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KR093632.1__AKI27372.1__X__00034
Bact-VirKR093632.1__AKI27372.1__X__00034
Identity
- Accession:
- KR093632 ↗
- Kingdom:
- phage
Quality
83.3
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-66
Domain cluster:
rep: OQ059336.1__WBF05265.1__X__00003__D4-47
D2
high
residues 70-125
Domain cluster:
rep: OQ059336.1__WBF05265.1__X__00003__D57-111
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cf6E01 | 1.10.8.1240 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 38.0 | 4.12e-01 | 82.1% | 64.4% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.67 | 48.0 | 4.27e-01 | 100.0% | 52.4% |
| 5gz8A00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.64 | 50.0 | 3.28e-01 | 89.3% | 57.0% |
| 3fy6A01 | 3.30.2210.10 | Alpha Beta › 2-Layer Sandwich › Integron cassette protein fold › Integron cassette protein superfamily | 0.64 | 53.0 | 4.42e-01 | 98.2% | 98.1% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 50.0 | 4.45e-01 | 92.9% | 79.8% |
| 3h0dB02 | 1.10.1200.150 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain | 0.59 | 50.0 | 4.51e-01 | 100.0% | 84.0% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.57 | 48.0 | 4.59e-01 | 94.6% | 83.6% |
| 2ex3B02 | 1.20.1270.230 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › DNA terminal protein Gp3, priming domain | 0.55 | 42.0 | 3.82e-01 | 87.5% | 59.3% |
| 3m1mA03 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.54 | 47.0 | 3.84e-01 | 100.0% | 99.1% |
| 1v9mA03 | 1.20.1690.10 | Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain | 0.53 | 45.0 | 3.90e-01 | 100.0% | 88.5% |
| 1lb3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 43.0 | 3.13e-01 | 94.6% | 56.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028692 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.65 | 49.0 | 2.89e-01 | 80.4% | 10.8% |
| 4453525 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.64 | 51.0 | 4.92e-01 | 87.5% | 80.0% |
| 5005257 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.63 | 43.0 | 3.14e-01 | 100.0% | 24.1% |
| 4973692 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.63 | 44.0 | 3.66e-01 | 75.0% | 42.0% |
| 3879800 | 601.3.1.8 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › IQUB | 0.62 | 52.0 | 3.99e-01 | 100.0% | 49.3% |
| 3165359 | 105.1.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain | 0.60 | 51.0 | 4.32e-01 | 100.0% | 66.0% |
| 3285206 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.59 | 40.0 | 3.54e-01 | 71.4% | 95.3% |
| 3396357 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.57 | 47.0 | 4.11e-01 | 94.6% | 65.6% |
| 3703252 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 48.0 | 3.97e-01 | 94.6% | 90.0% |
| 3530765 | 192.29.1.203 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › IQUB | 0.56 | 48.0 | 3.90e-01 | 100.0% | 54.8% |
| 4309144 | 110.1.1.12 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › RECK-like_N | 0.56 | 40.0 | 4.06e-01 | 75.0% | 98.2% |
| 3902412 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.56 | 42.0 | 3.80e-01 | 82.1% | 83.7% |
| 3670862 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.55 | 41.0 | 2.59e-01 | 96.4% | 14.8% |
| 3407582 | 102.1.1.173 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF27983 | 0.54 | 40.0 | 3.45e-01 | 94.6% | 50.0% |
| 4983854 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 43.0 | 2.91e-01 | 96.4% | 23.3% |