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KR093628.1__AKI27132.1__X__00022
Bact-VirKR093628.1__AKI27132.1__X__00022
Identity
- Accession:
- KR093628 ↗
- Kingdom:
- phage
Quality
67.6
mean pLDDT
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-35_57-140
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.76 | 70.0 | 6.24e-01 | 100.0% | 89.3% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.75 | 66.0 | 5.80e-01 | 95.3% | 84.6% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.75 | 69.0 | 6.05e-01 | 100.0% | 80.8% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.74 | 68.0 | 5.92e-01 | 100.0% | 81.9% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 63.0 | 5.79e-01 | 100.0% | 93.4% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 57.0 | 5.77e-01 | 97.2% | 90.6% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.67 | 54.0 | 4.91e-01 | 100.0% | 63.9% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 54.0 | 5.31e-01 | 100.0% | 81.6% |
| 3bpkA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 61.0 | 5.07e-01 | 100.0% | 74.9% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.65 | 54.0 | 5.19e-01 | 100.0% | 77.9% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.65 | 48.0 | 4.93e-01 | 91.6% | 80.0% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.65 | 44.0 | 4.49e-01 | 88.8% | 72.1% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 58.0 | 5.22e-01 | 100.0% | 80.3% |
| 3f7eA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 58.0 | 5.45e-01 | 100.0% | 88.3% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 35.0 | 3.95e-01 | 72.0% | 71.1% |
| 1p97A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 44.0 | 4.35e-01 | 73.8% | 96.5% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 56.0 | 5.48e-01 | 100.0% | 94.9% |
| 4dj3B02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 46.0 | 4.07e-01 | 78.5% | 79.2% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 55.0 | 5.37e-01 | 100.0% | 94.1% |
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.60 | 44.0 | 4.47e-01 | 95.3% | 78.1% |
| 1a7sA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 45.0 | 4.57e-01 | 100.0% | 82.9% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 36.0 | 3.96e-01 | 80.4% | 75.0% |
| 1p38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 42.0 | 3.81e-01 | 98.1% | 56.0% |
| 1lfwA03 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 40.0 | 4.43e-01 | 86.0% | 87.5% |
| 1wa9A02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 43.0 | 3.74e-01 | 78.5% | 75.0% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 52.0 | 4.75e-01 | 100.0% | 88.7% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.58 | 52.0 | 4.17e-01 | 100.0% | 89.5% |
| 4uhvA01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.58 | 51.0 | 4.20e-01 | 98.1% | 70.3% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 36.0 | 4.00e-01 | 80.4% | 79.8% |
| 3h7tA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 43.0 | 4.31e-01 | 100.0% | 78.4% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 3.83e-01 | 86.0% | 83.7% |
| 3rtyB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 37.0 | 3.77e-01 | 71.0% | 100.0% |
| 4nasB01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.54 | 39.0 | 3.83e-01 | 73.8% | 73.5% |
| 7qh7701 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.54 | 47.0 | 3.92e-01 | 98.1% | 81.5% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.50 | 39.0 | 4.18e-01 | 100.0% | 95.7% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.85 | 80.0 | 6.76e-01 | 100.0% | 79.5% |
| 2674670 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.85 | 80.0 | 6.69e-01 | 100.0% | 75.0% |
| 5083300 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.84 | 79.0 | 7.07e-01 | 100.0% | 93.8% |
| 3967003 | 1.1.13.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_11 | 0.84 | 79.0 | 7.14e-01 | 100.0% | 94.3% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.83 | 78.0 | 6.65e-01 | 100.0% | 81.7% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 78.0 | 7.38e-01 | 100.0% | 100.0% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 79.0 | 7.30e-01 | 100.0% | 95.4% |
| 4344991 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.78 | 68.0 | 6.33e-01 | 99.1% | 76.2% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.77 | 71.0 | 6.32e-01 | 100.0% | 91.3% |
| 2101633 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.77 | 72.0 | 6.10e-01 | 100.0% | 75.4% |
| 4929587 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 61.0 | 6.63e-01 | 93.5% | 100.0% |
| 3942090 | 1.1.5.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube | 0.76 | 72.0 | 6.09e-01 | 100.0% | 78.2% |
| 3265120 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.76 | 71.0 | 5.94e-01 | 100.0% | 81.1% |
| 4929752 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.76 | 71.0 | 6.20e-01 | 100.0% | 82.6% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.76 | 61.0 | 5.83e-01 | 100.0% | 73.6% |
| 3970015 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.76 | 54.0 | 5.77e-01 | 99.1% | 84.0% |
