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KR093647.1__AKI27975.1__X__00014

Bact-Vir

KR093647.1__AKI27975.1__X__00014

Identity

Accession:
KR093647 ↗
Kingdom:
phage

Quality

77.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-97
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16459.12 best Phage_TAC_13 38.2 2.00e-09 96.2% 69.4%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ob9A00 3.30.2220.20 Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like 0.83 75.0 6.76e-01 100.0% 83.2%
4evfA01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.57 34.0 3.56e-01 97.5% 64.8%
1vb3A01 3.90.1380.10 Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain 0.56 43.0 4.27e-01 82.3% 97.5%
2posA00 1.10.239.10 Mainly Alpha › Orthogonal Bundle › Beta-cryptogein › Elicitin domain 0.56 37.0 3.58e-01 100.0% 57.4%
2bfwA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 39.0 3.03e-01 73.4% 82.5%
4xr7E01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.54 41.0 2.87e-01 84.8% 39.3%
3hc1A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.54 45.0 3.16e-01 97.5% 77.5%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.54 36.0 3.44e-01 70.9% 88.9%
4z7xB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 40.0 3.09e-01 84.8% 68.3%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 31.0 3.05e-01 88.6% 50.0%
3vr4B04 1.10.1140.10 Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 0.53 38.0 3.21e-01 79.7% 69.5%
3h5aD01 3.90.930.70 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.51 35.0 3.38e-01 100.0% 63.6%
2qg3A00 3.30.1960.10 Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like 0.51 38.0 2.89e-01 81.0% 77.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
333304 6050.1.1.1 a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_1 0.82 74.0 6.77e-01 100.0% 78.8%
3968270 3103.1.1.2 alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_13 0.78 71.0 6.32e-01 100.0% 81.8%
4010073 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.59 38.0 3.92e-01 73.4% 68.0%
5083571 101.1.2.242 alpha arrays › HTH › HTH › winged helix domain › RepL 0.59 38.0 3.41e-01 82.3% 45.2%
3724015 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.58 44.0 3.70e-01 82.3% 87.1%
3612295 7532.1.1.1 a/b three-layered sandwiches › Phosphoglycerate kinase domain 1 › Phosphoglycerate kinase domain 1 › Phosphoglycerate kinase domain 1 › PGK 0.57 39.0 2.78e-01 70.9% 33.5%
4000254 3065.1.1.1 alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › ANIS5_cation-bd 0.56 41.0 3.55e-01 100.0% 49.6%
4138616 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.53 38.0 4.04e-01 83.5% 92.3%
4872371 3144.1.1.1 alpha arrays › PBS linker domain of phycobilisome linker polypeptide › PBS linker domain of phycobilisome linker polypeptide › PBS linker domain of phycobilisome linker polypeptide › PBS_linker_poly 0.53 40.0 3.19e-01 83.5% 82.6%