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KR093649.1__AKI28069.1__X__00001
Bact-VirKR093649.1__AKI28069.1__X__00001
Identity
- Accession:
- KR093649 ↗
- Kingdom:
- phage
Quality
76.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 110-229_241-290_304-368
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05860.20 best | TPS | 110.9 | 1.40e-31 | 93.6% | 84.9% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.94 | 92.0 | 8.35e-01 | 100.0% | 82.5% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.91 | 76.0 | 7.67e-01 | 85.1% | 85.0% |
| 2odlA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 75.0 | 6.23e-01 | 100.0% | 62.4% |
| 4i84A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 75.0 | 6.80e-01 | 100.0% | 78.4% |
| 1ee6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 58.0 | 6.36e-01 | 96.2% | 97.5% |
| 7o7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.65 | 62.0 | 5.11e-01 | 100.0% | 61.8% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.65 | 50.0 | 5.56e-01 | 90.2% | 98.9% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.64 | 60.0 | 5.59e-01 | 99.6% | 82.1% |
| 4ojuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 38.0 | 4.74e-01 | 97.9% | 96.5% |
| 1jtaA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.63 | 59.0 | 5.07e-01 | 99.6% | 73.1% |
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.63 | 59.0 | 4.45e-01 | 100.0% | 61.3% |
| 3petA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 52.0 | 5.44e-01 | 99.1% | 95.0% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 59.0 | 4.39e-01 | 100.0% | 61.9% |
| 1pxzA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 58.0 | 5.06e-01 | 100.0% | 71.1% |
| 3eqnA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 58.0 | 4.97e-01 | 100.0% | 83.1% |
| 3ljyA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 52.0 | 5.25e-01 | 100.0% | 87.4% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 40.0 | 4.78e-01 | 99.1% | 96.8% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 41.0 | 4.82e-01 | 92.3% | 100.0% |
| 4c2lA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.60 | 56.0 | 4.80e-01 | 100.0% | 68.3% |
| 5c1cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.60 | 55.0 | 5.05e-01 | 100.0% | 76.3% |
| 8tmsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.60 | 55.0 | 5.22e-01 | 99.1% | 100.0% |
| 3b4nA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.60 | 52.0 | 5.32e-01 | 97.4% | 95.1% |
| 3jx8A00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.59 | 52.0 | 5.11e-01 | 99.6% | 87.4% |
| 1ea0A04 | 2.160.20.60 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Glutamate synthase, alpha subunit, C-terminal domain | 0.59 | 53.0 | 5.08e-01 | 100.0% | 83.6% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3944126 | 207.2.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS | 0.94 | 93.0 | 8.51e-01 | 100.0% | 86.0% |
| 7226 | 207.2.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS | 0.94 | 92.0 | 8.35e-01 | 100.0% | 82.5% |
| 2643562 | 207.2.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS | 0.91 | 77.0 | 7.63e-01 | 86.0% | 83.4% |
| 4375312 | 207.2.1.106 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS, Fil_haemagg_2 | 0.90 | 89.0 | 6.77e-01 | 100.0% | 51.7% |
| 5078879 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.85 | 52.0 | 5.70e-01 | 100.0% | 72.5% |
| 4307386 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.84 | 49.0 | 5.53e-01 | 100.0% | 73.0% |
| 3945380 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.84 | 37.0 | 5.86e-01 | 79.1% | 100.0% |
| 5048136 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.83 | 53.0 | 5.26e-01 | 100.0% | 61.2% |
| 5006685 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.81 | 39.0 | 5.12e-01 | 99.6% | 79.3% |
| 3567623 | 208.7.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Epiglycanin_TR | 0.79 | 44.0 | 5.26e-01 | 100.0% | 78.8% |
| 5055230 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 57.0 | 5.51e-01 | 100.0% | 65.8% |
