←Back to structures

KR131711.1__AKC57563.1__HMPREF1994_00004__00004

Bact-Vir

KR131711.1__AKC57563.1__HMPREF1994_00004__00004

Identity

Accession:
KR131711 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Fusobacterium_phage_Funu2

TaxID: 1640978

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-57
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07087.17 best DUF1353 47.5 1.60e-12 73.7% 47.2%
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tjjB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.64 55.0 3.93e-01 100.0% 52.2%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.63 40.0 3.66e-01 89.5% 46.3%
1yu0A02 2.80.20.10 Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein 0.63 54.0 4.10e-01 100.0% 84.9%
3daxB00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.59 48.0 2.86e-01 91.2% 72.3%
3danA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.57 49.0 2.91e-01 98.2% 87.1%
2edgA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 32.0 2.50e-01 71.9% 23.8%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 42.0 3.23e-01 86.0% 81.6%
7bj4A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 38.0 2.36e-01 75.4% 20.7%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 3.30e-01 96.5% 40.4%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 42.0 3.34e-01 96.5% 38.9%
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.54 43.0 3.23e-01 100.0% 72.5%
2r9yA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 37.0 2.83e-01 75.4% 58.9%
4dnjA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 42.0 2.66e-01 98.2% 71.7%
4ckbD03 2.40.50.830 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 38.0 3.07e-01 82.5% 71.6%
2kxtA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.53 37.0 2.84e-01 80.7% 96.4%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 2.62e-01 96.5% 14.9%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 42.0 3.45e-01 94.7% 80.2%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 34.0 2.30e-01 82.5% 14.7%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.04e-01 96.5% 39.2%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.51 34.0 3.62e-01 70.2% 97.9%
7c5wA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 41.0 3.13e-01 94.7% 83.1%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 34.0 3.37e-01 100.0% 65.2%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3285669 371.1.1.5 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › DUF1353 0.88 77.0 5.46e-01 94.7% 34.8%
3738575 2003.1.5.71 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 0.65 46.0 2.92e-01 75.4% 16.6%
3993799 3369.1.1.0 ↗ beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 0.65 57.0 4.04e-01 98.2% 62.9%
3398429 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.62 53.0 3.12e-01 100.0% 73.1%
4113520 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.61 47.0 4.17e-01 100.0% 56.5%
5066664 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.61 35.0 3.90e-01 77.2% 71.1%
4608466 2003.1.5.71 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 0.60 43.0 2.75e-01 75.4% 16.1%
4358402 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.59 47.0 2.83e-01 89.5% 77.9%
3686389 149.1.1.0 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 0.58 47.0 2.82e-01 89.5% 74.0%
3522329 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.56 47.0 2.79e-01 96.5% 69.7%
3574380 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.56 42.0 2.97e-01 84.2% 65.8%
3848514 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.56 46.0 2.76e-01 96.5% 71.5%
4652295 5084.5.1.52 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › SlpA_C 0.55 47.0 2.69e-01 98.2% 17.3%
4623792 243.1.1.34 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.54 40.0 3.21e-01 96.5% 37.6%
3589048 243.1.1.7 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N 0.54 40.0 3.08e-01 96.5% 33.6%
4664932 243.1.1.34 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.54 39.0 3.15e-01 96.5% 36.8%
3931849 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.54 46.0 3.64e-01 100.0% 65.6%
3313814 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.54 45.0 3.29e-01 100.0% 61.7%
4086336 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.53 42.0 3.00e-01 89.5% 71.4%
3541262 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.53 39.0 3.30e-01 80.7% 62.0%
