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KR131711.1__AKC57567.1__HMPREF1994_00008__00008
Bact-VirKR131711.1__AKC57567.1__HMPREF1994_00008__00008
Identity
- Accession:
- KR131711 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 131-226
Domain cluster:
rep: OP172705.1__WAX08764.1__BP742P1_00031__00031__D215-319
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.83 | 76.0 | 7.42e-01 | 100.0% | 94.2% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.81 | 74.0 | 7.15e-01 | 100.0% | 93.5% |
| 2fsdA00 | 2.60.40.2460 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage bIL170 RBP, head domain | 0.79 | 73.0 | 6.98e-01 | 100.0% | 98.2% |
| 2wstA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.78 | 71.0 | 5.80e-01 | 100.0% | 96.6% |
| 6g47A00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.76 | 69.0 | 5.66e-01 | 100.0% | 97.7% |
| 1uokA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.72 | 55.0 | 5.99e-01 | 100.0% | 100.0% |
| 7vt9A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.71 | 51.0 | 5.70e-01 | 96.9% | 100.0% |
| 5brqA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.70 | 55.0 | 5.90e-01 | 99.0% | 98.8% |
| 3edfA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 54.0 | 5.84e-01 | 99.0% | 98.8% |
| 2wc7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 50.0 | 5.42e-01 | 99.0% | 92.4% |
| 1m53A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 52.0 | 5.65e-01 | 100.0% | 100.0% |
| 2ze0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.68 | 52.0 | 5.68e-01 | 100.0% | 98.7% |
| 1cgtA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.68 | 56.0 | 5.68e-01 | 100.0% | 91.5% |
| 3m07A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.68 | 46.0 | 5.21e-01 | 100.0% | 97.1% |
| 5zceA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.67 | 51.0 | 5.57e-01 | 99.0% | 100.0% |
| 3dhuA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.67 | 49.0 | 5.41e-01 | 100.0% | 98.7% |
| 3aj7A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.67 | 50.0 | 5.48e-01 | 100.0% | 100.0% |
| 5do8B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 49.0 | 5.36e-01 | 100.0% | 97.4% |
| 4xb3A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 47.0 | 5.31e-01 | 100.0% | 100.0% |
| 1wzlA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 53.0 | 5.61e-01 | 100.0% | 100.0% |
| 4e2oA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 52.0 | 5.37e-01 | 100.0% | 93.2% |
| 1wzaA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 49.0 | 5.31e-01 | 100.0% | 98.7% |
| 5gxxA02 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.65 | 54.0 | 4.64e-01 | 91.7% | 70.7% |
| 6fmeA03 | 2.20.220.10 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › alpha-Amylases | 0.65 | 36.0 | 4.32e-01 | 100.0% | 83.9% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.64 | 35.0 | 3.26e-01 | 100.0% | 42.6% |
| 3wy2A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 46.0 | 5.08e-01 | 100.0% | 100.0% |
| 2wcoA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.63 | 55.0 | 5.23e-01 | 100.0% | 80.9% |
| 4aeeA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 41.0 | 4.69e-01 | 99.0% | 94.0% |
| 5e1qA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 56.0 | 5.64e-01 | 100.0% | 99.0% |
| 1lwjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 34.0 | 4.27e-01 | 96.9% | 100.0% |
| 4gklA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 51.0 | 5.27e-01 | 100.0% | 98.9% |
| 4j27A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 50.0 | 5.13e-01 | 99.0% | 95.5% |
| 1j0hA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 48.0 | 5.14e-01 | 100.0% | 97.6% |
| 3vgiA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.61 | 54.0 | 3.95e-01 | 100.0% | 95.6% |
| 6phxA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 53.0 | 5.33e-01 | 100.0% | 95.8% |
| 7plsA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 50.0 | 5.13e-01 | 99.0% | 97.8% |
| 1ulvA04 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 48.0 | 3.67e-01 | 92.7% | 64.4% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 50.0 | 3.70e-01 | 100.0% | 79.4% |
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 51.0 | 4.91e-01 | 97.9% | 85.5% |
| 5zbeA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 50.0 | 4.84e-01 | 97.9% | 87.9% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 32.0 | 3.59e-01 | 79.2% | 71.6% |
| 4w6yA00 | 2.60.120.1210 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 47.0 | 4.20e-01 | 100.0% | 77.4% |