| 3793209 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 53.0 | 4.73e-01 | 100.0% | 49.4% |
| 3971762 | 207.2.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS | 0.79 | 76.0 | 5.97e-01 | 100.0% | 55.5% |
| 1109400 | 207.2.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS | 0.78 | 75.0 | 6.80e-01 | 100.0% | 78.4% |
| 2429370 | 207.13.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix | 0.77 | 55.0 | 4.76e-01 | 100.0% | 48.5% |
| 5082073 | 207.10.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Arctic yeast antifreeze protein › Arctic yeast antifreeze protein › Ice_binding | 0.76 | 42.0 | 4.38e-01 | 79.6% | 58.2% |
| 5037365 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 51.0 | 5.20e-01 | 100.0% | 69.8% |
| 3546698 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.74 | 50.0 | 6.00e-01 | 81.3% | 99.4% |
| 4028145 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.72 | 46.0 | 5.53e-01 | 94.5% | 96.8% |
| 3253669 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 56.0 | 5.14e-01 | 100.0% | 65.7% |
| 3703307 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.66 | 53.0 | 5.40e-01 | 99.1% | 84.3% |
| 5061677 | 207.7.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Alpha subunit of glutamate synthase-C › Alpha subunit of glutamate synthase-C › GXGXG | 0.66 | 50.0 | 5.26e-01 | 100.0% | 85.7% |
| 4969636 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.64 | 60.0 | 4.51e-01 | 100.0% | 44.2% |
| 998972 | 207.2.1.18 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DUF2807 | 0.62 | 52.0 | 5.44e-01 | 99.1% | 95.0% |
| 4946338 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.62 | 58.0 | 5.24e-01 | 100.0% | 83.9% |
| 5021650 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.61 | 57.0 | 5.27e-01 | 100.0% | 79.3% |
| 5058805 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.61 | 57.0 | 4.53e-01 | 100.0% | 66.4% |
| 5058080 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.60 | 55.0 | 4.63e-01 | 97.9% | 72.5% |
| 5022823 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.60 | 57.0 | 5.13e-01 | 100.0% | 83.2% |
| 3422947 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.60 | 56.0 | 4.57e-01 | 100.0% | 68.1% |
| 4333063 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.60 | 56.0 | 5.03e-01 | 100.0% | 80.0% |
| 4963654 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.60 | 56.0 | 4.66e-01 | 99.6% | 69.1% |
| 5010532 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.60 | 56.0 | 4.74e-01 | 100.0% | 68.8% |
| 3855439 | 207.8.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD | 0.59 | 54.0 | 5.05e-01 | 98.7% | 79.6% |
| 4995410 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.59 | 54.0 | 4.79e-01 | 96.6% | 70.8% |
| 5078382 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.59 | 55.0 | 5.01e-01 | 100.0% | 86.6% |
| 3165270 | 207.2.1.10 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin | 0.57 | 52.0 | 5.04e-01 | 100.0% | 88.1% |
| 3775495 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.56 | 52.0 | 5.07e-01 | 100.0% | 91.5% |
D2
medium
residues 369-480
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pmhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 73.0 | 4.96e-01 | 100.0% | 46.2% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.74 | 58.0 | 6.15e-01 | 98.2% | 93.8% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 68.0 | 5.34e-01 | 100.0% | 64.6% |
| 5olpA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 67.0 | 4.46e-01 | 100.0% | 29.4% |
| 4hwvB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 68.0 | 4.34e-01 | 100.0% | 32.2% |
| 3zscA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 68.0 | 4.73e-01 | 100.0% | 38.9% |
| 3grhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 66.0 | 4.44e-01 | 100.0% | 45.8% |