3659467 243.1.1.45 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › S6PP_C 0.53 40.0 3.16e-01 84.2% 87.2%
3697872 136.1.1.3 ↗ alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › An_peroxidase 0.52 44.0 2.47e-01 98.2% 37.0%
4627197 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.52 40.0 3.04e-01 91.2% 71.5%
3540253 4.1.1.78 ↗ beta barrels › SH3 › SH3 › SH3 › TTD 0.52 35.0 3.12e-01 100.0% 44.2%
4950394 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.51 37.0 3.05e-01 78.9% 41.9%
4436162 243.1.1.34 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.51 39.0 3.12e-01 96.5% 38.5%
3960581 4091.1.1.0 ↗ beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.51 42.0 3.28e-01 94.7% 91.9%
4935679 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.51 39.0 3.41e-01 84.2% 63.3%
4957407 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.51 41.0 3.16e-01 89.5% 45.4%
3841163 3860.1.1.0 ↗ alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.51 34.0 3.03e-01 70.2% 44.4%
5002447 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.51 38.0 3.26e-01 82.5% 58.9%
3062762 7503.1.1.2 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › ABC_trans_aux 0.50 35.0 2.66e-01 75.4% 38.3%
2967043 216.1.1.32 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › PF29693 0.50 38.0 3.09e-01 93.0% 60.7%
3417770 7577.1.1.1 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.50 40.0 2.43e-01 94.7% 80.4%
5021263 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.50 37.0 2.92e-01 80.7% 44.8%
D2 medium residues 58-115
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07087.17 best DUF1353 59.8 2.20e-16 86.2% 51.6%
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2iylD01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.83 59.0 5.68e-01 89.7% 66.2%
1ls1A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.74 66.0 5.76e-01 100.0% 78.7%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 5.53e-01 93.1% 85.7%
1r1dA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.71 60.0 3.93e-01 93.1% 44.2%
3b9qA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.70 64.0 5.51e-01 100.0% 66.3%
3nqxA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.68 54.0 4.01e-01 94.8% 34.2%
3dfgA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 5.18e-01 84.5% 89.6%
2b3yA02 3.40.1060.10 Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 0.67 50.0 3.81e-01 79.3% 60.2%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 55.0 4.48e-01 94.8% 80.7%
3aq5A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.66 59.0 4.70e-01 100.0% 93.2%
6fhpD00 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.65 54.0 5.33e-01 94.8% 87.1%
3s63A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.65 53.0 4.79e-01 100.0% 64.8%
2yzvA00 1.10.4080.10 Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 0.64 56.0 3.59e-01 100.0% 35.0%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.64 55.0 3.70e-01 100.0% 26.1%
4s3mB02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.64 54.0 4.48e-01 96.6% 60.4%
1j3eA00 1.20.1380.10 Mainly Alpha › Up-down Bundle › Replication modulator SeqA, C-terminal DNA-binding domain › Replication modulator SeqA, C-terminal DNA-binding domain 0.64 51.0 4.04e-01 86.2% 99.1%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 56.0 4.24e-01 100.0% 86.4%
5ojcA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 54.0 4.05e-01 98.3% 86.4%
3nqwA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.63 46.0 3.32e-01 79.3% 41.6%
2js9A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.62 51.0 4.74e-01 100.0% 71.6%
4uurA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.62 52.0 4.19e-01 100.0% 88.7%
2hxoA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 51.0 3.97e-01 100.0% 52.1%
3aqtA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 51.0 3.66e-01 98.3% 57.9%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.61 52.0 3.96e-01 100.0% 88.6%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.61 51.0 3.92e-01 96.6% 82.7%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 52.0 4.77e-01 98.3% 82.1%
1dpgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 52.0 3.73e-01 98.3% 47.4%
5tqbB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 49.0 3.11e-01 94.8% 24.4%
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 48.0 4.45e-01 94.8% 82.3%
