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KR093645.1__AKI27900.1__X__00033
Bact-VirKR093645.1__AKI27900.1__X__00033
Identity
- Accession:
- KR093645 ↗
- Kingdom:
- phage
Quality
91.5
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 258-369
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00319__D987-1069
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00595.30 best | PDZ | 35.3 | 1.70e-08 | 78.6% | 97.5% |
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fc6A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.94 | 74.0 | 8.22e-01 | 87.5% | 98.9% |
| 4c2dA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.94 | 76.0 | 8.31e-01 | 92.9% | 100.0% |
| 2gzvA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.87 | 57.0 | 6.48e-01 | 73.2% | 86.0% |
| 3o46A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.87 | 57.0 | 6.55e-01 | 72.3% | 88.1% |
| 1y8tA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.87 | 66.0 | 7.45e-01 | 88.4% | 100.0% |
| 3ggeB00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.86 | 58.0 | 6.41e-01 | 74.1% | 83.7% |
| 2dazA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.85 | 58.0 | 5.81e-01 | 74.1% | 69.6% |
| 1wifA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.84 | 55.0 | 6.21e-01 | 74.1% | 87.1% |
| 2dluA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 55.0 | 5.57e-01 | 74.1% | 67.6% |
| 1um1A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 57.0 | 5.82e-01 | 73.2% | 71.8% |
| 2iwoA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 56.0 | 6.23e-01 | 72.3% | 84.8% |
| 1qavA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 56.0 | 6.23e-01 | 74.1% | 85.6% |
| 2jilA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 56.0 | 6.10e-01 | 77.7% | 82.1% |
| 2qt5A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 55.0 | 5.88e-01 | 74.1% | 78.4% |
| 1ueqA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 56.0 | 5.47e-01 | 73.2% | 64.2% |
| 2yt7A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 56.0 | 6.30e-01 | 77.7% | 89.7% |
| 2r4hC01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 54.0 | 6.12e-01 | 75.0% | 86.4% |
| 2edpA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 53.0 | 6.04e-01 | 76.8% | 86.0% |
| 4xhvA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 57.0 | 6.23e-01 | 71.4% | 85.1% |
| 2e7kA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 52.0 | 5.79e-01 | 74.1% | 80.2% |
| 1ihjA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 58.0 | 6.31e-01 | 72.3% | 86.2% |
| 1wh1A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 54.0 | 6.00e-01 | 74.1% | 84.4% |
| 2dmzA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 56.0 | 6.14e-01 | 76.8% | 85.1% |
| 2v90C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 54.0 | 5.94e-01 | 74.1% | 82.8% |
| 3b76A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 56.0 | 5.94e-01 | 74.1% | 79.2% |
| 1ufxA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 57.0 | 6.00e-01 | 74.1% | 79.6% |
| 1nf3C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 57.0 | 5.51e-01 | 74.1% | 69.1% |
| 3k1rA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 51.0 | 5.18e-01 | 73.2% | 66.7% |
| 2f0aA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 54.0 | 5.98e-01 | 72.3% | 87.9% |
| 1p1dA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.77 | 52.0 | 5.71e-01 | 75.0% | 83.0% |
| 1te0A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.76 | 64.0 | 6.76e-01 | 97.3% | 98.0% |
| 1v62A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.76 | 55.0 | 5.45e-01 | 82.1% | 70.9% |
| 3r0hG01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.76 | 54.0 | 5.67e-01 | 73.2% | 80.2% |
| 1p1eA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.76 | 54.0 | 5.68e-01 | 78.6% | 81.2% |
| 1wi4A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.75 | 52.0 | 5.76e-01 | 77.7% | 88.8% |
| 2ejyA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.75 | 49.0 | 5.55e-01 | 73.2% | 87.1% |
| 1ujdA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 55.0 | 5.42e-01 | 75.9% | 72.6% |
| 1uhpA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.73 | 54.0 | 5.60e-01 | 78.6% | 80.4% |
| 1uewA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.71 | 51.0 | 5.15e-01 | 75.0% | 72.8% |
| 4nn5C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 40.0 | 4.55e-01 | 89.3% | 91.7% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 33.0 | 3.99e-01 | 83.0% | 87.5% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 28.0 | 3.60e-01 | 77.7% | 83.9% |
| 7solA02 | 3.10.290.60 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-activating enzyme E1, UFD domain | 0.56 | 40.0 | 4.13e-01 | 92.0% | 80.6% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 32.0 | 3.88e-01 | 87.5% | 88.9% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 4.09e-01 | 86.6% | 88.5% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 28.0 | 3.43e-01 | 88.4% | 92.1% |
