←Back to structures
KR131710.1__AKC57506.1__HMPREF1993_00013__00012
Bact-VirKR131710.1__AKC57506.1__HMPREF1993_00013__00012
Identity
- Accession:
- KR131710 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 26-102
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.77 | 56.0 | 4.56e-01 | 75.3% | 43.6% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.72 | 44.0 | 4.74e-01 | 70.1% | 73.4% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 53.0 | 5.06e-01 | 81.8% | 70.5% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 46.0 | 4.40e-01 | 74.0% | 61.1% |
| 3lnrA00 | 1.20.120.1530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 50.0 | 3.93e-01 | 84.4% | 41.9% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 43.0 | 3.95e-01 | 70.1% | 57.8% |
| 6cnzF00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.59 | 43.0 | 3.37e-01 | 76.6% | 90.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591419 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.70 | 54.0 | 4.80e-01 | 84.4% | 59.0% |
| 4979225 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.57 | 41.0 | 3.06e-01 | 75.3% | 31.5% |
D2
medium
residues 169-203
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.80 | 66.0 | 5.58e-01 | 94.3% | 57.6% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 62.0 | 5.22e-01 | 100.0% | 52.9% |
| 1r4gA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.76 | 60.0 | 5.53e-01 | 100.0% | 67.9% |
| 2jnsA01 | 1.20.1270.220 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.75 | 60.0 | 4.65e-01 | 94.3% | 60.5% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.72 | 55.0 | 3.99e-01 | 94.3% | 29.9% |
| 1qycA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.68 | 50.0 | 3.68e-01 | 94.3% | 29.2% |
| 2wn5A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.63 | 49.0 | 3.16e-01 | 94.3% | 80.4% |
| 4griA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 52.0 | 3.86e-01 | 100.0% | 82.5% |
| 1j2jB00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 47.0 | 4.63e-01 | 100.0% | 90.2% |
| 3iwfB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 50.0 | 3.80e-01 | 91.4% | 83.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3772630 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.70 | 56.0 | 3.72e-01 | 97.1% | 21.8% |
| 3485227 | 3652.1.1.0 ↗ | alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 | 0.62 | 50.0 | 5.08e-01 | 97.1% | 100.0% |
| 5062139 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.59 | 46.0 | 2.58e-01 | 100.0% | 81.2% |