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KR080195.1__AKF14416.1__SEA_PHAYONCE_56__00056

Bact-Vir

KR080195.1__AKF14416.1__SEA_PHAYONCE_56__00056

Identity

Accession:
KR080195 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Phayoncevirus› Mycobacterium_phage_Phayonce

TaxID: 1647302

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-102
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 48.0 5.84e-01 70.3% 100.0%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 47.0 5.75e-01 72.3% 100.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 48.0 5.65e-01 72.3% 98.6%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 5.02e-01 79.2% 81.5%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 47.0 5.33e-01 73.3% 97.3%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.66 45.0 4.52e-01 70.3% 82.7%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 45.0 5.08e-01 84.2% 96.0%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 43.0 4.95e-01 70.3% 97.1%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.72e-01 80.2% 71.8%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.59 41.0 3.76e-01 71.3% 69.7%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 41.0 2.65e-01 78.2% 90.6%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 38.0 2.88e-01 75.2% 46.9%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 36.0 3.35e-01 70.3% 87.7%
4owzA00 3.10.130.10 Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain 0.51 35.0 3.24e-01 71.3% 97.0%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 37.0 3.18e-01 76.2% 86.1%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4524363 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.75 48.0 5.90e-01 70.3% 100.0%
4946993 4.1.1.479 ↗ beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.74 50.0 5.91e-01 73.3% 100.0%
4931072 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.73 49.0 5.80e-01 73.3% 100.0%
3483489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 48.0 5.49e-01 72.3% 92.0%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.72 48.0 5.31e-01 72.3% 86.3%
4997059 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.70 50.0 5.77e-01 74.3% 100.0%
3297966 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.70 49.0 4.63e-01 72.3% 86.7%
3821751 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.70 46.0 5.04e-01 71.3% 83.7%
3253266 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 51.0 5.03e-01 77.2% 81.9%
3998955 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 50.0 4.92e-01 77.2% 89.1%
145843 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.68 51.0 5.02e-01 79.2% 81.5%
3791752 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 42.0 5.23e-01 70.3% 100.0%
3557649 4.8.1.20 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N 0.66 48.0 4.81e-01 76.2% 86.7%
3342228 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.65 49.0 4.07e-01 78.2% 86.5%
3465486 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.65 49.0 4.00e-01 78.2% 87.4%
3650798 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 47.0 4.48e-01 77.2% 100.0%
3708407 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.61 43.0 4.69e-01 73.3% 100.0%
3394789 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 43.0 4.23e-01 73.3% 70.9%
3951961 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.61 45.0 4.65e-01 79.2% 83.2%
3399965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.85e-01 84.2% 90.0%
3881192 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 44.0 3.70e-01 78.2% 90.0%
2141160 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 39.0 3.94e-01 76.2% 68.3%
3414877 4.27.1.1 ↗ beta barrels › SH3 › Mitoribosomal protein mS34 › Mitoribosomal protein mS34 › MRP-S34 0.58 47.0 4.10e-01 87.1% 66.0%
3619212 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 39.0 2.77e-01 75.2% 44.8%
None — 0.52 39.0 2.77e-01 79.2% 46.1%
4419304 11.4.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › DUF4352 0.51 38.0 3.15e-01 78.2% 70.3%
D2 high residues 120-179
PDB
Domain cluster: rep: OP434460.1__UYL88100.1__SEA_PYTHEAS_72__00072__D132-187