| 1osyA00 | 2.60.40.1790 | Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve | 0.51 | 38.0 | 3.78e-01 | 94.6% | 77.2% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4577010 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.94 | 75.0 | 8.22e-01 | 90.2% | 96.8% |
| 1123877 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.93 | 73.0 | 8.17e-01 | 90.2% | 100.0% |
| 3319075 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.92 | 75.0 | 8.14e-01 | 90.2% | 97.9% |
| 4344951 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.91 | 73.0 | 7.95e-01 | 100.0% | 97.9% |
| 3808085 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 77.0 | 8.17e-01 | 96.4% | 100.0% |
| 3503861 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.89 | 59.0 | 6.03e-01 | 73.2% | 69.1% |
| 3457560 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.87 | 72.0 | 7.83e-01 | 87.5% | 100.0% |
| 3552306 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.87 | 56.0 | 5.70e-01 | 73.2% | 66.4% |
| 4195824 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.87 | 59.0 | 5.79e-01 | 74.1% | 65.0% |
| 3517644 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.87 | 58.0 | 5.37e-01 | 72.3% | 56.3% |
| 4001508 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.86 | 57.0 | 5.20e-01 | 74.1% | 53.6% |
| 3626063 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.86 | 58.0 | 5.70e-01 | 74.1% | 64.2% |
| 3800891 | 7.1.1.17 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ, PDZ_6 | 0.86 | 56.0 | 4.43e-01 | 74.1% | 35.2% |
| 3596413 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.86 | 63.0 | 7.07e-01 | 88.4% | 94.4% |
| 3374000 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.86 | 58.0 | 6.07e-01 | 73.2% | 74.3% |
| 3627061 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 58.0 | 5.81e-01 | 75.0% | 67.8% |
| 3574454 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 55.0 | 6.03e-01 | 73.2% | 77.9% |
| 3710124 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.85 | 64.0 | 7.14e-01 | 91.1% | 96.7% |
| 3414113 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 61.0 | 6.06e-01 | 73.2% | 73.9% |
| 3470274 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.85 | 57.0 | 5.88e-01 | 73.2% | 72.4% |
| 3561342 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 58.0 | 5.39e-01 | 74.1% | 57.8% |
| 3894979 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 57.0 | 5.34e-01 | 73.2% | 58.5% |
| 3393529 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 57.0 | 5.11e-01 | 74.1% | 51.3% |
| 3630523 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 57.0 | 6.33e-01 | 74.1% | 84.4% |
| 3875212 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 54.0 | 5.48e-01 | 73.2% | 65.5% |
| 3891640 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 56.0 | 5.62e-01 | 73.2% | 66.1% |
| 3880511 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.85 | 59.0 | 5.85e-01 | 74.1% | 68.7% |
| 2082644 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 57.0 | 6.32e-01 | 74.1% | 84.6% |
| 3789702 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.85 | 55.0 | 6.29e-01 | 74.1% | 87.1% |
| 3924448 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 58.0 | 5.70e-01 | 74.1% | 65.8% |
| 3923695 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.84 | 56.0 | 6.12e-01 | 77.7% | 80.0% |
| 3496216 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.84 | 59.0 | 6.27e-01 | 73.2% | 80.0% |
| 3503830 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.84 | 57.0 | 6.43e-01 | 74.1% | 86.7% |
| 3575402 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.84 | 56.0 | 5.26e-01 | 74.1% | 57.1% |
| 3856053 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.84 | 56.0 | 6.07e-01 | 74.1% | 80.0% |
| 3994761 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.83 | 58.0 | 5.69e-01 | 82.1% | 66.7% |
| 3551968 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.83 | 55.0 | 6.11e-01 | 73.2% | 83.3% |
| 3477726 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.83 | 60.0 | 4.68e-01 | 74.1% | 38.6% |
| 3482801 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.83 | 56.0 | 6.26e-01 | 71.4% | 85.6% |
| 3584786 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.83 | 54.0 | 5.78e-01 | 72.3% | 75.0% |
| 3800623 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.83 | 60.0 | 5.63e-01 | 74.1% | 65.4% |
| 3235208 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 57.0 | 5.92e-01 | 74.1% | 75.2% |
| 3491610 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 59.0 | 6.17e-01 | 74.1% | 79.0% |
| 4877104 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 66.0 | 6.84e-01 | 87.5% | 91.3% |