1sxjC03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.59 48.0 4.24e-01 96.6% 82.1%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 4.31e-01 100.0% 78.2%
3lv8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 46.0 3.27e-01 93.1% 31.4%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.27e-01 98.3% 76.9%
4qclA05 1.10.132.60 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain 0.56 45.0 3.46e-01 100.0% 83.9%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 48.0 4.21e-01 100.0% 63.3%
1q6aA00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.56 44.0 3.82e-01 96.6% 73.8%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 4.12e-01 100.0% 65.1%
2ggfA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 46.0 3.63e-01 98.3% 45.3%
3umcD02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 45.0 4.12e-01 91.4% 75.6%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.55 42.0 3.99e-01 89.7% 72.0%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 4.07e-01 100.0% 71.4%
2w4sA00 1.10.10.1440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain 0.54 41.0 3.65e-01 81.0% 68.6%
2vk9A04 1.10.274.80 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › 0.54 42.0 3.68e-01 96.6% 52.9%
1ivnA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 44.0 3.23e-01 96.6% 31.5%
2ky4A01 1.10.3130.20 Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › Phycobilisome linker domain 0.53 43.0 3.45e-01 98.3% 81.7%
3umgA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 45.0 4.30e-01 100.0% 93.0%
5gp9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.52 36.0 3.76e-01 86.2% 89.6%
1v4aA01 1.10.4050.10 Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE 0.52 37.0 3.16e-01 86.2% 43.1%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4938165 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.81 73.0 6.27e-01 100.0% 75.6%
4180031 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.80 58.0 6.20e-01 86.2% 90.0%
4929833 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.78 71.0 6.09e-01 100.0% 72.2%
5043977 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.78 71.0 6.48e-01 100.0% 78.7%
5042713 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.78 71.0 6.17e-01 100.0% 81.2%
4033612 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.78 57.0 6.06e-01 93.1% 90.0%
3789554 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.76 68.0 5.85e-01 100.0% 85.6%
4991188 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.75 65.0 3.99e-01 100.0% 16.4%
4948444 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.74 57.0 3.86e-01 96.6% 23.5%
5064030 182.1.3.0 ↗ alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX 0.74 61.0 5.25e-01 100.0% 56.8%
4489939 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.74 60.0 6.00e-01 96.6% 86.7%
3958294 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.73 66.0 5.69e-01 100.0% 81.1%
4348094 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.73 65.0 5.56e-01 100.0% 63.3%
5044994 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.73 64.0 5.65e-01 100.0% 81.2%
4214506 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.72 56.0 5.77e-01 87.9% 89.1%
4011325 168.1.1.0 ↗ alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain 0.71 61.0 4.48e-01 100.0% 40.6%
5053895 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.71 62.0 5.43e-01 96.6% 82.4%
4238328 106.1.1.3 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Bac_globin 0.70 63.0 4.97e-01 100.0% 88.1%
3436690 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.70 62.0 5.34e-01 100.0% 81.1%
4288099 106.1.1.3 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Bac_globin 0.69 62.0 4.77e-01 100.0% 82.2%
4028766 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.69 60.0 5.21e-01 98.3% 81.1%
3263245 198.1.1.1 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.69 59.0 5.38e-01 100.0% 73.1%
None — 0.69 53.0 3.43e-01 100.0% 18.3%
3477799 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.68 57.0 5.28e-01 100.0% 71.8%
4996540 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.68 60.0 5.31e-01 100.0% 76.5%
4461961 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.68 58.0 3.83e-01 96.6% 43.3%
4003475 101.1.2.166 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.67 55.0 4.65e-01 93.1% 69.0%
3387986 2008.1.1.59 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.67 57.0 3.83e-01 100.0% 24.6%
