←Back to structures

KR093632.1__AKI27367.1__X__00029

Bact-Vir

KR093632.1__AKI27367.1__X__00029

Identity

Accession:
KR093632 ↗
Kingdom:
phage

Quality

75.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Moraxella_phage_Mcat8

TaxID: 1647554

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-47
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.78 67.0 4.95e-01 100.0% 37.9%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.72 60.0 4.34e-01 100.0% 32.6%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 4.97e-01 100.0% 74.6%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 49.0 3.01e-01 91.3% 30.4%
3qr8A01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.63 48.0 4.05e-01 87.0% 82.1%
4agiA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.61 46.0 2.85e-01 89.1% 100.0%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.60 51.0 3.72e-01 97.8% 45.9%
3auxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 52.0 3.10e-01 100.0% 13.8%
4qt6A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.58 50.0 3.46e-01 100.0% 72.3%
2fp8B00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 44.0 2.81e-01 97.8% 25.4%
2gumB01 2.30.30.1230 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 3.64e-01 95.7% 56.0%
4ym3C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.48e-01 100.0% 77.9%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.39e-01 100.0% 89.1%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.55 41.0 3.37e-01 82.6% 42.2%
2vy0B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 2.93e-01 100.0% 38.0%
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.55 40.0 3.68e-01 91.3% 81.1%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 42.0 3.04e-01 95.7% 40.5%
6kcvA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 2.99e-01 100.0% 67.1%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 43.0 3.89e-01 100.0% 80.8%
4e9kA00 2.60.120.1350 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 0.54 42.0 2.77e-01 95.7% 36.3%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 42.0 3.35e-01 100.0% 94.9%
3ab1B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 40.0 2.77e-01 93.5% 83.5%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 43.0 2.76e-01 100.0% 43.7%
3hbkA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 42.0 2.80e-01 100.0% 35.1%
2jj6A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.31e-01 100.0% 85.8%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 41.0 2.63e-01 100.0% 33.3%
2o5nA02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.52 38.0 2.78e-01 87.0% 81.5%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 2.90e-01 100.0% 66.8%
1k8iA01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.52 36.0 3.22e-01 82.6% 46.8%
6krwA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 36.0 2.36e-01 84.8% 17.2%
1uaiA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 2.77e-01 100.0% 43.9%
3mcaB01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.51 41.0 3.40e-01 100.0% 53.1%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 38.0 3.16e-01 100.0% 96.5%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 42.0 2.85e-01 100.0% 64.8%
3immA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.50 39.0 2.74e-01 100.0% 73.1%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5055984 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.78 64.0 4.62e-01 100.0% 31.9%
4256943 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.75 62.0 4.49e-01 100.0% 32.1%
3575262 206.1.1.72 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal 0.73 61.0 3.68e-01 97.8% 33.6%
3741277 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.73 61.0 3.65e-01 97.8% 24.3%
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.71 60.0 5.19e-01 100.0% 64.0%
4014906 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 57.0 4.78e-01 91.3% 53.8%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.71 60.0 5.18e-01 100.0% 64.0%
2512682 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 51.0 4.88e-01 84.8% 72.7%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 54.0 5.32e-01 95.7% 90.0%
3801884 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.67 57.0 3.44e-01 100.0% 25.0%
3928050 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 54.0 3.97e-01 95.7% 95.6%
4024560 208.1.1.20 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep, GMPPB_C 0.66 48.0 3.24e-01 78.3% 45.7%
3841524 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 54.0 4.25e-01 100.0% 49.1%
4028871 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.65 49.0 4.34e-01 87.0% 82.2%
3247995 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 55.0 4.89e-01 100.0% 68.6%
3229426 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.64 50.0 3.11e-01 89.1% 26.4%
3873942 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 4.90e-01 97.8% 87.7%
3463214 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.64 53.0 3.31e-01 100.0% 25.0%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.64 54.0 3.54e-01 100.0% 30.0%
3224981 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 53.0 4.94e-01 100.0% 90.0%
3600486 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 54.0 4.25e-01 100.0% 56.0%
4399684 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.62 52.0 4.08e-01 100.0% 84.8%
3294867 3459.1.1.3 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.61 50.0 4.09e-01 100.0% 91.6%
3626422 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 40.0 2.78e-01 71.7% 38.0%
5009130 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.58 51.0 3.04e-01 100.0% 13.9%
4400687 2004.1.1.782 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23, AAA_29, SbcC_Walker_B 0.58 51.0 2.94e-01 100.0% 10.9%
3335113 5.3.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.57 39.0 3.22e-01 73.9% 41.1%
5018044 5.1.3.20 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 0.57 45.0 2.75e-01 97.8% 22.1%
3588108 4325.1.1.7 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 0.55 38.0 3.74e-01 71.7% 84.0%
3235525 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.55 41.0 2.90e-01 100.0% 22.0%
3895174 206.1.1.76 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1, Pkinase_fungal 0.55 42.0 2.69e-01 100.0% 31.6%
3461499 3459.1.1.3 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.54 44.0 3.42e-01 100.0% 97.5%
4359442 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.51 43.0 2.89e-01 100.0% 62.0%
4176722 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.50 40.0 3.30e-01 100.0% 79.0%
3798957 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 40.0 3.05e-01 100.0% 85.9%