| 3800904 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 57.0 | 5.97e-01 | 73.2% | 76.9% |
| 4947927 | 7.1.1.32 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › Peptidase_M50 | 0.82 | 56.0 | 5.57e-01 | 77.7% | 67.8% |
| 715 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 56.0 | 5.47e-01 | 73.2% | 64.2% |
| 3501670 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 59.0 | 6.02e-01 | 74.1% | 77.3% |
| 3939562 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 56.0 | 5.03e-01 | 73.2% | 52.7% |
| 3437155 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.82 | 55.0 | 5.98e-01 | 72.3% | 81.1% |
| 3749582 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 57.0 | 5.69e-01 | 74.1% | 69.6% |
| 3315643 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 55.0 | 6.11e-01 | 72.3% | 85.6% |
| 3217139 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 56.0 | 5.72e-01 | 74.1% | 71.8% |
| 3936072 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 57.0 | 5.93e-01 | 72.3% | 76.2% |
| 3521804 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.82 | 56.0 | 5.32e-01 | 75.0% | 60.8% |
| 3530768 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 54.0 | 5.63e-01 | 73.2% | 72.4% |
| 3478585 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 57.0 | 6.18e-01 | 74.1% | 84.2% |
| 3926656 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 59.0 | 5.37e-01 | 75.0% | 59.3% |
| 3616958 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 58.0 | 5.22e-01 | 74.1% | 56.6% |
| 3996473 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 61.0 | 5.06e-01 | 77.7% | 77.2% |
| 3583842 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 56.0 | 4.73e-01 | 75.0% | 45.7% |
| 3497475 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.81 | 57.0 | 5.68e-01 | 74.1% | 70.4% |
| 3480356 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 56.0 | 5.74e-01 | 73.2% | 72.7% |
| 3622363 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.81 | 59.0 | 6.26e-01 | 75.0% | 85.0% |
| 3546131 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 58.0 | 6.03e-01 | 73.2% | 79.6% |
| 3476765 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 58.0 | 5.69e-01 | 74.1% | 71.7% |
| 4431665 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.81 | 56.0 | 5.96e-01 | 74.1% | 80.0% |
| 3528160 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.80 | 56.0 | 5.95e-01 | 71.4% | 81.0% |
| 3854708 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.80 | 56.0 | 5.18e-01 | 74.1% | 57.9% |
| 3897662 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.80 | 58.0 | 3.69e-01 | 74.1% | 17.8% |
| 3575638 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.79 | 55.0 | 5.69e-01 | 75.0% | 75.2% |
| 3866645 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.79 | 57.0 | 5.67e-01 | 75.0% | 71.3% |
| 3389048 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.79 | 56.0 | 6.23e-01 | 72.3% | 90.0% |
| 3480377 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.79 | 56.0 | 5.74e-01 | 73.2% | 74.5% |
| 3513294 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.79 | 59.0 | 6.11e-01 | 76.8% | 81.9% |
| 3499746 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.79 | 57.0 | 5.80e-01 | 74.1% | 83.6% |
| 3795114 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.79 | 55.0 | 5.59e-01 | 72.3% | 72.7% |
| 3910234 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.79 | 57.0 | 5.56e-01 | 74.1% | 69.2% |
| 3918667 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.78 | 56.0 | 5.84e-01 | 75.0% | 79.0% |
| 3481195 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.78 | 55.0 | 5.86e-01 | 73.2% | 81.0% |
| 3473590 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.78 | 57.0 | 5.15e-01 | 75.0% | 65.5% |
| 3543147 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.78 | 55.0 | 5.73e-01 | 73.2% | 78.1% |
| 3905516 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.77 | 57.0 | 5.53e-01 | 75.0% | 74.2% |
| 3398537 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.77 | 54.0 | 5.62e-01 | 73.2% | 77.1% |
| 3622908 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.77 | 50.0 | 5.46e-01 | 72.3% | 78.9% |
| 3223048 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.76 | 55.0 | 5.13e-01 | 75.0% | 61.5% |
| 3398531 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.76 | 54.0 | 5.47e-01 | 73.2% | 73.6% |
| 3574161 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.76 | 55.0 | 5.57e-01 | 75.0% | 76.1% |
| 3897064 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.74 | 59.0 | 5.90e-01 | 88.4% | 80.9% |
| 4349826 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.74 | 58.0 | 6.11e-01 | 81.2% | 93.0% |
| 3892053 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.73 | 53.0 | 5.28e-01 | 75.0% | 73.9% |