| 2vmhA00 | 2.60.120.1060 | Mainly Beta › Sandwich › Jelly Rolls › NPCBM/NEW2 domain | 0.55 | 48.0 | 4.20e-01 | 100.0% | 99.3% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.54 | 30.0 | 3.38e-01 | 100.0% | 71.8% |
| 4hffA00 | 3.90.1720.70 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.53 | 34.0 | 2.95e-01 | 78.1% | 39.4% |
| 2pn5A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.87e-01 | 76.0% | 89.1% |
| 2iteA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 4.00e-01 | 92.7% | 76.9% |
| 1pzsA00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.51 | 46.0 | 3.79e-01 | 99.0% | 63.2% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588403 | 5092.1.1.0 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins | 0.88 | 83.0 | 8.09e-01 | 100.0% | 98.1% |
| 961561 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.82 | 76.0 | 7.43e-01 | 100.0% | 95.1% |
| 1156585 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.81 | 74.0 | 7.01e-01 | 100.0% | 88.5% |
| 2581425 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.78 | 36.0 | 4.72e-01 | 100.0% | 78.2% |
| 3941951 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.73 | 54.0 | 5.94e-01 | 99.0% | 100.0% |
| 2392274 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.72 | 47.0 | 5.32e-01 | 100.0% | 90.1% |
| 2771336 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.71 | 47.0 | 5.47e-01 | 100.0% | 97.0% |
| 4826520 | 12.1.1.53 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C_2 | 0.71 | 52.0 | 5.75e-01 | 97.9% | 100.0% |
| 2641390 | 12.1.1.75 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › SusG_C | 0.70 | 48.0 | 5.48e-01 | 100.0% | 100.0% |
| 1972 | 12.1.1.16 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Cyc-maltodext_C | 0.69 | 54.0 | 5.78e-01 | 99.0% | 96.3% |
| 1806777 | 12.1.1.53 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C_2 | 0.68 | 53.0 | 5.55e-01 | 100.0% | 94.1% |
| 1965 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.68 | 56.0 | 5.82e-01 | 100.0% | 97.8% |
| 5026277 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.68 | 42.0 | 5.10e-01 | 99.0% | 100.0% |
| 2775352 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.67 | 56.0 | 5.77e-01 | 100.0% | 97.8% |
| 1241441 | 12.1.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Malt_amylase_C | 0.66 | 48.0 | 5.31e-01 | 100.0% | 98.6% |
| 1963 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.65 | 49.0 | 5.31e-01 | 100.0% | 98.7% |
| 3822351 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.64 | 45.0 | 4.52e-01 | 100.0% | 72.6% |
| 2100983 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.64 | 50.0 | 5.19e-01 | 100.0% | 92.1% |
| 1105421 | 12.1.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C | 0.64 | 52.0 | 5.29e-01 | 100.0% | 90.6% |
| 3588218 | 12.1.1.75 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › SusG_C | 0.64 | 46.0 | 5.08e-01 | 100.0% | 98.7% |
| 2516697 | 12.1.1.18 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF3459 | 0.63 | 47.0 | 5.11e-01 | 100.0% | 98.7% |
| 2093579 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 49.0 | 5.24e-01 | 100.0% | 100.0% |
| 4888112 | 1.2.1.2 ↗ | beta barrels › cradle loop barrel › Capsid protein protrusion (P) domain › Capsid protein protrusion (P) domain › Calici_coat_C | 0.63 | 44.0 | 3.66e-01 | 72.9% | 100.0% |
| 1171323 | 12.1.1.57 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › SMMA_C | 0.63 | 41.0 | 4.73e-01 | 100.0% | 94.1% |
| 4602894 | 12.1.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Malt_amylase_C | 0.62 | 44.0 | 4.85e-01 | 100.0% | 97.3% |
| 4816119 | 12.1.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C | 0.60 | 52.0 | 5.05e-01 | 97.9% | 95.5% |
| 3206625 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 30.0 | 4.10e-01 | 100.0% | 100.0% |
| 4647293 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 48.0 | 4.76e-01 | 91.7% | 88.0% |
| 3247651 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 44.0 | 4.41e-01 | 91.7% | 83.0% |
| 3556731 | 11.1.1.92 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IFNGR1_D2 | 0.56 | 41.0 | 3.64e-01 | 79.2% | 71.7% |
| 5065774 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 47.0 | 4.68e-01 | 99.0% | 92.0% |
| 5058198 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.52 | 45.0 | 4.22e-01 | 100.0% | 80.8% |
| 3452139 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.51 | 44.0 | 3.20e-01 | 99.0% | 94.1% |
D2
medium
residues 73-130
Domain cluster:
rep: ON464762.1__UTV61177.1__JDFnp5_71__00071__D179-233