456 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.64 | 53.0 | 4.82e-01 | 93.2% | 68.8% |
| 3290493 | 141.1.1.2 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › SQS_PSY | 0.64 | 51.0 | 3.32e-01 | 94.9% | 29.5% |
| 3222360 | 103.1.1.21 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID | 0.64 | 44.0 | 4.93e-01 | 74.6% | 100.0% |
| 3301544 | 1106.1.1.1 ↗ | alpha arrays › RDS3 complex subunit 10 › RDS3 complex subunit 10 › RDS3 complex subunit 10 › SF3b10 | 0.63 | 42.0 | 3.91e-01 | 100.0% | 54.7% |
| 3953342 | 101.1.4.61 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF27182 | 0.63 | 46.0 | 3.71e-01 | 84.7% | 77.8% |
| 4611605 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.62 | 37.0 | 4.10e-01 | 89.8% | 77.8% |
| 3605193 | 1106.1.1.1 ↗ | alpha arrays › RDS3 complex subunit 10 › RDS3 complex subunit 10 › RDS3 complex subunit 10 › SF3b10 | 0.61 | 41.0 | 3.84e-01 | 100.0% | 54.7% |
| 5048699 | 374.1.1.0 ↗ | few secondary structure elements › HIPIP (high potential iron protein) › HIPIP (high potential iron protein) › HIPIP (high potential iron protein) | 0.60 | 41.0 | 3.71e-01 | 71.2% | 49.4% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.55 | 41.0 | 3.80e-01 | 89.8% | 62.7% |
| 3619451 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 41.0 | 3.95e-01 | 81.4% | 73.8% |
| 4520564 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.51 | 39.0 | 3.58e-01 | 86.4% | 73.8% |