| 139481 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.70 | 58.0 | 5.85e-01 | 88.4% | 85.7% |
| 3461187 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.64 | 57.0 | 5.68e-01 | 96.4% | 97.4% |
D2
medium
residues 37-125_232-257
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17804.7 best | TSP_NTD | 71.1 | 2.10e-19 | 70.4% | 39.1% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2n00A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.64 | 46.0 | 4.94e-01 | 100.0% | 90.5% |
| 1rfzA00 | 1.10.3760.10 | Mainly Alpha › Orthogonal Bundle › YutG-like › PgpA-like | 0.58 | 43.0 | 3.84e-01 | 77.4% | 87.2% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 41.0 | 3.97e-01 | 92.2% | 65.9% |
| 2q14B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.57 | 45.0 | 3.67e-01 | 87.8% | 73.0% |
| 3dyjA02 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.56 | 38.0 | 3.54e-01 | 70.4% | 71.5% |
| 4mndA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.56 | 41.0 | 3.51e-01 | 77.4% | 85.9% |
| 5ojcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 47.0 | 4.26e-01 | 96.5% | 91.6% |
| 3d2eA06 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 36.0 | 3.65e-01 | 74.8% | 70.8% |
| 1hlbA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 44.0 | 4.10e-01 | 99.1% | 93.0% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.52 | 38.0 | 3.19e-01 | 75.7% | 70.5% |
| 4x28A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 36.0 | 3.25e-01 | 71.3% | 75.2% |
| 1fntc01 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.51 | 36.0 | 3.07e-01 | 72.2% | 74.5% |
| 3n5nX01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.51 | 40.0 | 3.94e-01 | 100.0% | 80.2% |
| 4gc0A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.50 | 36.0 | 2.88e-01 | 73.9% | 84.7% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.50 | 36.0 | 3.73e-01 | 74.8% | 100.0% |
| 3fnrA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.50 | 33.0 | 3.15e-01 | 91.3% | 53.8% |
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.50 | 43.0 | 4.02e-01 | 95.7% | 97.3% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.50 | 42.0 | 3.33e-01 | 93.9% | 43.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4877103 | 3694.1.1.3 ↗ | alpha bundles › Tail specific protease helical domain › Tail specific protease helical domain › Tail specific protease helical domain › TSP_NTD | 0.96 | 92.0 | 7.14e-01 | 100.0% | 88.7% |
| 3380671 | 5050.1.1.8 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FPN1 | 0.56 | 34.0 | 3.07e-01 | 92.2% | 43.1% |
| 3216082 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 25.0 | 2.53e-01 | 81.7% | 42.6% |
| 4641463 | 5050.1.1.54 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Mntp | 0.52 | 36.0 | 3.17e-01 | 73.0% | 53.5% |
| 4104358 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.52 | 29.0 | 3.02e-01 | 88.7% | 56.0% |
| 5046766 | 5050.1.1.10 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 | 0.51 | 34.0 | 2.80e-01 | 88.7% | 36.3% |
| 3587560 | 633.2.1.1 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein › EntA_Immun | 0.51 | 37.0 | 3.73e-01 | 95.7% | 76.5% |
D3
medium
residues 126-231
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gslF00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.59 | 35.0 | 3.33e-01 | 72.6% | 48.0% |
| 4yjwA00 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.58 | 42.0 | 3.71e-01 | 75.5% | 71.2% |
| 4d6wB02 | 6.10.140.740 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 39.0 | 4.24e-01 | 81.1% | 81.5% |
| 3rrkA02 | 1.20.1460.20 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › | 0.57 | 40.0 | 3.55e-01 | 72.6% | 61.3% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.56 | 44.0 | 3.62e-01 | 82.1% | 71.6% |
| 1lvlA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 41.0 | 3.27e-01 | 76.4% | 40.6% |
| 3tp3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 40.0 | 3.64e-01 | 79.2% | 80.4% |
| 2jjnA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 48.0 | 3.25e-01 | 100.0% | 60.5% |
| 3bg2A03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.53 | 37.0 | 3.93e-01 | 88.7% | 80.2% |
| 1ldjA02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.52 | 37.0 | 3.56e-01 | 75.5% | 91.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588615 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 38.0 | 4.09e-01 | 85.8% | 67.8% |
| 4586838 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.64 | 39.0 | 3.36e-01 | 74.5% | 41.9% |
| 3192159 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.63 | 45.0 | 4.49e-01 | 73.6% | 80.9% |
| 3634960 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.63 | 46.0 | 4.55e-01 | 88.7% | 72.7% |
| 3485540 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.59 | 46.0 | 3.82e-01 | 90.6% | 49.1% |
| 3600606 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.59 | 50.0 | 4.23e-01 | 92.5% | 99.4% |