| 1ea0A04 | 2.160.20.60 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Glutamate synthase, alpha subunit, C-terminal domain | 0.63 | 56.0 | 4.27e-01 | 100.0% | 51.7% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.63 | 55.0 | 4.91e-01 | 100.0% | 68.8% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 54.0 | 4.81e-01 | 100.0% | 68.8% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 56.0 | 4.66e-01 | 100.0% | 66.3% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 56.0 | 4.97e-01 | 100.0% | 73.4% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.60 | 50.0 | 5.16e-01 | 93.8% | 95.3% |
| 1gwbA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.60 | 51.0 | 3.95e-01 | 100.0% | 40.8% |
| 2yuhA01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 52.0 | 4.53e-01 | 99.1% | 73.8% |
| 1gu7A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 36.0 | 3.11e-01 | 72.3% | 72.9% |
| 2oasA01 | 3.40.1080.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase | 0.50 | 37.0 | 3.25e-01 | 78.6% | 49.4% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5020283 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.87 | 62.0 | 6.01e-01 | 100.0% | 66.4% |
| 5005047 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.85 | 62.0 | 5.70e-01 | 100.0% | 60.0% |
| 4949774 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.85 | 60.0 | 5.43e-01 | 100.0% | 55.9% |
| 4020264 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.84 | 62.0 | 6.42e-01 | 100.0% | 81.9% |
| 4024907 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.82 | 63.0 | 6.10e-01 | 100.0% | 72.0% |
| 2516583 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.82 | 58.0 | 6.40e-01 | 99.1% | 90.0% |
| 1720156 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.78 | 54.0 | 5.63e-01 | 100.0% | 77.7% |
| 4028145 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.78 | 62.0 | 5.53e-01 | 100.0% | 61.0% |
| 3269404 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.77 | 73.0 | 4.68e-01 | 100.0% | 26.3% |
| 3268558 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.77 | 70.0 | 4.39e-01 | 100.0% | 20.0% |
| 3252391 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.76 | 71.0 | 5.65e-01 | 100.0% | 53.3% |
| 2325227 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.76 | 70.0 | 4.78e-01 | 100.0% | 33.6% |
| 3567623 | 208.7.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Epiglycanin_TR | 0.76 | 48.0 | 4.26e-01 | 99.1% | 45.0% |
| 3803805 | 207.2.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase | 0.74 | 69.0 | 5.67e-01 | 100.0% | 63.7% |
| 3680585 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.74 | 68.0 | 5.24e-01 | 100.0% | 50.4% |
| 3705677 | 207.2.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 68.0 | 4.32e-01 | 100.0% | 34.1% |
| 3575994 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.72 | 48.0 | 5.67e-01 | 81.2% | 100.0% |
| 3572525 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.72 | 47.0 | 5.35e-01 | 98.2% | 91.3% |
| 3905958 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.68 | 51.0 | 4.74e-01 | 100.0% | 63.7% |
| 5013915 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.66 | 62.0 | 4.28e-01 | 100.0% | 46.3% |
| 3175357 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.66 | 49.0 | 4.50e-01 | 78.6% | 82.8% |
| 4963654 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.65 | 60.0 | 4.06e-01 | 100.0% | 35.2% |
| 5078382 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.64 | 57.0 | 4.23e-01 | 100.0% | 54.4% |
| 3877532 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.64 | 46.0 | 4.21e-01 | 100.0% | 56.0% |
| 3959841 | 207.8.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD | 0.64 | 57.0 | 3.96e-01 | 100.0% | 43.1% |
| 3252993 | 207.2.1.72 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29671 | 0.62 | 55.0 | 4.47e-01 | 100.0% | 64.2% |
| 4030641 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.56 | 50.0 | 4.38e-01 | 98.2% | 84.2% |
D3
medium
residues 555-638
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qjvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 58.0 | 3.91e-01 | 100.0% | 38.6% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.63 | 51.0 | 4.03e-01 | 100.0% | 41.1% |