| 5078836 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 71.0 | 7.10e-01 | 100.0% | 98.2% |
| 3976188 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.75 | 70.0 | 5.97e-01 | 100.0% | 77.6% |
| 184718 | 1.1.13.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_12 | 0.75 | 66.0 | 5.80e-01 | 95.3% | 84.6% |
| 3096576 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.75 | 69.0 | 5.98e-01 | 100.0% | 86.2% |
| 4988102 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.75 | 67.0 | 6.71e-01 | 95.3% | 98.2% |
| 3587074 | 1.1.13.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N | 0.74 | 68.0 | 6.80e-01 | 99.1% | 99.1% |
| 4319057 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.72 | 57.0 | 5.61e-01 | 100.0% | 78.3% |
| 4551243 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.71 | 57.0 | 5.46e-01 | 100.0% | 73.6% |
| 5007131 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.70 | 48.0 | 5.03e-01 | 89.7% | 77.9% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.70 | 57.0 | 5.42e-01 | 100.0% | 74.4% |
| 3696371 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.70 | 64.0 | 4.96e-01 | 100.0% | 62.3% |
| 4402697 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.70 | 58.0 | 5.57e-01 | 100.0% | 79.2% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.69 | 59.0 | 5.49e-01 | 100.0% | 74.4% |
| 4888819 | 1.1.13.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 | 0.69 | 60.0 | 5.97e-01 | 95.3% | 91.0% |
| 4562905 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.69 | 57.0 | 5.46e-01 | 100.0% | 76.8% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 59.0 | 6.01e-01 | 93.5% | 97.1% |
| 4217523 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.67 | 57.0 | 5.38e-01 | 100.0% | 77.6% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.67 | 58.0 | 5.74e-01 | 94.4% | 90.0% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.66 | 50.0 | 4.88e-01 | 93.5% | 71.7% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.66 | 51.0 | 5.56e-01 | 82.2% | 100.0% |
| 4096792 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.66 | 60.0 | 4.83e-01 | 100.0% | 68.3% |
| 3602499 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.66 | 61.0 | 5.69e-01 | 100.0% | 92.3% |
| 4995815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 60.0 | 5.73e-01 | 100.0% | 88.8% |
| 4538400 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 55.0 | 5.17e-01 | 100.0% | 74.6% |
| 4973221 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.66 | 60.0 | 5.54e-01 | 100.0% | 79.3% |
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.66 | 60.0 | 5.28e-01 | 100.0% | 77.4% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.65 | 56.0 | 5.78e-01 | 96.3% | 100.0% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.65 | 57.0 | 5.63e-01 | 96.3% | 99.1% |
| 3286417 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.64 | 58.0 | 5.55e-01 | 100.0% | 89.6% |
| 4964155 | 1.1.9.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA | 0.64 | 56.0 | 5.10e-01 | 96.3% | 77.9% |
| 3280029 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.64 | 58.0 | 5.35e-01 | 100.0% | 83.0% |
| 4616814 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.63 | 48.0 | 4.95e-01 | 89.7% | 86.0% |
| 3369437 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.63 | 54.0 | 4.12e-01 | 94.4% | 75.2% |
| 3286515 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.62 | 56.0 | 5.17e-01 | 100.0% | 85.0% |
| 4968263 | 1.1.5.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C | 0.62 | 56.0 | 4.43e-01 | 100.0% | 63.2% |
| 4214302 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.62 | 53.0 | 4.21e-01 | 93.5% | 76.8% |
| 3909822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 53.0 | 5.26e-01 | 91.6% | 91.8% |
| 3535347 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 53.0 | 5.20e-01 | 93.5% | 89.6% |
| 3801974 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.61 | 43.0 | 4.28e-01 | 72.9% | 96.4% |
| 3187986 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.60 | 41.0 | 4.19e-01 | 78.5% | 71.4% |
| 3533150 | 11.1.1.1108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERB_head | 0.60 | 43.0 | 4.57e-01 | 90.7% | 86.3% |
| 2099294 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.58 | 52.0 | 4.75e-01 | 100.0% | 88.7% |
| 3660221 | 60.1.1.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain | 0.56 | 50.0 | 4.39e-01 | 100.0% | 77.2% |
| 3518863 | 221.1.2.16 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › MTRES1_C | 0.55 | 38.0 | 3.90e-01 | 71.0% | 100.0% |
| 3251895 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 36.0 | 3.82e-01 | 87.9% | 73.7% |
| 4449990 | 60.1.1.12 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Treslin_M | 0.55 | 48.0 | 4.36e-01 | 100.0% | 77.3% |
| 3546177 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.54 | 43.0 | 3.40e-01 | 100.0% | 39.1% |
| 4959692 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.54 | 38.0 | 3.42e-01 | 72.0% | 75.9% |
| 3993477 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 37.0 | 3.00e-01 | 72.9% | 63.5% |