| 3353117 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.59 | 51.0 | 3.64e-01 | 93.4% | 35.0% |
| 3168929 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.58 | 47.0 | 3.90e-01 | 84.0% | 70.3% |
| 3184462 | 1065.1.1.1 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain › SPX | 0.58 | 42.0 | 3.42e-01 | 75.5% | 65.6% |
| 3648942 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.57 | 48.0 | 4.19e-01 | 88.7% | 71.0% |
| 3449084 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.57 | 48.0 | 4.91e-01 | 92.5% | 90.5% |
| 5033256 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.57 | 46.0 | 3.90e-01 | 84.0% | 69.1% |
| 3739342 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.57 | 48.0 | 3.44e-01 | 90.6% | 32.2% |
| 4970712 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.56 | 43.0 | 4.36e-01 | 86.8% | 81.0% |
| 5082774 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.56 | 44.0 | 3.87e-01 | 82.1% | 65.3% |
| 3738100 | 3722.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain | 0.56 | 45.0 | 3.14e-01 | 89.6% | 28.1% |
| 3575794 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.55 | 46.0 | 4.37e-01 | 89.6% | 86.4% |
| 3688613 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.55 | 43.0 | 3.48e-01 | 82.1% | 91.3% |
| 3815948 | 208.1.1.11 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › SDH5_plant | 0.55 | 44.0 | 3.62e-01 | 86.8% | 56.9% |
| 3317749 | 3758.1.1.36 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › SDH5_plant | 0.54 | 44.0 | 4.01e-01 | 86.8% | 69.3% |
| 3949328 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.54 | 44.0 | 4.40e-01 | 90.6% | 83.6% |
| 3929630 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.54 | 45.0 | 3.94e-01 | 89.6% | 67.7% |
| 3264751 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.53 | 44.0 | 4.02e-01 | 91.5% | 71.0% |
| 3214390 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.53 | 44.0 | 4.02e-01 | 89.6% | 90.0% |
| 3197687 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.51 | 45.0 | 2.91e-01 | 97.2% | 41.0% |
| 3226292 | 5050.1.1.6 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP | 0.51 | 45.0 | 3.47e-01 | 100.0% | 62.7% |
| 3906129 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 44.0 | 4.18e-01 | 94.3% | 77.6% |
| 4944522 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.51 | 42.0 | 3.20e-01 | 87.7% | 38.4% |
| 3973899 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.51 | 45.0 | 4.07e-01 | 98.1% | 73.8% |
| 2329646 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.51 | 46.0 | 3.64e-01 | 100.0% | 79.1% |
| 4397604 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.51 | 36.0 | 3.36e-01 | 90.6% | 58.5% |
D4
medium
residues 371-464_485-529_558-577
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03572.24 best | Peptidase_S41 | 49.3 | 5.90e-13 | 49.7% | 36.4% |
| PF03572.24 | Peptidase_S41 | 51.7 | 1.10e-13 | 35.9% | 27.9% |
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dorA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.85 | 79.0 | 6.55e-01 | 95.6% | 87.0% |
| 1fc6A03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.85 | 79.0 | 7.30e-01 | 95.0% | 90.6% |
| 4ghnA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 74.0 | 7.17e-01 | 96.2% | 87.7% |
| 3k50A03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 72.0 | 6.88e-01 | 96.9% | 84.3% |
| 1j7xA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.78 | 73.0 | 6.46e-01 | 96.2% | 82.2% |
| 4lurA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.78 | 72.0 | 6.12e-01 | 96.2% | 80.8% |
| 4l8kD02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 71.0 | 6.29e-01 | 96.2% | 77.3% |
| 4qtpD00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.74 | 49.0 | 5.65e-01 | 92.5% | 92.2% |
| 1k32A05 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.73 | 67.0 | 6.08e-01 | 96.9% | 87.9% |
| 1vc1A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.72 | 49.0 | 5.78e-01 | 93.1% | 99.1% |
| 4dgfA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.71 | 46.0 | 5.20e-01 | 88.1% | 84.4% |
| 4xs5B00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.70 | 45.0 | 5.18e-01 | 89.9% | 88.6% |
| 2yijB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 60.0 | 4.46e-01 | 100.0% | 65.5% |
| 7blfB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 55.0 | 4.18e-01 | 96.2% | 66.3% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.61 | 27.0 | 3.41e-01 | 71.7% | 67.0% |
| 3tjlA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 54.0 | 4.05e-01 | 97.5% | 62.1% |
| 1lgyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 55.0 | 4.59e-01 | 100.0% | 75.1% |
| 3sqsA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 49.0 | 4.22e-01 | 96.2% | 56.9% |
