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KR093631.1__AKI27332.1__X__00041

Bact-Vir

KR093631.1__AKI27332.1__X__00041

Identity

Accession:
KR093631 ↗
Kingdom:
phage

Quality

59.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-119
PDB
D2 high residues 131-210
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 49.0 5.57e-01 73.8% 91.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 49.0 5.28e-01 78.8% 83.3%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 49.0 5.36e-01 78.8% 86.2%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 5.61e-01 78.8% 93.5%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.71 54.0 4.35e-01 81.2% 46.4%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.70 52.0 4.77e-01 78.8% 64.4%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 48.0 4.05e-01 71.2% 78.9%
3nppA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.69 52.0 5.05e-01 80.0% 93.1%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 47.0 3.99e-01 72.5% 87.8%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 47.0 3.97e-01 71.2% 84.6%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 52.0 4.39e-01 82.5% 54.9%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 46.0 4.12e-01 72.5% 94.5%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 5.08e-01 72.5% 93.5%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 45.0 4.05e-01 71.2% 91.7%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 4.46e-01 90.0% 92.5%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.63 45.0 4.14e-01 76.2% 94.5%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.63 45.0 3.29e-01 75.0% 95.3%
4c47A01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.63 44.0 3.81e-01 72.5% 89.3%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 44.0 3.81e-01 72.5% 87.7%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 44.0 2.92e-01 72.5% 37.0%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.62 51.0 3.74e-01 88.7% 98.6%
4mjdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 43.0 3.82e-01 71.2% 90.3%
4hfsA00 2.60.120.1270 Mainly Beta › Sandwich › Jelly Rolls › 0.62 47.0 3.51e-01 81.2% 72.9%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 42.0 3.71e-01 71.2% 88.3%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.61 46.0 4.20e-01 81.2% 62.4%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 42.0 3.81e-01 71.2% 98.1%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.42e-01 78.8% 78.3%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 42.0 2.87e-01 72.5% 37.8%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 40.0 2.77e-01 72.5% 35.3%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 47.0 3.01e-01 90.0% 82.8%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.57 40.0 2.74e-01 72.5% 34.3%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 46.0 3.09e-01 91.3% 90.2%
2uvaG08 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 38.0 2.61e-01 70.0% 58.0%
4g59B00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.54 38.0 3.06e-01 73.8% 98.8%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.54 41.0 3.55e-01 85.0% 79.6%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.54 40.0 3.53e-01 78.8% 68.1%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 44.0 3.79e-01 97.5% 91.0%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.53 36.0 2.79e-01 71.2% 33.5%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5043697 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 55.0 6.03e-01 75.0% 84.6%
3947700 4.8.1.25 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB 0.78 57.0 6.29e-01 76.2% 100.0%
4422252 4.1.1.455 beta barrels › SH3 › SH3 › SH3 › DSRB 0.77 54.0 6.08e-01 72.5% 100.0%
4161673 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.76 52.0 5.13e-01 77.5% 67.1%
3855038 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.75 51.0 4.00e-01 76.2% 35.0%
2727964 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.74 50.0 5.73e-01 76.2% 94.9%
3791777 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.74 57.0 5.56e-01 80.0% 92.9%
3166879 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 55.0 6.02e-01 77.5% 100.0%
3395150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 53.0 5.90e-01 78.8% 100.0%
4537528 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 54.0 5.79e-01 77.5% 100.0%
3737837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 53.0 5.78e-01 75.0% 100.0%
3886139 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 54.0 5.97e-01 80.0% 96.9%
3917372 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.73 51.0 5.28e-01 80.0% 77.3%
3848399 4.8.1.24 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.73 55.0 5.86e-01 82.5% 91.4%
4523548 4.8.1.35 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 0.72 49.0 4.81e-01 70.0% 78.8%
4793345 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.71 52.0 4.69e-01 77.5% 97.2%
3401387 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.70 62.0 4.82e-01 100.0% 67.8%
608 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.70 52.0 4.77e-01 78.8% 64.4%
3786518 4.8.1.18 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N 0.69 49.0 5.40e-01 73.8% 96.9%
3721062 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.68 50.0 4.91e-01 76.2% 87.1%
4961804 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.38e-01 82.5% 100.0%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 45.0 5.17e-01 72.5% 94.8%
3888395 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.68 50.0 5.00e-01 78.8% 96.4%
3630385 9.1.1.49 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 0.68 48.0 4.22e-01 73.8% 93.9%
3636503 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 53.0 5.61e-01 82.5% 97.1%
3060391 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.68 49.0 4.34e-01 76.2% 94.8%
3389662 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.67 49.0 4.99e-01 77.5% 83.7%
3197566 4.1.1.89 beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.67 49.0 4.60e-01 78.8% 93.0%
3519884 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.67 58.0 5.36e-01 95.0% 89.0%
3254881 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 48.0 4.97e-01 77.5% 96.0%
3768116 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.66 58.0 4.25e-01 97.5% 47.4%
3065351 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.66 48.0 4.16e-01 78.8% 94.5%
5032809 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.65 52.0 4.38e-01 86.3% 52.3%
3961612 881.1.1.8 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C 0.65 44.0 3.30e-01 71.2% 61.3%
3603190 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 44.0 2.58e-01 71.2% 12.3%
4505316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 46.0 5.07e-01 82.5% 100.0%
5075469 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.64 48.0 5.20e-01 83.7% 98.5%
3237464 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.64 45.0 2.96e-01 72.5% 33.3%
3228872 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.63 44.0 2.88e-01 72.5% 30.1%
858 9.3.1.1 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Qn_am_d_aII 0.63 45.0 4.02e-01 76.2% 86.6%
3218924 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.63 44.0 2.87e-01 72.5% 31.2%
3238384 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.62 43.0 3.23e-01 72.5% 54.4%
4003008 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.61 42.0 2.88e-01 72.5% 35.5%
3699353 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.60 42.0 2.79e-01 72.5% 31.1%
3486144 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.60 42.0 2.81e-01 72.5% 36.2%
3502237 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.60 42.0 2.79e-01 72.5% 40.0%
3492822 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.58 41.0 2.70e-01 72.5% 34.3%
None 0.58 40.0 2.73e-01 72.5% 33.1%
3476730 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.57 40.0 2.68e-01 72.5% 35.3%
3937102 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.57 40.0 3.07e-01 72.5% 47.2%
5027711 222.1.1.1 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.57 39.0 3.30e-01 70.0% 96.4%
None 0.56 39.0 2.70e-01 72.5% 35.1%
3690300 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.56 38.0 3.03e-01 71.2% 81.7%
5037370 4200.1.1.0 beta barrels › YmcC-like › YmcC-like › YmcC-like 0.56 45.0 3.73e-01 87.5% 100.0%
3352272 331.9.1.2 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.54 40.0 3.57e-01 78.8% 69.6%
3805804 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.54 37.0 3.69e-01 72.5% 90.6%
3241811 4026.1.1.1 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.54 44.0 3.59e-01 93.8% 66.7%
3644755 5084.5.1.23 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD 0.54 37.0 2.52e-01 72.5% 67.0%
3717146 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 43.0 2.67e-01 88.7% 88.2%
3351533 5084.5.1.23 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD 0.52 36.0 2.44e-01 72.5% 54.0%
5016827 5090.1.1.11 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S_layer_N 0.51 40.0 3.51e-01 83.7% 70.6%
3615185 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 45.0 2.86e-01 97.5% 39.2%
3980178 7503.1.1.13 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › Lipoprotein_16 0.51 35.0 2.86e-01 73.8% 88.2%