5040941 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 50.0 4.28e-01 84.5% 62.0%
3716313 109.4.1.1966 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30299, PF30301 0.66 53.0 3.18e-01 98.3% 10.9%
3216068 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.65 58.0 5.25e-01 100.0% 79.5%
3694889 4021.1.1.2 ↗ alpha arrays › alpha-helical domain in 2-methylcitrate dehydratase PrpD › alpha-helical domain in 2-methylcitrate dehydratase PrpD › alpha-helical domain in 2-methylcitrate dehydratase PrpD › MmgE_PrpD_N 0.65 53.0 3.37e-01 93.1% 84.9%
3167709 101.1.2.166 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.65 55.0 4.47e-01 98.3% 58.3%
4971640 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 55.0 3.41e-01 100.0% 16.1%
350072 198.1.1.1 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.64 53.0 4.92e-01 100.0% 71.6%
4934293 4993.1.1.0 ↗ extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit 0.64 51.0 4.72e-01 100.0% 67.5%
3758241 198.1.1.1 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.63 49.0 4.31e-01 100.0% 56.7%
3938410 7579.1.1.35 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PGAP1 0.62 53.0 3.38e-01 100.0% 18.1%
3694245 5051.1.1.10 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.62 50.0 2.93e-01 91.4% 66.6%
5025644 148.1.3.20 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.62 52.0 4.74e-01 96.6% 77.5%
4682562 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.61 51.0 3.70e-01 100.0% 37.3%
3732424 102.1.3.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain 0.60 50.0 4.53e-01 98.3% 90.6%
3453016 101.1.1.138 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD 0.60 51.0 4.96e-01 96.6% 89.2%
3648804 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 3.94e-01 93.1% 51.3%
3725961 5051.1.1.10 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.60 49.0 2.94e-01 100.0% 48.4%
4626177 101.32.1.0 ↗ alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin 0.58 48.0 4.47e-01 100.0% 80.0%
3940779 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.58 48.0 4.07e-01 96.6% 85.7%
3535212 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.58 49.0 4.30e-01 98.3% 93.3%
3223469 168.1.1.1 ↗ alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7 0.58 46.0 3.35e-01 100.0% 28.7%
5060192 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 4.80e-01 100.0% 87.7%
3505632 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.57 43.0 4.01e-01 100.0% 63.7%
3163573 101.1.2.52 ↗ alpha arrays › HTH › HTH › winged helix domain › KicB 0.57 46.0 3.90e-01 100.0% 67.8%
5041402 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 4.65e-01 100.0% 86.2%
3886075 101.1.17.16 ↗ alpha arrays › HTH › HTH › FF domain › FF_RHG35_4th 0.56 44.0 4.52e-01 94.8% 96.4%
3392763 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 4.25e-01 100.0% 80.0%
4543264 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 3.47e-01 100.0% 46.1%
5035389 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 44.0 3.99e-01 100.0% 62.4%
3340029 101.1.1.176 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DEK_C 0.56 45.0 4.30e-01 100.0% 77.3%
3191712 3619.1.1.1 ↗ alpha arrays › Nucleoporin NUP120 helical domain › Nucleoporin NUP120 helical domain › Nucleoporin NUP120 helical domain › NUP120_helical 0.55 44.0 2.96e-01 100.0% 49.0%
4018469 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 3.75e-01 94.8% 55.2%
5018787 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.55 46.0 3.43e-01 100.0% 46.1%
3483775 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.55 45.0 3.55e-01 98.3% 42.1%
3946046 101.1.2.52 ↗ alpha arrays › HTH › HTH › winged helix domain › KicB 0.54 44.0 4.16e-01 98.3% 77.3%
3726085 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.54 44.0 3.99e-01 100.0% 65.9%
None — 0.54 45.0 3.07e-01 100.0% 26.1%
4513921 101.7.1.1 ↗ alpha arrays › HTH › DEK-C › DEK-C › DEK_C 0.54 43.0 4.31e-01 100.0% 95.0%
3832037 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 43.0 2.90e-01 98.3% 21.1%
5028315 330.7.1.0 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.53 42.0 3.97e-01 87.9% 74.3%
3386319 503.1.1.0 ↗ extended segments › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein 0.52 43.0 3.71e-01 98.3% 68.0%
3436081 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.51 40.0 3.84e-01 98.3% 80.8%