| 3tghA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.59 | 53.0 | 4.25e-01 | 98.7% | 56.8% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.59 | 44.0 | 4.78e-01 | 93.7% | 93.2% |
| 2p8bA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 47.0 | 4.12e-01 | 95.6% | 57.0% |
| 7b1xA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 53.0 | 4.32e-01 | 100.0% | 81.7% |
| 3qxbA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 51.0 | 4.20e-01 | 97.5% | 68.7% |
| 3ddmA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 45.0 | 3.93e-01 | 96.2% | 55.5% |
| 3cjpA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 51.0 | 4.30e-01 | 98.7% | 66.8% |
| 2x7vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.56 | 50.0 | 4.19e-01 | 100.0% | 66.8% |
| 3gveA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.56 | 50.0 | 3.95e-01 | 97.5% | 56.9% |
| 3zidB00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.56 | 46.0 | 3.56e-01 | 86.8% | 69.6% |
| 2aamC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 49.0 | 4.07e-01 | 97.5% | 64.3% |
| 2czdB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 42.0 | 3.91e-01 | 95.0% | 62.8% |
| 1jmkC01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 47.0 | 4.61e-01 | 98.1% | 85.5% |
| 4aktB00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.55 | 46.0 | 3.59e-01 | 88.7% | 72.1% |
| 1wueA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 42.0 | 3.85e-01 | 98.1% | 60.0% |
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 49.0 | 4.01e-01 | 100.0% | 56.5% |
| 7xg9A01 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.54 | 49.0 | 4.04e-01 | 98.7% | 62.0% |
| 3fkkA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 48.0 | 3.95e-01 | 99.4% | 56.6% |
| 3a9iA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 48.0 | 4.11e-01 | 99.4% | 64.0% |
| 2wddA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 46.0 | 3.77e-01 | 98.1% | 50.7% |
| 4yhsA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 38.0 | 4.27e-01 | 76.7% | 93.7% |
| 2fzvA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 46.0 | 4.08e-01 | 96.2% | 83.4% |
| 4is2A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 46.0 | 4.14e-01 | 93.1% | 95.3% |
| 1egaA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 29.0 | 3.46e-01 | 81.1% | 79.2% |
| 2ohhA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.52 | 39.0 | 4.11e-01 | 93.7% | 86.8% |
| 3o1iD02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 41.0 | 4.13e-01 | 83.6% | 83.3% |
| 3vk5B00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.52 | 44.0 | 3.79e-01 | 91.2% | 57.5% |
| 3lcrB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 47.0 | 3.90e-01 | 98.7% | 80.2% |
| 2d6fA03 | 3.40.50.40 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 42.0 | 4.50e-01 | 91.2% | 100.0% |
| 6gs8A01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.51 | 45.0 | 3.68e-01 | 96.9% | 54.7% |
| 1m3uA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.50 | 45.0 | 3.82e-01 | 98.1% | 79.4% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968847 | 2486.1.1.8 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41,DUF3340 | 0.97 | 95.0 | 7.03e-01 | 100.0% | 58.8% |
| 3164821 | 2486.1.1.8 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41,DUF3340 | 0.87 | 85.0 | 6.26e-01 | 100.0% | 55.7% |
| 1406102 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.86 | 82.0 | 6.43e-01 | 98.1% | 62.7% |
| 3829518 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.86 | 81.0 | 6.82e-01 | 96.2% | 78.2% |
| 4495999 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.85 | 79.0 | 7.40e-01 | 94.3% | 85.4% |
| 1099098 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.85 | 79.0 | 6.03e-01 | 95.6% | 88.4% |
| 4521582 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.85 | 79.0 | 5.95e-01 | 96.2% | 84.8% |
| 1030864 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.85 | 79.0 | 7.00e-01 | 96.2% | 88.8% |
| 3674852 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.85 | 78.0 | 7.06e-01 | 95.0% | 89.7% |
| 4263877 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.83 | 77.0 | 7.13e-01 | 95.0% | 94.2% |
| 4134619 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.82 | 75.0 | 7.69e-01 | 93.7% | 100.0% |
| 3839764 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.82 | 77.0 | 6.51e-01 | 96.2% | 75.7% |
| 4486980 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.81 | 79.0 | 6.57e-01 | 100.0% | 77.6% |
| 4307447 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.81 | 78.0 | 7.09e-01 | 98.7% | 92.0% |
| 2564163 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.80 | 75.0 | 6.84e-01 | 95.6% | 90.3% |
| 3690753 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.80 | 74.0 | 5.27e-01 | 96.2% | 79.8% |
| 4338132 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.80 | 74.0 | 5.71e-01 | 96.2% | 81.8% |