| 4nk6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 55.0 | 3.51e-01 | 100.0% | 30.4% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 55.0 | 3.93e-01 | 98.8% | 35.0% |
| 4qtzA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 48.0 | 3.28e-01 | 97.6% | 55.8% |
| 3e4cB00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 46.0 | 3.38e-01 | 98.8% | 84.4% |
| 1f1jA00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 45.0 | 3.36e-01 | 98.8% | 94.3% |
| 2funD00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 44.0 | 3.26e-01 | 97.6% | 62.7% |
| 2hxvA02 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.51 | 44.0 | 3.40e-01 | 98.8% | 44.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963707 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.65 | 40.0 | 4.16e-01 | 100.0% | 65.0% |
| 5006685 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.62 | 50.0 | 4.22e-01 | 100.0% | 52.1% |
| 1140481 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.62 | 55.0 | 3.51e-01 | 100.0% | 30.4% |
| 3665552 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 49.0 | 3.08e-01 | 100.0% | 15.8% |
| 4976134 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.57 | 50.0 | 3.43e-01 | 100.0% | 45.1% |
| 4030537 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.56 | 49.0 | 3.24e-01 | 100.0% | 23.3% |
| 5013088 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.52 | 42.0 | 2.93e-01 | 89.3% | 35.1% |
| 1954234 | 207.2.1.31 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Gp49_Pectate_lyase_like | 0.51 | 40.0 | 3.91e-01 | 95.2% | 77.1% |
D4
medium
residues 893-942_995-1121
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lshA03 | 2.20.50.20 | Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 | 0.69 | 38.0 | 5.10e-01 | 79.7% | 99.0% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.68 | 50.0 | 3.66e-01 | 87.0% | 30.5% |
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.65 | 41.0 | 3.08e-01 | 86.4% | 28.1% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.63 | 40.0 | 4.11e-01 | 78.5% | 64.9% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 38.0 | 4.21e-01 | 79.1% | 73.0% |
| 1e54A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.63 | 40.0 | 3.18e-01 | 80.8% | 34.1% |
| 6eheA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.61 | 40.0 | 3.36e-01 | 80.2% | 38.8% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.61 | 43.0 | 3.20e-01 | 85.9% | 30.5% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.61 | 39.0 | 3.22e-01 | 79.7% | 37.5% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.61 | 51.0 | 3.46e-01 | 88.1% | 27.2% |
| 4fqeA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.61 | 31.0 | 3.22e-01 | 76.8% | 49.4% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.60 | 42.0 | 4.55e-01 | 79.7% | 81.9% |
| 3qlbA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 51.0 | 3.55e-01 | 89.8% | 41.3% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.60 | 41.0 | 3.53e-01 | 87.6% | 44.4% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.59 | 53.0 | 3.65e-01 | 93.2% | 93.8% |
| 2oojA00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.59 | 33.0 | 3.76e-01 | 78.5% | 71.8% |
| 1by5A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.58 | 49.0 | 3.41e-01 | 88.1% | 35.4% |
| 6i7sG01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.58 | 35.0 | 3.11e-01 | 87.0% | 41.4% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.56 | 47.0 | 3.19e-01 | 88.7% | 25.3% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 30.0 | 3.50e-01 | 80.8% | 73.8% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 36.0 | 3.68e-01 | 79.1% | 68.0% |
| 3qq2B00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.55 | 38.0 | 3.34e-01 | 87.0% | 49.6% |
| 2vdfA00 | 2.40.128.100 | Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin | 0.54 | 37.0 | 3.43e-01 | 80.2% | 55.1% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.53 | 37.0 | 3.16e-01 | 90.4% | 45.7% |