| 3184158 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.80 | 73.0 | 5.55e-01 | 96.2% | 81.2% |
| 1070249 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.80 | 74.0 | 6.37e-01 | 96.9% | 87.8% |
| 1174358 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.79 | 74.0 | 6.76e-01 | 96.2% | 87.8% |
| 5080813 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.79 | 73.0 | 6.23e-01 | 96.2% | 90.2% |
| 4014106 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.78 | 72.0 | 6.34e-01 | 96.2% | 80.0% |
| None | — | 0.78 | 73.0 | 6.27e-01 | 96.2% | 84.3% | |
| 3564180 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.78 | 73.0 | 6.21e-01 | 96.2% | 82.1% |
| None | — | 0.78 | 73.0 | 6.43e-01 | 96.2% | 82.8% | |
| None | — | 0.78 | 73.0 | 6.31e-01 | 96.2% | 85.3% | |
| 1725854 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.78 | 71.0 | 6.39e-01 | 95.0% | 91.8% |
| 3724562 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.78 | 72.0 | 5.20e-01 | 96.2% | 84.6% |
| 1422901 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.78 | 72.0 | 6.12e-01 | 96.2% | 80.8% |
| None | — | 0.78 | 72.0 | 6.50e-01 | 96.2% | 84.9% | |
| 3749256 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.78 | 72.0 | 6.06e-01 | 96.2% | 80.0% |
| 4285425 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.77 | 72.0 | 6.55e-01 | 96.2% | 81.5% |
| 4022124 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.77 | 73.0 | 5.55e-01 | 99.4% | 91.6% |
| 3734335 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.77 | 71.0 | 5.55e-01 | 96.2% | 81.0% |
| 1393683 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.77 | 71.0 | 6.13e-01 | 96.2% | 80.2% |
| 4944017 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.76 | 70.0 | 5.69e-01 | 95.6% | 82.2% |
| 4877105 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.76 | 70.0 | 6.52e-01 | 95.6% | 100.0% |
| 4882730 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.75 | 69.0 | 6.44e-01 | 96.2% | 99.0% |
| 3283969 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.75 | 50.0 | 5.98e-01 | 91.8% | 98.2% |
| 4228838 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.74 | 48.0 | 5.70e-01 | 91.8% | 95.5% |
| 1314498 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.73 | 49.0 | 5.59e-01 | 92.5% | 91.4% |
| 3284133 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.73 | 47.0 | 5.48e-01 | 89.9% | 90.4% |
| 4052423 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.72 | 67.0 | 5.95e-01 | 96.9% | 84.2% |
| 1498185 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.72 | 48.0 | 5.45e-01 | 93.1% | 88.5% |
| 3957136 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.71 | 47.0 | 5.48e-01 | 91.8% | 93.0% |
| 4206570 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.69 | 51.0 | 5.65e-01 | 93.7% | 96.8% |
| 4942693 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.62 | 50.0 | 4.28e-01 | 95.0% | 55.1% |
| 5041337 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.61 | 51.0 | 4.19e-01 | 88.7% | 73.3% |
| 3685610 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.60 | 53.0 | 5.35e-01 | 94.3% | 96.9% |
| 181863 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.59 | 49.0 | 4.21e-01 | 96.2% | 56.6% |
| 4335308 | 2006.1.6.38 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 | 0.59 | 48.0 | 4.49e-01 | 86.2% | 90.3% |
| 4648077 | 2006.1.6.38 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 | 0.58 | 49.0 | 4.03e-01 | 88.7% | 91.6% |
| 3174873 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.58 | 51.0 | 4.73e-01 | 95.6% | 95.5% |
| 3685663 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.58 | 51.0 | 4.05e-01 | 95.6% | 51.6% |
| 3711343 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.55 | 49.0 | 3.53e-01 | 98.7% | 96.6% |
| 3391312 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.54 | 46.0 | 4.34e-01 | 93.7% | 74.9% |
| 4092361 | 2002.1.1.90 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR | 0.54 | 49.0 | 4.03e-01 | 99.4% | 62.2% |
| 3996187 | 7512.1.1.54 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 | 0.53 | 42.0 | 4.51e-01 | 93.7% | 100.0% |
| 3205704 | 7579.1.1.126 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PF26147 | 0.53 | 48.0 | 3.66e-01 | 100.0% | 96.5% |
| 4971660 | 2007.2.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red | 0.52 | 45.0 | 4.23e-01 | 98.1% | 76.4% |
| 4018358 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.51 | 46.0 | 3.78e-01 | 97.5% | 86.0% |
| 4297122 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.51 | 44.0 | 3.86e-01 | 93.1% | 96.2% |
| 4002702 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.50 | 45.0 | 3.97e-01 | 100.0% | 70.4% |
D5
medium
residues 465-484_530-557_578-599
Domain cluster:
representative