| 2ynkA00 | 2.40.160.130 | Mainly Beta › Beta Barrel › Porin › Capsule assembly protein Wzi | 0.51 | 40.0 | 2.96e-01 | 87.0% | 32.7% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 26.0 | 2.87e-01 | 77.4% | 57.2% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.50 | 29.0 | 3.27e-01 | 79.1% | 72.2% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945018 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.75 | 44.0 | 3.30e-01 | 83.1% | 25.9% |
| 890 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.71 | 40.0 | 3.25e-01 | 80.8% | 29.7% |
| 4180622 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.65 | 49.0 | 3.95e-01 | 88.7% | 41.8% |
| 3965708 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.65 | 42.0 | 3.73e-01 | 83.6% | 47.1% |
| 3398781 | 5087.3.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd | 0.64 | 58.0 | 4.90e-01 | 96.0% | 78.9% |
| 3616128 | 5087.3.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd | 0.64 | 59.0 | 4.99e-01 | 97.2% | 77.7% |
| 4241521 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.64 | 42.0 | 3.41e-01 | 87.6% | 37.4% |
| 3515197 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.64 | 38.0 | 3.88e-01 | 81.4% | 61.2% |
| None | — | 0.63 | 38.0 | 4.21e-01 | 79.1% | 73.0% | |
| 3235810 | 5087.3.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd | 0.62 | 57.0 | 4.94e-01 | 98.3% | 88.5% |
| 3970016 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.61 | 41.0 | 3.17e-01 | 88.1% | 31.7% |
| 3933957 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.60 | 38.0 | 4.00e-01 | 82.5% | 68.8% |
| 4336262 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.60 | 44.0 | 3.45e-01 | 91.0% | 36.2% |
| 3964155 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.60 | 39.0 | 3.39e-01 | 80.8% | 43.3% |
| 5065294 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.59 | 37.0 | 3.77e-01 | 84.2% | 63.5% |
| 3981236 | 5084.5.4.6 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › TraF_2 | 0.58 | 39.0 | 3.33e-01 | 80.2% | 41.4% |
| 3925444 | 5087.3.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C | 0.58 | 54.0 | 5.14e-01 | 100.0% | 88.5% |
| 3484227 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.58 | 38.0 | 3.95e-01 | 80.2% | 68.8% |
| 3965241 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.58 | 37.0 | 3.11e-01 | 83.6% | 36.8% |
| 3964794 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.58 | 38.0 | 3.43e-01 | 84.2% | 48.3% |
| 3966214 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.58 | 41.0 | 3.07e-01 | 82.5% | 31.4% |
| 2156904 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.57 | 51.0 | 4.03e-01 | 94.4% | 53.6% |
| 4419134 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.57 | 40.0 | 3.37e-01 | 82.5% | 43.1% |
| 139764 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.57 | 37.0 | 3.21e-01 | 82.5% | 43.0% |
| 3965126 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.57 | 44.0 | 3.36e-01 | 86.4% | 36.4% |
| 4347483 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.54 | 39.0 | 3.11e-01 | 81.4% | 36.6% |
| 4662377 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.54 | 35.0 | 2.98e-01 | 84.2% | 38.3% |
| 3386238 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.54 | 38.0 | 3.07e-01 | 92.7% | 39.7% |
| 4102065 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.53 | 39.0 | 3.36e-01 | 81.9% | 48.4% |
| 3173251 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.52 | 39.0 | 4.00e-01 | 81.4% | 79.4% |
| 4222629 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.52 | 31.0 | 3.29e-01 | 73.4% | 65.8% |
| 4940004 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 27.0 | 3.25e-01 | 80.2% | 72.5% |
| 4099548 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.51 | 31.0 | 3.40e-01 | 78.0% | 71.3% |
| 875 | 9.13.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 | 0.50 | 29.0 | 3.27e-01 | 79.1% | 72.2% |
D5
medium
residues 1122-1195
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fzvD02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 35.0 | 3.08e-01 | 70.3% | 36.7% |
| 4lhpF00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.60 | 38.0 | 3.18e-01 | 70.3% | 36.9% |