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4263877 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.77 | 54.0 | 3.85e-01 | 72.9% | 49.5% |
| 4486980 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.76 | 70.0 | 4.65e-01 | 100.0% | 69.6% |
| 3829518 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.73 | 58.0 | 3.90e-01 | 84.3% | 39.7% |
| 3839764 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.67 | 53.0 | 3.62e-01 | 84.3% | 40.9% |
| 2564163 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.58 | 45.0 | 3.29e-01 | 84.3% | 48.5% |
| 3915532 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 33.0 | 3.01e-01 | 100.0% | 45.3% |
D6
medium
residues 600-724
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11818.14 best | DUF3340 | 69.1 | 6.70e-19 | 100.0% | 78.7% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.59 | 28.0 | 3.18e-01 | 93.6% | 55.7% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 30.0 | 3.87e-01 | 72.8% | 89.6% |
| 1rx0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 36.0 | 3.37e-01 | 86.4% | 49.7% |
| 7c4sB01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 47.0 | 3.68e-01 | 88.8% | 83.7% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 34.0 | 3.71e-01 | 94.4% | 73.3% |
| 2wauA02 | 1.20.58.830 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 38.0 | 3.87e-01 | 81.6% | 71.3% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 33.0 | 3.40e-01 | 76.0% | 60.8% |
| 2odvA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 34.0 | 3.55e-01 | 92.0% | 68.8% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 37.0 | 3.60e-01 | 72.8% | 77.9% |
| 2pbeA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 38.0 | 3.84e-01 | 74.4% | 84.9% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 41.0 | 3.46e-01 | 84.0% | 96.4% |
| 3rx6A00 | 1.20.58.1090 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer | 0.53 | 33.0 | 2.97e-01 | 94.4% | 41.7% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.52 | 37.0 | 3.88e-01 | 74.4% | 80.3% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.52 | 38.0 | 3.88e-01 | 77.6% | 100.0% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.51 | 33.0 | 3.67e-01 | 88.0% | 82.8% |
| 4iw9A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 40.0 | 4.20e-01 | 82.4% | 97.3% |
| 2o7tA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 35.0 | 3.14e-01 | 71.2% | 54.6% |
| 2lquA01 | 1.20.1420.40 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Decorin-binding protein | 0.50 | 40.0 | 3.73e-01 | 84.0% | 84.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968847 | 2486.1.1.8 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41,DUF3340 | 0.83 | 74.0 | 5.17e-01 | 100.0% | 33.3% |
| 3164821 | 2486.1.1.8 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41,DUF3340 | 0.77 | 65.0 | 4.66e-01 | 100.0% | 32.0% |
| 3972016 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.64 | 35.0 | 4.02e-01 | 97.6% | 72.2% |
| 5018642 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.64 | 37.0 | 4.06e-01 | 100.0% | 68.6% |
| 3181479 | 1075.1.1.9 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › DUF3533 | 0.63 | 37.0 | 3.15e-01 | 100.0% | 36.4% |
| 3577937 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.59 | 38.0 | 3.94e-01 | 76.8% | 69.6% |
| 3608506 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 46.0 | 3.64e-01 | 83.2% | 94.5% |
| 3234580 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.57 | 44.0 | 3.80e-01 | 81.6% | 68.2% |
| 5028691 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.56 | 33.0 | 3.50e-01 | 100.0% | 64.5% |
| 3725376 | 192.1.1.15 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF6604 | 0.56 | 30.0 | 3.67e-01 | 81.6% | 81.2% |
| 4928764 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.55 | 44.0 | 4.04e-01 | 84.0% | 96.2% |
| 3839022 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.54 | 37.0 | 3.18e-01 | 100.0% | 42.9% |
| 3490510 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.54 | 38.0 | 3.30e-01 | 71.2% | 97.9% |
| 5040026 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.54 | 42.0 | 4.08e-01 | 81.6% | 99.3% |
| 4023594 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 40.0 | 3.80e-01 | 76.8% | 85.5% |
| 3345061 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.53 | 38.0 | 3.51e-01 | 72.8% | 64.5% |
| 3504303 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 35.0 | 3.88e-01 | 75.2% | 83.0% |
| 3596373 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 44.0 | 2.70e-01 | 90.4% | 57.0% |
| 4941837 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.52 | 44.0 | 4.37e-01 | 93.6% | 100.0% |
| 4988441 | 5069.1.1.10 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF4079 | 0.50 | 36.0 | 3.54e-01 | 75.2% | 100.0% |
| 4518438 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.50 | 42.0 | 3.55e-01 | 92.8% | 59.1% |