| 4eogA01 | 3.40.50.10640 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like | 0.59 | 40.0 | 2.72e-01 | 71.6% | 67.8% |
| 3kosA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 33.0 | 2.94e-01 | 70.3% | 38.8% |
| 2fm7A00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.58 | 37.0 | 3.98e-01 | 70.3% | 77.4% |
| 2fltA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.57 | 37.0 | 3.22e-01 | 70.3% | 41.9% |
| 1lqlA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 38.0 | 3.44e-01 | 70.3% | 50.5% |
| 3c6vA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.56 | 37.0 | 3.01e-01 | 71.6% | 35.7% |
| 4fdxB00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.55 | 38.0 | 4.07e-01 | 74.3% | 96.9% |
| 5jpoD01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 31.0 | 3.02e-01 | 74.3% | 47.6% |
| 6ogmD00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.54 | 38.0 | 4.05e-01 | 73.0% | 96.7% |
| 1u9dA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.54 | 35.0 | 3.03e-01 | 73.0% | 39.3% |
| 3m21F00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.53 | 37.0 | 3.84e-01 | 73.0% | 92.5% |
| 4m1aA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.53 | 33.0 | 2.97e-01 | 71.6% | 42.1% |
| 2bx2L02 | 3.40.1260.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › Ribonuclease E, catalytic domain | 0.52 | 32.0 | 2.82e-01 | 70.3% | 40.0% |
| 3m20A00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.52 | 33.0 | 3.56e-01 | 70.3% | 79.7% |
| 4r9fA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 35.0 | 2.61e-01 | 100.0% | 25.4% |
| 2bpoA04 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.52 | 29.0 | 2.32e-01 | 70.3% | 24.7% |
| 4jj9C00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.51 | 35.0 | 2.84e-01 | 71.6% | 41.4% |
| 3n4dA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.51 | 33.0 | 2.75e-01 | 71.6% | 34.0% |
| 3mb2B00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.50 | 34.0 | 3.71e-01 | 73.0% | 100.0% |
| 2jaxA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 34.0 | 2.80e-01 | 70.3% | 41.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5026175 | 7516.1.1.79 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 | 0.59 | 41.0 | 2.62e-01 | 75.7% | 45.6% |
| 2137603 | 315.1.1.2 ↗ | a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › Tautomerase | 0.58 | 37.0 | 4.01e-01 | 70.3% | 80.0% |
| 3459195 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 34.0 | 2.66e-01 | 93.2% | 25.9% |
| 3885821 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.57 | 35.0 | 3.30e-01 | 70.3% | 48.4% |
| 3671803 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.55 | 30.0 | 3.22e-01 | 73.0% | 58.5% |
| 1030446 | 315.1.1.2 ↗ | a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › Tautomerase | 0.55 | 38.0 | 4.07e-01 | 74.3% | 96.9% |
| 2080133 | 3521.1.1.0 ↗ | a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain | 0.55 | 37.0 | 3.39e-01 | 74.3% | 51.5% |
| 3622500 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.54 | 36.0 | 2.79e-01 | 73.0% | 29.1% |
| 3306686 | 2002.1.1.19 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_17 | 0.53 | 40.0 | 2.98e-01 | 83.8% | 30.0% |
| 4953115 | 315.1.1.2 ↗ | a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › Tautomerase | 0.53 | 36.0 | 3.92e-01 | 73.0% | 98.3% |
| 3580076 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.52 | 44.0 | 3.78e-01 | 100.0% | 89.2% |
| 3449133 | 3100.1.1.0 ↗ | extended segments › Synaptobrevin › Synaptobrevin › Synaptobrevin | 0.52 | 36.0 | 2.67e-01 | 73.0% | 64.9% |
| 4632988 | 2007.1.14.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Ferrochelatase | 0.51 | 34.0 | 2.76e-01 | 71.6% | 33.5% |
| 5027830 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 36.0 | 2.82e-01 | 100.0% | 32.0% |
| 3176440 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.50 | 34.0 | 3.09e-01 | 98.6% | 50.5% |
| 1225034 | 315.1.1.3 ↗ | a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › CHMI | 0.50 | 35.0 | 2.87e-01 | 100.0% | 37.9% |
D6
medium
residues 1422-1494